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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-let-7j

998 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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zgc:112182 ENSDART00000023388 Ubiquitin thioesterase OTU1 (EC 3.1.2.-). [Source:Uniprot/SWISSPROT;Acc:Q567B1]
19.3295 -22.82 0.0000000000000920453 266 6 3 8 [+] picture button
XR_029429.1 ENSDART00000074378 similar to LOC373796 protein (LOC797900), mRNA [Source:RefSeq_dna;Acc:XR_029429]
16.6099 -17.24 0.000000000000167919 700 6 1 7 [+] picture button
LOC559496 ENSDART00000090631 Uncharacterized aarF domain-containing protein kinase 1 precursor (EC 2.7.-.-). [Source:Uniprot/SWISSPROT;Acc:Q86TW2]Uncharacterized aarF domain-containing protein kinase 1 precursor (EC 2.7.-.-). [Source:Uniprot/SWISSPROT;Acc:Q86TW2] BY ORTHOLOGY TO:SINFRUT00000127853
16.0671 -16.07 0.00000000772334 700 6 1 7 [+] picture button
zgc:136578 ENSDART00000005727 hypothetical protein LOC678540 [Source:RefSeq_peptide;Acc:NP_001035389]
15.8047 -12.55 0.0000000213152 309 9 1 14 [+] picture button
pias4 ENSDART00000009601 protein inhibitor of activated STAT, 4 [Source:RefSeq_peptide;Acc:NP_998568]
16.2179 -18.63 0.0000000595665 700 6 1 6 [+] picture button
zgc:112077 ENSDART00000032118 hypothetical protein LOC550464 [Source:RefSeq_peptide;Acc:NP_001017767]
16.0665 -17.5 0.000000088528 797 8 3 17 [+] picture button
tarbp2 ENSDART00000103455 TAR (HIV) RNA binding protein 2 [Source:RefSeq_peptide;Acc:NP_956291]
17.6628 -19.43 0.0000000998851 747 6 1 8 [+] picture button
A2BHG4_DANRE ENSDART00000076845 Novel protein similar to vertebrate Fraser syndrome 1 homolog (Human) (FRAS1) (Fragment). [Source:Uniprot/SPTREMBL;Acc:A2BHG4]
17.1124 -18.51 0.000000169327 700 8 7 12 [+] picture button
gatm ENSDART00000052641 L-arginine:glycine amidinotransferase [Source:RefSeq_peptide;Acc:NP_955825]
15.9704 -17.55 0.000000333573 700 7 1 8 [+] picture button
LOC567864 ENSDART00000075967 zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161]zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161] BY ORTHOLOGY TO:ENSMODT00000012851
15.783 -14.28 0.000000352332 700 8 2 8 [+] picture button
LOC100006044 ENSDART00000057622 Fas apoptotic inhibitory molecule 2 (Lifeguard protein) (Transmembrane BAX inhibitor motif-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9BWQ8]Fas apoptotic inhibitory molecule 2 (Lifeguard protein) (Transmembrane BAX inhibitor motif-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9BWQ8] BY ORTHOLOGY TO:ENSOANT00000030498
15.9716 -18.74 0.000000460622 700 8 2 11 [+] picture button
arl8 ENSDART00000099121 ADP-ribosylation factor-like 8 [Source:RefSeq_peptide;Acc:NP_956118]
17.651 -26.52 0.000000615367 2177 4 1 4 [+] picture button
atp2a2a ENSDART00000086447 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 [Source:RefSeq_peptide;Acc:NP_957259]
17.5363 -22.26 0.000000701176 700 3 9 5 [+] picture button
acvr1b ENSDART00000023094 activin A receptor, type IB [Source:RefSeq_peptide;Acc:NP_571065]
17.4496 -21.54 0.000000822493 700 7 7 7 [+] picture button
LOC795159 ENSDART00000081460 UGNT. [Source:Uniprot/SPTREMBL;Acc:Q8AV24]UGNT. [Source:Uniprot/SPTREMBL;Acc:Q8AV24] BY ORTHOLOGY TO:SINFRUT00000160116
15.6976 -17.5 0.000000858875 700 9 1 10 [+] picture button
