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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-let-7f

907 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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zgc:112182 ENSDART00000023388 Ubiquitin thioesterase OTU1 (EC 3.1.2.-). [Source:Uniprot/SWISSPROT;Acc:Q567B1]
19.8981 -24.97 9.20453e-14 266 6 3 8 [+] picture button
XR_029429.1 ENSDART00000074378 similar to LOC373796 protein (LOC797900), mRNA [Source:RefSeq_dna;Acc:XR_029429]
16.7143 -16.96 1.67919e-13 700 6 1 7 [+] picture button
zgc:112077 ENSDART00000032118 hypothetical protein LOC550464 [Source:RefSeq_peptide;Acc:NP_001017767]
15.7595 -14.46 8.8528e-08 797 8 3 17 [+] picture button
tarbp2 ENSDART00000103455 TAR (HIV) RNA binding protein 2 [Source:RefSeq_peptide;Acc:NP_956291]
15.9069 -18.43 9.98851e-08 747 6 1 8 [+] picture button
A2BHG4_DANRE ENSDART00000076845 Novel protein similar to vertebrate Fraser syndrome 1 homolog (Human) (FRAS1) (Fragment). [Source:Uniprot/SPTREMBL;Acc:A2BHG4]
16.5939 -19 1.69327e-07 700 8 7 12 [+] picture button
A2BIH4_DANRE ENSDART00000099848 Novel protein similar to vertebrate zinc finger protein 644 (ZNF644). [Source:Uniprot/SPTREMBL;Acc:A2BIH4]
15.6672 -15.55 2.7015e-07 700 5 2 8 [+] picture button
si:ch211-194d6.2 ENSDART00000000566 hypothetical protein LOC567899 [Source:RefSeq_peptide;Acc:NP_001038610]
15.6605 -17.53 3.54359e-07 700 7 1 12 [+] picture button
arl8 ENSDART00000099121 ADP-ribosylation factor-like 8 [Source:RefSeq_peptide;Acc:NP_956118]
15.8859 -17.96 6.15367e-07 2177 4 1 4 [+] picture button
atp2a2a ENSDART00000086447 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 [Source:RefSeq_peptide;Acc:NP_957259]
17.0081 -16.15 7.01176e-07 700 3 9 5 [+] picture button
LOC796380 ENSDART00000083129 translation initiation factor 3, subunit S9, putativetranslation initiation factor 3, subunit S9, putative BY ORTHOLOGY TO:AAEL007718-RA
15.6957 -18.21 7.73218e-07 700 7 1 10 [+] picture button
acvr1b ENSDART00000023094 activin A receptor, type IB [Source:RefSeq_peptide;Acc:NP_571065]
15.7877 -18.66 8.22493e-07 700 7 7 7 [+] picture button
WDR7 ENSDART00000082419 WD repeat protein 7 (TGF-beta resistance-associated protein TRAG) (Rabconnectin-3 beta). [Source:Uniprot/SWISSPROT;Acc:Q9Y4E6]
18.5336 -20.82 1e-06 700 8 1 5 [+] picture button
mhc1ze ENSDART00000040516 MHC class I antigen (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8MHA9]
15.6605 -16.88 1e-06 700 6 1 5 [+] picture button
ENSDART00000035573 NOT ANNOTATED
16.3864 -15.86 1e-06 700 11 1 5 [+] picture button
mhc1ze ENSDART00000105021 MHC class I antigen (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8MHB2]
16.0753 -21.27 1e-06 700 8 1 8 [+] picture button
LOC563412 ENSDART00000021403 Eukaryotic translation initiation factor 2C 4 (eIF2C 4) (eIF-2C 4) (Argonaute-4). [Source:Uniprot/SWISSPROT;Acc:Q9HCK5]Eukaryotic translation initiation factor 2C 4 (eIF2C 4) (eIF-2C 4) (Argonaute-4). [Source:Uniprot/SWISSPROT;Acc:Q9HCK5] BY ORTHOLOGY TO:ENSORLT00000012382
16.8005 -17.69 1.22838e-06 700 11 3 15 [+] picture button
vac14 ENSDART00000009767 vac14 homolog [Source:RefSeq_peptide;Acc:NP_001004650]
16.421 -14.73 1.3666e-06 490 6 2 6 [+] picture button
