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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-let-7i

945 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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zgc:112182 ENSDART00000023388 Ubiquitin thioesterase OTU1 (EC 3.1.2.-). [Source:Uniprot/SWISSPROT;Acc:Q567B1]
19.8981 -27.13 9.20453e-14 266 6 3 8 [+] picture button
XR_029429.1 ENSDART00000074378 similar to LOC373796 protein (LOC797900), mRNA [Source:RefSeq_dna;Acc:XR_029429]
16.7143 -21.47 1.67919e-13 700 6 1 7 [+] picture button
tarbp2 ENSDART00000103455 TAR (HIV) RNA binding protein 2 [Source:RefSeq_peptide;Acc:NP_956291]
16.32 -14.07 9.98851e-08 747 6 1 8 [+] picture button
A2BHG4_DANRE ENSDART00000076845 Novel protein similar to vertebrate Fraser syndrome 1 homolog (Human) (FRAS1) (Fragment). [Source:Uniprot/SPTREMBL;Acc:A2BHG4]
16.5939 -21.36 1.69327e-07 700 8 7 12 [+] picture button
A2BIH4_DANRE ENSDART00000099848 Novel protein similar to vertebrate zinc finger protein 644 (ZNF644). [Source:Uniprot/SPTREMBL;Acc:A2BIH4]
16.1894 -19.78 2.7015e-07 700 5 2 8 [+] picture button
gatm ENSDART00000052641 L-arginine:glycine amidinotransferase [Source:RefSeq_peptide;Acc:NP_955825]
16.3879 -19.11 3.33573e-07 700 7 1 8 [+] picture button
LOC567864 ENSDART00000075967 zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161]zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161] BY ORTHOLOGY TO:ENSMODT00000012851
16.6137 -15.97 3.52332e-07 700 8 2 8 [+] picture button
arl8 ENSDART00000099121 ADP-ribosylation factor-like 8 [Source:RefSeq_peptide;Acc:NP_956118]
15.8859 -18.38 6.15367e-07 2177 4 1 4 [+] picture button
atp2a2a ENSDART00000086447 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 [Source:RefSeq_peptide;Acc:NP_957259]
16.7968 -18.45 7.01176e-07 700 3 9 5 [+] picture button
acvr1b ENSDART00000023094 activin A receptor, type IB [Source:RefSeq_peptide;Acc:NP_571065]
15.7877 -17.37 8.22493e-07 700 7 7 7 [+] picture button
WDR7 ENSDART00000082419 WD repeat protein 7 (TGF-beta resistance-associated protein TRAG) (Rabconnectin-3 beta). [Source:Uniprot/SWISSPROT;Acc:Q9Y4E6]
16.7144 -19.11 1e-06 700 8 1 5 [+] picture button
ENSDART00000073410 NOT ANNOTATED
16.3864 -19.08 1e-06 700 6 1 4 [+] picture button
mhc1ze ENSDART00000040516 MHC class I antigen (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8MHA9]
16.3864 -17.54 1e-06 700 6 1 5 [+] picture button
ENSDART00000035573 NOT ANNOTATED
16.3864 -21.52 1e-06 700 11 1 5 [+] picture button
mhc1ze ENSDART00000105021 MHC class I antigen (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8MHB2]
16.3864 -17.54 1e-06 700 8 1 8 [+] picture button
LOC564859 ENSDART00000084855 Serine/threonine-protein kinase 40 (EC 2.7.11.1) (SINK-homologous serine/threonine-protein kinase). [Source:Uniprot/SWISSPROT;Acc:Q8N2I9]Serine/threonine-protein kinase 40 (EC 2.7.11.1) (SINK-homologous serine/threonine-protein kinase). [Source:Uniprot/SWISSPROT;Acc:Q8N2I9] BY ORTHOLOGY TO:ENSMODT00000022614
15.8125 -15.64 1.12523e-06 700 9 1 12 [+] picture button