LOC100008537 ENSDART00000046613 vacuolar protein sorting-associated protein (vps13d)vacuolar protein sorting-associated protein (vps13d) BY ORTHOLOGY TO:AAEL007551-RA
16.062 -15.45 0.000000916993 700 5 1 10 [+] picture button
WDR7 ENSDART00000082419 WD repeat protein 7 (TGF-beta resistance-associated protein TRAG) (Rabconnectin-3 beta). [Source:Uniprot/SWISSPROT;Acc:Q9Y4E6]
16.1459 -16.23 0.000001 700 8 1 5 [+] picture button
ENSDART00000073410 NOT ANNOTATED
15.6605 -15.78 0.000001 700 6 1 4 [+] picture button
mhc1ze ENSDART00000040516 MHC class I antigen (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8MHA9]
15.7642 -20.2 0.000001 700 6 1 5 [+] picture button
ENSDART00000035573 NOT ANNOTATED
15.7642 -20.2 0.000001 700 11 1 5 [+] picture button
mhc1ze ENSDART00000105021 MHC class I antigen (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8MHB2]
16.5939 -23.77 0.000001 700 8 1 8 [+] picture button
LOC564859 ENSDART00000084855 Serine/threonine-protein kinase 40 (EC 2.7.11.1) (SINK-homologous serine/threonine-protein kinase). [Source:Uniprot/SWISSPROT;Acc:Q8N2I9]Serine/threonine-protein kinase 40 (EC 2.7.11.1) (SINK-homologous serine/threonine-protein kinase). [Source:Uniprot/SWISSPROT;Acc:Q8N2I9] BY ORTHOLOGY TO:ENSMODT00000022614
16.1267 -18.48 0.00000112523 700 9 1 12 [+] picture button
LOC563412 ENSDART00000021403 Eukaryotic translation initiation factor 2C 4 (eIF2C 4) (eIF-2C 4) (Argonaute-4). [Source:Uniprot/SWISSPROT;Acc:Q9HCK5]Eukaryotic translation initiation factor 2C 4 (eIF2C 4) (eIF-2C 4) (Argonaute-4). [Source:Uniprot/SWISSPROT;Acc:Q9HCK5] BY ORTHOLOGY TO:ENSORLT00000012382
16.8005 -18.71 0.00000122838 700 11 3 15 [+] picture button
zgc:158400 ENSDART00000079575 hypothetical protein LOC780844 [Source:RefSeq_peptide;Acc:NP_001073133]
16.3733 -15.31 0.00000148093 286 10 3 19 [+] picture button
prkcq ENSDART00000046253 si:ch211-239o15.1 [Source:RefSeq_peptide;Acc:NP_001082839]
15.7516 -14.55 0.00000180558 700 6 1 8 [+] picture button
smox ENSDART00000053685 Smox protein. [Source:Uniprot/SPTREMBL;Acc:Q6NYY8]
15.9967 -14.68 0.00000188441 369 10 5 18 [+] picture button
si:ch211-150c22.2 ENSDART00000062350 hypothetical protein LOC325430 [Source:RefSeq_peptide;Acc:NP_001006019]
15.6611 -17.06 0.00000223891 542 12 5 16 [+] picture button
zgc:63673 ENSDART00000058147 hypothetical protein LOC393452 [Source:RefSeq_peptide;Acc:NP_956774]
16.9418 -16.9 0.00000253117 216 4 5 7 [+] picture button
NFXL1 ENSDART00000102658 NF-X1-type zinc finger protein NFXL1 (Ovarian zinc finger protein) (hOZFP). [Source:Uniprot/SWISSPROT;Acc:Q6ZNB6]
15.8308 -15.89 0.00000348511 700 4 1 5 [+] picture button
gpr137bb ENSDART00000054183 G protein-coupled receptor 137bb [Source:RefSeq_peptide;Acc:NP_001002691]
17.0017 -18.35 0.00000487626 393 11 4 16 [+] picture button
snai3 ENSDART00000073549 snail homolog 3 [Source:RefSeq_peptide;Acc:NP_001070853]
15.9516 -14.76 0.00000523747 403 8 1 9 [+] picture button
Q0P412_DANRE ENSDART00000093123 LOC570901 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q0P412]
16.6891 -16.79 0.00000546033 491 12 4 13 [+] picture button
zgc:112259 ENSDART00000102430 Transmembrane protein 41A precursor. [Source:Uniprot/SWISSPROT;Acc:Q502G2]
15.9831 -17.5 0.00000665877 653 10 2 11 [+] picture button