zgc:158400 ENSDART00000079575 hypothetical protein LOC780844 [Source:RefSeq_peptide;Acc:NP_001073133]
16.9418 -19.7 1.48093e-06 286 10 3 19 [+] picture button
NP_001073985.1 ENSDART00000075765 similar to glutaredoxin cysteine-rich 1 protein [Source:RefSeq_peptide;Acc:NP_001073985]
16.01 -12.36 1.80212e-06 700 14 2 16 [+] picture button
prkcq ENSDART00000046253 si:ch211-239o15.1 [Source:RefSeq_peptide;Acc:NP_001082839]
15.9603 -19.53 1.80558e-06 700 6 1 8 [+] picture button
acadvl ENSDART00000023089 acyl-Coenzyme A dehydrogenase, very long chain [Source:RefSeq_peptide;Acc:NP_997776]
15.691 -12.58 1.95969e-06 239 4 1 12 [+] picture button
C4orf8 ENSDART00000053162 Uncharacterized protein C4orf8 (Protein IT14). [Source:Uniprot/SWISSPROT;Acc:P78312]
15.7319 -15.09 2.34134e-06 700 5 2 6 [+] picture button
zgc:63673 ENSDART00000058147 hypothetical protein LOC393452 [Source:RefSeq_peptide;Acc:NP_956774]
16.9418 -16.32 2.53117e-06 216 4 5 7 [+] picture button
riok3 ENSDART00000098827 RIO kinase 3 [Source:RefSeq_peptide;Acc:NP_001003614]
16.1171 -14.51 2.7829e-06 700 6 1 13 [+] picture button
gpr137bb ENSDART00000054183 G protein-coupled receptor 137bb [Source:RefSeq_peptide;Acc:NP_001002691]
16.6683 -16.91 4.87626e-06 393 11 4 16 [+] picture button
foxh1 ENSDART00000078021 Forkhead box protein H1 (Forkhead activin signal transducer 1) (Fast- 1) (Schmalspur protein). [Source:Uniprot/SWISSPROT;Acc:Q9I9E1]
16.048 -20.66 5.45783e-06 1503 2 3 3 [+] picture button
LOC570775 ENSDART00000083743 Eukaryotic translation initiation factor 2C 1 (eIF2C 1) (eIF-2C 1) (Argonaute-1) (Putative RNA-binding protein Q99). [Source:Uniprot/SWISSPROT;Acc:Q9UL18]Eukaryotic translation initiation factor 2C 1 (eIF2C 1) (eIF-2C 1) (Argonaute-1) (Putative RNA-binding protein Q99). [Source:Uniprot/SWISSPROT;Acc:Q9UL18] BY ORTHOLOGY TO:ENSMMUT00000008747
15.7843 -14.23 5.76524e-06 700 5 1 6 [+] picture button
plk4 ENSDART00000043866 Plk4 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q7ZVS3]
15.9185 -11.79 7.24355e-06 284 8 3 13 [+] picture button
zgc:162153 ENSDART00000087457 hypothetical protein LOC100037312 [Source:RefSeq_peptide;Acc:NP_001082938]
15.6605 -14.61 7.64886e-06 700 4 1 4 [+] picture button
A5A8K2_DANRE ENSDART00000087002 CK2-interacting protein-1 (Fragment). [Source:Uniprot/SPTREMBL;Acc:A5A8K2]
15.6978 -20.21 8.9936e-06 459 8 1 13 [+] picture button
zgc:103539 ENSDART00000017968 hypothetical protein LOC449815 [Source:RefSeq_peptide;Acc:NP_001005988]
18.1008 -18.14 9.0791e-06 497 7 2 8 [+] picture button
ets1b ENSDART00000045403 v-ets erythroblastosis virus E26 oncogene homolog 1b [Source:RefSeq_peptide;Acc:NP_001032452]
16.8217 -12.88 9.89128e-06 301 10 2 16 [+] picture button
mt-atp6 ENSDART00000093612 ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6). [Source:Uniprot/SWISSPROT;Acc:Q9MIY5]
17.5058 -17.92 1.08263e-05 700 7 5 8 [+] picture button
NP_001073649.1 ENSDART00000077389 zinc finger protein 148 [Source:RefSeq_peptide;Acc:NP_001073649]
16.9393 -20.04 1.14874e-05 610 12 11 20 [+] picture button
si:ch211-222e23.8 ENSDART00000089540 Novel protein similar to vertebrate SAC1 suppressor of actin mutations 1-like (Yeast) (SACM1L). [Source:Uniprot/SPTREMBL;Acc:Q1L8A6]
