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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-let-7g

903 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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zgc:112182 ENSDART00000023388 Ubiquitin thioesterase OTU1 (EC 3.1.2.-). [Source:Uniprot/SWISSPROT;Acc:Q567B1]
18.9884 -20.84 9.20453e-14 266 6 3 8 [+] picture button
XR_029429.1 ENSDART00000074378 similar to LOC373796 protein (LOC797900), mRNA [Source:RefSeq_dna;Acc:XR_029429]
15.8786 -17.24 1.67919e-13 700 6 1 7 [+] picture button
zgc:112077 ENSDART00000032118 hypothetical protein LOC550464 [Source:RefSeq_peptide;Acc:NP_001017767]
15.7595 -16.18 8.8528e-08 797 8 3 17 [+] picture button
tarbp2 ENSDART00000103455 TAR (HIV) RNA binding protein 2 [Source:RefSeq_peptide;Acc:NP_956291]
16.5266 -15.1 9.98851e-08 747 6 1 8 [+] picture button
A2BHG4_DANRE ENSDART00000076845 Novel protein similar to vertebrate Fraser syndrome 1 homolog (Human) (FRAS1) (Fragment). [Source:Uniprot/SPTREMBL;Acc:A2BHG4]
16.5939 -19 1.69327e-07 700 8 7 12 [+] picture button
A2BIH4_DANRE ENSDART00000099848 Novel protein similar to vertebrate zinc finger protein 644 (ZNF644). [Source:Uniprot/SPTREMBL;Acc:A2BIH4]
15.7716 -16.36 2.7015e-07 700 5 2 8 [+] picture button
gatm ENSDART00000052641 L-arginine:glycine amidinotransferase [Source:RefSeq_peptide;Acc:NP_955825]
16.1791 -15.85 3.33573e-07 700 7 1 8 [+] picture button
LOC567864 ENSDART00000075967 zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161]zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161] BY ORTHOLOGY TO:ENSMODT00000012851
16.3022 -14.9 3.52332e-07 700 8 2 8 [+] picture button
LOC100006044 ENSDART00000057622 Fas apoptotic inhibitory molecule 2 (Lifeguard protein) (Transmembrane BAX inhibitor motif-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9BWQ8]Fas apoptotic inhibitory molecule 2 (Lifeguard protein) (Transmembrane BAX inhibitor motif-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9BWQ8] BY ORTHOLOGY TO:ENSOANT00000030498
15.9716 -18.52 4.60622e-07 700 8 2 11 [+] picture button
arl8 ENSDART00000099121 ADP-ribosylation factor-like 8 [Source:RefSeq_peptide;Acc:NP_956118]
16.6291 -21.52 6.15367e-07 2177 4 1 4 [+] picture button
atp2a2a ENSDART00000086447 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 [Source:RefSeq_peptide;Acc:NP_957259]
17.5363 -16.17 7.01176e-07 700 3 9 5 [+] picture button
acvr1b ENSDART00000023094 activin A receptor, type IB [Source:RefSeq_peptide;Acc:NP_571065]
16.6187 -19.55 8.22493e-07 700 7 7 7 [+] picture button
WDR7 ENSDART00000082419 WD repeat protein 7 (TGF-beta resistance-associated protein TRAG) (Rabconnectin-3 beta). [Source:Uniprot/SWISSPROT;Acc:Q9Y4E6]
17.624 -19.18 1e-06 700 8 1 5 [+] picture button
mhc1ze ENSDART00000040516 MHC class I antigen (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8MHA9]
15.7642 -20.33 1e-06 700 6 1 5 [+] picture button
mhc1ze ENSDART00000105021 MHC class I antigen (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8MHB2]
16.5939 -22.15 1e-06 700 8 1 8 [+] picture button
LOC564859 ENSDART00000084855 Serine/threonine-protein kinase 40 (EC 2.7.11.1) (SINK-homologous serine/threonine-protein kinase). [Source:Uniprot/SWISSPROT;Acc:Q8N2I9]Serine/threonine-protein kinase 40 (EC 2.7.11.1) (SINK-homologous serine/threonine-protein kinase). [Source:Uniprot/SWISSPROT;Acc:Q8N2I9] BY ORTHOLOGY TO:ENSMODT00000022614