LOC563412 ENSDART00000021403 Eukaryotic translation initiation factor 2C 4 (eIF2C 4) (eIF-2C 4) (Argonaute-4). [Source:Uniprot/SWISSPROT;Acc:Q9HCK5]Eukaryotic translation initiation factor 2C 4 (eIF2C 4) (eIF-2C 4) (Argonaute-4). [Source:Uniprot/SWISSPROT;Acc:Q9HCK5] BY ORTHOLOGY TO:ENSORLT00000012382
16.4732 -15.26 1.22838e-06 700 11 3 15 [+] picture button
NP_001073985.1 ENSDART00000075765 similar to glutaredoxin cysteine-rich 1 protein [Source:RefSeq_peptide;Acc:NP_001073985]
16.3219 -15.58 1.80212e-06 700 14 2 16 [+] picture button
prkcq ENSDART00000046253 si:ch211-239o15.1 [Source:RefSeq_peptide;Acc:NP_001082839]
17.1077 -24.43 1.80558e-06 700 6 1 8 [+] picture button
smox ENSDART00000053685 Smox protein. [Source:Uniprot/SPTREMBL;Acc:Q6NYY8]
16.2189 -14.38 1.88441e-06 369 10 5 18 [+] picture button
acadvl ENSDART00000023089 acyl-Coenzyme A dehydrogenase, very long chain [Source:RefSeq_peptide;Acc:NP_997776]
16.9418 -18.47 1.95969e-06 239 4 1 12 [+] picture button
riok3 ENSDART00000098827 RIO kinase 3 [Source:RefSeq_peptide;Acc:NP_001003614]
16.1171 -20.69 2.7829e-06 700 6 1 13 [+] picture button
gpr137bb ENSDART00000054183 G protein-coupled receptor 137bb [Source:RefSeq_peptide;Acc:NP_001002691]
17.5573 -23.64 4.87626e-06 393 11 4 16 [+] picture button
foxh1 ENSDART00000078021 Forkhead box protein H1 (Forkhead activin signal transducer 1) (Fast- 1) (Schmalspur protein). [Source:Uniprot/SWISSPROT;Acc:Q9I9E1]
16.4324 -24.2 5.45783e-06 1503 2 3 3 [+] picture button
Q0P412_DANRE ENSDART00000093123 LOC570901 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q0P412]
16.1508 -15.39 5.46033e-06 491 12 4 13 [+] picture button
LOC570775 ENSDART00000083743 Eukaryotic translation initiation factor 2C 1 (eIF2C 1) (eIF-2C 1) (Argonaute-1) (Putative RNA-binding protein Q99). [Source:Uniprot/SWISSPROT;Acc:Q9UL18]Eukaryotic translation initiation factor 2C 1 (eIF2C 1) (eIF-2C 1) (Argonaute-1) (Putative RNA-binding protein Q99). [Source:Uniprot/SWISSPROT;Acc:Q9UL18] BY ORTHOLOGY TO:ENSMMUT00000008747
15.6798 -18.53 5.76524e-06 700 5 1 6 [+] picture button
zgc:92275 ENSDART00000049036 hypothetical protein LOC436885 [Source:RefSeq_peptide;Acc:NP_001002612]
15.691 -15.86 6.83096e-06 203 7 2 11 [+] picture button
zgc:152900 ENSDART00000074495 hypothetical protein LOC768170 [Source:RefSeq_peptide;Acc:NP_001070781]
17.1498 -21.38 7.51785e-06 618 3 1 4 [+] picture button
zgc:103539 ENSDART00000017968 hypothetical protein LOC449815 [Source:RefSeq_peptide;Acc:NP_001005988]
19.6092 -21.92 9.0791e-06 497 7 2 8 [+] picture button
ets1b ENSDART00000045403 v-ets erythroblastosis virus E26 oncogene homolog 1b [Source:RefSeq_peptide;Acc:NP_001032452]
16.9354 -13.94 9.89128e-06 301 10 2 16 [+] picture button
mt-atp6 ENSDART00000093612 ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6). [Source:Uniprot/SWISSPROT;Acc:Q9MIY5]
16.3596 -15.59 1.08263e-05 700 7 5 8 [+] picture button
zgc:110418 ENSDART00000021192 hypothetical protein LOC504083 [Source:RefSeq_peptide;Acc:NP_001025245]
15.9882 -17.62 1.12516e-05 651 5 1 7 [+] picture button
zgc:112443 ENSDART00000078523 hypothetical protein LOC550392 [Source:RefSeq_peptide;Acc:NP_001017697]
16.1254 -15.94 1.2184e-05 700 2 1 4 [+] picture button