15.6605 -19.4 1.18362e-05 700 8 3 10 [+] picture button
zgc:112443 ENSDART00000078523 hypothetical protein LOC550392 [Source:RefSeq_peptide;Acc:NP_001017697]
16.9742 -15.08 1.2184e-05 700 2 1 4 [+] picture button
vps29 ENSDART00000101246 vacuolar protein sorting 29 [Source:RefSeq_peptide;Acc:NP_956331]
16.4317 -15.71 1.34699e-05 309 6 1 12 [+] picture button
rbpms2 ENSDART00000024062 Cytoplasmic polyadenylation element-binding protein 1 (CPE-binding protein 1) (CPE-BP1) (CPEB-1) (Protein Zorba) (Zebrafish orb-type a) (ZOR-1) (Orb/CPEB-related RNA-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q9YGX5]
15.8357 -17.05 1.53383e-05 1068 6 9 7 [+] picture button
si:ch211-117l16.3 ENSDART00000028941 mitochondrial ribosomal protein S18A like [Source:RefSeq_peptide;Acc:NP_001025285]
17.7377 -12.7 1.68228e-05 246 7 5 11 [+] picture button
mrpl23 ENSDART00000067179 Mitochondrial 39S ribosomal protein L23 (L23mt) (MRP-L23). [Source:Uniprot/SWISSPROT;Acc:Q6IQS9]
16.1654 -23.56 1.93405e-05 551 8 1 11 [+] picture button
fbxl14a ENSDART00000050029 F-box and leucine-rich repeat protein 14a [Source:RefSeq_peptide;Acc:NP_958890]
16.568 -18 2.04223e-05 700 7 1 7 [+] picture button
LOC565200 ENSDART00000050682 Signal transducer and activator of transcription 2 (p113). [Source:Uniprot/SWISSPROT;Acc:P52630]Signal transducer and activator of transcription 2 (p113). [Source:Uniprot/SWISSPROT;Acc:P52630] BY ORTHOLOGY TO:ENSMMUT00000001167
15.8761 -22.14 2.37561e-05 700 5 1 6 [+] picture button
skap2 ENSDART00000052660 Src kinase-associated phosphoprotein 2 (Src family-associated phosphoprotein 2). [Source:Uniprot/SWISSPROT;Acc:Q6PG29]
17.2505 -15.74 2.70683e-05 305 12 2 22 [+] picture button
abcc2 ENSDART00000016604 ATP-binding cassette, sub-family C (CFTR/MRP), member 2 [Source:RefSeq_peptide;Acc:NP_956883]
16.3733 -12.32 2.80188e-05 192 2 1 2 [+] picture button
zgc:66100 ENSDART00000013814 hypothetical protein LOC393553 [Source:RefSeq_peptide;Acc:NP_956875]
16.1156 -14.58 2.9894e-05 347 6 3 9 [+] picture button
coe2 ENSDART00000014822 Transcription factor COE2. [Source:Uniprot/SWISSPROT;Acc:O93375]
16.2745 -15.87 3.01059e-05 756 5 1 7 [+] picture button
LOC559531 ENSDART00000076156 Max-interacting transcriptional repressor MAD4 (Max-associated protein 4) (MAX dimerization protein 4). [Source:Uniprot/SWISSPROT;Acc:Q14582]Max-interacting transcriptional repressor MAD4 (Max-associated protein 4) (MAX dimerization protein 4). [Source:Uniprot/SWISSPROT;Acc:Q14582] BY ORTHOLOGY TO:SINFRUT00000153473
16.0945 -14.49 3.08579e-05 700 6 2 8 [+] picture button
zgc:66295 ENSDART00000005899 hypothetical protein LOC393489 [Source:RefSeq_peptide;Acc:NP_956811]
16.3733 -17.01 3.0881e-05 277 8 2 19 [+] picture button
zgc:110727 ENSDART00000074622 hypothetical protein LOC407653 [Source:RefSeq_peptide;Acc:NP_999947]
15.9185 -10.17 3.27394e-05 167 2 1 2 [+] picture button
XR_029515.1 ENSDART00000012484 hypothetical protein LOC798974 (LOC798974), mRNA [Source:RefSeq_dna;Acc:XR_029515]
16.2596 -12.01 3.56879e-05 700 8 1 11 [+] picture button

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Download table: GFF TXT
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