15.9173 -16.31 1.12523e-06 700 9 1 12 [+] picture button
LOC563412 ENSDART00000021403 Eukaryotic translation initiation factor 2C 4 (eIF2C 4) (eIF-2C 4) (Argonaute-4). [Source:Uniprot/SWISSPROT;Acc:Q9HCK5]Eukaryotic translation initiation factor 2C 4 (eIF2C 4) (eIF-2C 4) (Argonaute-4). [Source:Uniprot/SWISSPROT;Acc:Q9HCK5] BY ORTHOLOGY TO:ENSORLT00000012382
17.6733 -18.4 1.22838e-06 700 11 3 15 [+] picture button
zgc:158400 ENSDART00000079575 hypothetical protein LOC780844 [Source:RefSeq_peptide;Acc:NP_001073133]
16.0322 -14.91 1.48093e-06 286 10 3 19 [+] picture button
NP_001073985.1 ENSDART00000075765 similar to glutaredoxin cysteine-rich 1 protein [Source:RefSeq_peptide;Acc:NP_001073985]
16.01 -12.36 1.80212e-06 700 14 2 16 [+] picture button
prkcq ENSDART00000046253 si:ch211-239o15.1 [Source:RefSeq_peptide;Acc:NP_001082839]
16.5862 -19.8 1.80558e-06 700 6 1 8 [+] picture button
acadvl ENSDART00000023089 acyl-Coenzyme A dehydrogenase, very long chain [Source:RefSeq_peptide;Acc:NP_997776]
15.8047 -13.91 1.95969e-06 239 4 1 12 [+] picture button
C4orf8 ENSDART00000053162 Uncharacterized protein C4orf8 (Protein IT14). [Source:Uniprot/SWISSPROT;Acc:P78312]
15.7319 -15.13 2.34134e-06 700 5 2 6 [+] picture button
zgc:63673 ENSDART00000058147 hypothetical protein LOC393452 [Source:RefSeq_peptide;Acc:NP_956774]
16.9418 -15.66 2.53117e-06 216 4 5 7 [+] picture button
gpr137bb ENSDART00000054183 G protein-coupled receptor 137bb [Source:RefSeq_peptide;Acc:NP_001002691]
16.6683 -16.91 4.87626e-06 393 11 4 16 [+] picture button
foxh1 ENSDART00000078021 Forkhead box protein H1 (Forkhead activin signal transducer 1) (Fast- 1) (Schmalspur protein). [Source:Uniprot/SWISSPROT;Acc:Q9I9E1]
16.1441 -21.92 5.45783e-06 1503 2 3 3 [+] picture button
Q0P412_DANRE ENSDART00000093123 LOC570901 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q0P412]
15.8277 -14.58 5.46033e-06 491 12 4 13 [+] picture button
zgc:103539 ENSDART00000017968 hypothetical protein LOC449815 [Source:RefSeq_peptide;Acc:NP_001005988]
18.9627 -21.58 9.0791e-06 497 7 2 8 [+] picture button
ets1b ENSDART00000045403 v-ets erythroblastosis virus E26 oncogene homolog 1b [Source:RefSeq_peptide;Acc:NP_001032452]
16.9354 -12.88 9.89128e-06 301 10 2 16 [+] picture button
mt-atp6 ENSDART00000093612 ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6). [Source:Uniprot/SWISSPROT;Acc:Q9MIY5]
16.6722 -16.32 1.08263e-05 700 7 5 8 [+] picture button
zgc:110418 ENSDART00000021192 hypothetical protein LOC504083 [Source:RefSeq_peptide;Acc:NP_001025245]
15.9882 -16.37 1.12516e-05 651 5 1 7 [+] picture button
NP_001073649.1 ENSDART00000077389 zinc finger protein 148 [Source:RefSeq_peptide;Acc:NP_001073649]
16.0976 -16.6 1.14874e-05 610 12 11 20 [+] picture button
gsc ENSDART00000082085 Homeobox protein goosecoid (ZGSC). [Source:Uniprot/SWISSPROT;Acc:P53544]
15.8945 -14.92 1.16662e-05 391 7 2 12 [+] picture button
zgc:112443 ENSDART00000078523 hypothetical protein LOC550392 [Source:RefSeq_peptide;Acc:NP_001017697]
16.1254 -14.18 1.2184e-05 700 2 1 4 [+] picture button
si:ch211-117l16.3 ENSDART00000028941 mitochondrial ribosomal protein S18A like [Source:RefSeq_peptide;Acc:NP_001025285]
16.8281 -12.88 1.68228e-05 246 7 5 11 [+] picture button