si:dkey-177p2.14 ENSDART00000077782 hypothetical protein LOC566444 [Source:RefSeq_peptide;Acc:NP_001068583]
16.0549 -17.36 0.00000685389 540 8 2 13 [+] picture button
TMC3 ENSDART00000102468 Transmembrane channel-like protein 3. [Source:Uniprot/SWISSPROT;Acc:Q7Z5M5]
15.6605 -17.91 0.00000771544 700 8 2 11 [+] picture button
LOC100005590 ENSDART00000080155 Histamine H2 receptor (H2R) (Gastric receptor I). [Source:Uniprot/SWISSPROT;Acc:P25021]Histamine H2 receptor (H2R) (Gastric receptor I). [Source:Uniprot/SWISSPROT;Acc:P25021] BY ORTHOLOGY TO:ENSOANT00000014849
15.9012 -14.81 0.00000829686 700 4 1 6 [+] picture button
zgc:103539 ENSDART00000017968 hypothetical protein LOC449815 [Source:RefSeq_peptide;Acc:NP_001005988]
17.8853 -20.07 0.0000090791 497 7 2 8 [+] picture button
lypla3 ENSDART00000103807 Hypothetical protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1JPY0]
15.8559 -14.28 0.00000987682 700 6 1 6 [+] picture button
ets1b ENSDART00000045403 v-ets erythroblastosis virus E26 oncogene homolog 1b [Source:RefSeq_peptide;Acc:NP_001032452]
16.9354 -15.69 0.00000989128 301 10 2 16 [+] picture button
A0PJR6_DANRE ENSDART00000100411 Hypothetical protein. [Source:Uniprot/SPTREMBL;Acc:A0PJR6]
15.8679 -15.59 0.0000144769 700 5 1 7 [+] picture button
si:ch211-117l16.3 ENSDART00000028941 mitochondrial ribosomal protein S18A like [Source:RefSeq_peptide;Acc:NP_001025285]
16.487 -13.29 0.0000168228 246 7 5 11 [+] picture button
zgc:86613 ENSDART00000075672 hypothetical protein LOC415137 [Source:RefSeq_peptide;Acc:NP_001002047]
15.9308 -21.3 0.000017422 383 12 1 17 [+] picture button
zgc:158843 ENSDART00000091229 hypothetical protein LOC791205 [Source:RefSeq_peptide;Acc:NP_001074156]
15.6893 -13.5 0.0000189876 436 11 3 13 [+] picture button
fbxl14a ENSDART00000050029 F-box and leucine-rich repeat protein 14a [Source:RefSeq_peptide;Acc:NP_958890]
15.7344 -17 0.0000204223 700 7 1 7 [+] picture button
XR_029238.1 ENSDART00000074694 similar to putative beta-2 adrenergic receptor (LOC565838), mRNA [Source:RefSeq_dna;Acc:XR_029238]
15.7642 -14.98 0.0000210979 700 4 1 5 [+] picture button
LOC569190 ENSDART00000060866 Activin receptor type-2B precursor (EC 2.7.11.30) (Activin receptor type IIB) (ACTR-IIB). [Source:Uniprot/SWISSPROT;Acc:Q13705]Activin receptor type-2B precursor (EC 2.7.11.30) (Activin receptor type IIB) (ACTR-IIB). [Source:Uniprot/SWISSPROT;Acc:Q13705] BY ORTHOLOGY TO:ENSMODT00000011293
15.8939 -16.5 0.0000213481 700 10 2 12 [+] picture button
rbm19 ENSDART00000062459 RNA binding motif protein 19 [Source:RefSeq_peptide;Acc:NP_944597]
15.6669 -14.56 0.0000233101 446 5 3 9 [+] picture button
skap2 ENSDART00000052660 Src kinase-associated phosphoprotein 2 (Src family-associated phosphoprotein 2). [Source:Uniprot/SWISSPROT;Acc:Q6PG29]
17.8179 -19.69 0.0000270683 305 12 2 22 [+] picture button
si:ch211-147d7.1 ENSDART00000036546 hypothetical protein LOC562668 [Source:RefSeq_peptide;Acc:NP_001020694]
15.9527 -19.69 0.0000277757 700 3 1 3 [+] picture button
si:ch73-264b7.2 ENSDART00000105675 TPR repeat-containing protein C18orf17 homolog. [Source:Uniprot/SWISSPROT;Acc:Q1LXE6]
15.8679 -19.58 0.0000281638 700 5 7 9 [+] picture button

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Download table: GFF TXT
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