A0PJR6_DANRE ENSDART00000100411 Hypothetical protein. [Source:Uniprot/SPTREMBL;Acc:A0PJR6]
15.8679 -18.11 1.44769e-05 700 5 1 7 [+] picture button
si:ch211-117l16.3 ENSDART00000028941 mitochondrial ribosomal protein S18A like [Source:RefSeq_peptide;Acc:NP_001025285]
16.8281 -12.39 1.68228e-05 246 7 5 11 [+] picture button
zgc:86613 ENSDART00000075672 hypothetical protein LOC415137 [Source:RefSeq_peptide;Acc:NP_001002047]
15.8202 -14.42 1.7422e-05 383 12 1 17 [+] picture button
fbxl14a ENSDART00000050029 F-box and leucine-rich repeat protein 14a [Source:RefSeq_peptide;Acc:NP_958890]
15.7344 -16.9 2.04223e-05 700 7 1 7 [+] picture button
zgc:109979 ENSDART00000046172 hypothetical protein LOC553178 [Source:RefSeq_peptide;Acc:NP_001018135]
15.8994 -23.63 2.27733e-05 700 7 2 6 [+] picture button
rbm19 ENSDART00000062459 RNA binding motif protein 19 [Source:RefSeq_peptide;Acc:NP_944597]
15.8845 -18.53 2.33101e-05 446 5 3 9 [+] picture button
cyc1 ENSDART00000055504 hypothetical protein LOC564379 [Source:RefSeq_peptide;Acc:NP_001032470]
16.8309 -24.29 2.3453e-05 358 9 1 9 [+] picture button
skap2 ENSDART00000052660 Src kinase-associated phosphoprotein 2 (Src family-associated phosphoprotein 2). [Source:Uniprot/SWISSPROT;Acc:Q6PG29]
18.3854 -23.4 2.70683e-05 305 12 2 22 [+] picture button
zgc:66100 ENSDART00000013814 hypothetical protein LOC393553 [Source:RefSeq_peptide;Acc:NP_956875]
15.8886 -13.37 2.9894e-05 347 6 3 9 [+] picture button
coe2 ENSDART00000014822 Transcription factor COE2. [Source:Uniprot/SWISSPROT;Acc:O93375]
16.1715 -18.02 3.01059e-05 756 5 1 7 [+] picture button
LOC559531 ENSDART00000076156 Max-interacting transcriptional repressor MAD4 (Max-associated protein 4) (MAX dimerization protein 4). [Source:Uniprot/SWISSPROT;Acc:Q14582]Max-interacting transcriptional repressor MAD4 (Max-associated protein 4) (MAX dimerization protein 4). [Source:Uniprot/SWISSPROT;Acc:Q14582] BY ORTHOLOGY TO:SINFRUT00000153473
15.783 -17.81 3.08579e-05 700 6 2 8 [+] picture button
zgc:66295 ENSDART00000005899 hypothetical protein LOC393489 [Source:RefSeq_peptide;Acc:NP_956811]
15.691 -15.52 3.0881e-05 277 8 2 19 [+] picture button
LOC564926 ENSDART00000081152 centrosomal protein 76 [Source:MarkerSymbol;Acc:MGI:1923401]centrosomal protein 76 [Source:MarkerSymbol;Acc:MGI:1923401] BY ORTHOLOGY TO:ENSMUST00000097542
16.2442 -17.62 3.23473e-05 700 6 1 13 [+] picture button
XR_029515.1 ENSDART00000012484 hypothetical protein LOC798974 (LOC798974), mRNA [Source:RefSeq_dna;Acc:XR_029515]
17.9651 -18.1 3.56879e-05 700 8 1 11 [+] picture button
pax6b ENSDART00000067248 paired box gene 6b [Source:RefSeq_peptide;Acc:NP_571716]
16.0322 -12.89 3.80639e-05 163 6 4 9 [+] picture button
ccna1 ENSDART00000002166 cyclin A1 [Source:RefSeq_peptide;Acc:NP_997983]
16.5128 -13.22 4.18261e-05 377 10 6 26 [+] picture button
si:ch211-234g24.3 ENSDART00000086530 Novel protein similar to vertebrate SH3KBP1 binding protein 1 (SHKBP1) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1L992]
15.7368 -23.54 4.37529e-05 700 8 2 8 [+] picture button

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Download table: GFF TXT
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