fbxl14a ENSDART00000050029 F-box and leucine-rich repeat protein 14a [Source:RefSeq_peptide;Acc:NP_958890]
15.7344 -17 2.04223e-05 700 7 1 7 [+] picture button
LOC569190 ENSDART00000060866 Activin receptor type-2B precursor (EC 2.7.11.30) (Activin receptor type IIB) (ACTR-IIB). [Source:Uniprot/SWISSPROT;Acc:Q13705]Activin receptor type-2B precursor (EC 2.7.11.30) (Activin receptor type IIB) (ACTR-IIB). [Source:Uniprot/SWISSPROT;Acc:Q13705] BY ORTHOLOGY TO:ENSMODT00000011293
15.8939 -17.33 2.13481e-05 700 10 2 12 [+] picture button
cyc1 ENSDART00000055504 hypothetical protein LOC564379 [Source:RefSeq_peptide;Acc:NP_001032470]
16.4965 -20.45 2.3453e-05 358 9 1 9 [+] picture button
skap2 ENSDART00000052660 Src kinase-associated phosphoprotein 2 (Src family-associated phosphoprotein 2). [Source:Uniprot/SWISSPROT;Acc:Q6PG29]
17.8179 -19.69 2.70683e-05 305 12 2 22 [+] picture button
coe2 ENSDART00000014822 Transcription factor COE2. [Source:Uniprot/SWISSPROT;Acc:O93375]
17.0985 -18.53 3.01059e-05 756 5 1 7 [+] picture button
LOC559531 ENSDART00000076156 Max-interacting transcriptional repressor MAD4 (Max-associated protein 4) (MAX dimerization protein 4). [Source:Uniprot/SWISSPROT;Acc:Q14582]Max-interacting transcriptional repressor MAD4 (Max-associated protein 4) (MAX dimerization protein 4). [Source:Uniprot/SWISSPROT;Acc:Q14582] BY ORTHOLOGY TO:SINFRUT00000153473
16.9252 -17.17 3.08579e-05 700 6 2 8 [+] picture button
zgc:66295 ENSDART00000005899 hypothetical protein LOC393489 [Source:RefSeq_peptide;Acc:NP_956811]
15.8047 -13.09 3.0881e-05 277 8 2 19 [+] picture button
XR_029515.1 ENSDART00000012484 hypothetical protein LOC798974 (LOC798974), mRNA [Source:RefSeq_dna;Acc:XR_029515]
17.1692 -15.6 3.56879e-05 700 8 1 11 [+] picture button
NP_001077298.1 ENSDART00000085304 hypothetical protein LOC559556 [Source:RefSeq_peptide;Acc:NP_001077298]
16.1257 -17.55 3.75767e-05 700 8 2 10 [+] picture button
pax6b ENSDART00000067248 paired box gene 6b [Source:RefSeq_peptide;Acc:NP_571716]
16.0322 -11.59 3.80639e-05 163 6 4 9 [+] picture button
ccna1 ENSDART00000002166 cyclin A1 [Source:RefSeq_peptide;Acc:NP_997983]
16.0635 -13.38 4.18261e-05 377 10 6 26 [+] picture button
st8sia6 ENSDART00000009568 Alpha-2,8-sialyltransferase ST8Sia VI (EC 2.4.99.8) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6KBZ7]
16.5939 -18.92 4.6683e-05 700 5 2 8 [+] picture button
wu:fi75b02 ENSDART00000005158 Wu:fi75b02 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6PFP0]
16.6162 -21.83 4.77059e-05 776 7 6 7 [+] picture button
Q6P6X8_DANRE ENSDART00000042944 Asxl1 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6P6X8]
15.7241 -16.4 4.87137e-05 596 9 1 18 [+] picture button
SREBF2 ENSDART00000092690 Sterol regulatory element-binding protein 2 (SREBP-2) (Sterol regulatory element-binding transcription factor 2). [Source:Uniprot/SWISSPROT;Acc:Q12772]
16.5694 -14.07 5.35233e-05 700 8 1 11 [+] picture button
LOC556921 ENSDART00000092190 ADP-ribosylation factor-like protein 14 (ADP-ribosylation factor 7). [Source:Uniprot/SWISSPROT;Acc:Q8N4G2]ADP-ribosylation factor-like protein 14 (ADP-ribosylation factor 7). [Source:Uniprot/SWISSPROT;Acc:Q8N4G2] BY ORTHOLOGY TO:ENSGALT00000015530
16.8264 -18.14 5.43878e-05 700 3 1 3 [+] picture button

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Download table: GFF TXT
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