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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-let-7e

877 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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zgc:112182 ENSDART00000023388 Ubiquitin thioesterase OTU1 (EC 3.1.2.-). [Source:Uniprot/SWISSPROT;Acc:Q567B1]
18.9884 -21.66 9.20453e-14 266 6 3 8 [+] picture button
XR_029429.1 ENSDART00000074378 similar to LOC373796 protein (LOC797900), mRNA [Source:RefSeq_dna;Acc:XR_029429]
16.6099 -16.96 1.67919e-13 700 6 1 7 [+] picture button
A2BHG4_DANRE ENSDART00000076845 Novel protein similar to vertebrate Fraser syndrome 1 homolog (Human) (FRAS1) (Fragment). [Source:Uniprot/SPTREMBL;Acc:A2BHG4]
15.7642 -17.16 1.69327e-07 700 8 7 12 [+] picture button
zgc:55259 ENSDART00000010040 hypothetical protein LOC338155 [Source:RefSeq_peptide;Acc:NP_956369]
15.8888 -12.83 1.91164e-07 669 6 1 6 [+] picture button
LOC567864 ENSDART00000075967 zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161]zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161] BY ORTHOLOGY TO:ENSMODT00000012851
16.406 -16.68 3.52332e-07 700 8 2 8 [+] picture button
si:ch211-194d6.2 ENSDART00000000566 hypothetical protein LOC567899 [Source:RefSeq_peptide;Acc:NP_001038610]
15.6605 -18.83 3.54359e-07 700 7 1 12 [+] picture button
arl8 ENSDART00000099121 ADP-ribosylation factor-like 8 [Source:RefSeq_peptide;Acc:NP_956118]
15.8859 -18.79 6.15367e-07 2177 4 1 4 [+] picture button
atp2a2a ENSDART00000086447 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 [Source:RefSeq_peptide;Acc:NP_957259]
16.163 -14.93 7.01176e-07 700 3 9 5 [+] picture button
LOC796380 ENSDART00000083129 translation initiation factor 3, subunit S9, putativetranslation initiation factor 3, subunit S9, putative BY ORTHOLOGY TO:AAEL007718-RA
16.2154 -20.38 7.73218e-07 700 7 1 10 [+] picture button
LOC799891 ENSDART00000003293 Midline-2 (Midline defect 2) (Tripartite motif-containing protein 1) (Midin-2) (RING finger protein 60). [Source:Uniprot/SWISSPROT;Acc:Q9UJV3]Midline-2 (Midline defect 2) (Tripartite motif-containing protein 1) (Midin-2) (RING finger protein 60). [Source:Uniprot/SWISSPROT;Acc:Q9UJV3] BY ORTHOLOGY TO:ENSCAFT00000028577
16.3864 -17.18 8.32688e-07 700 4 1 5 [+] picture button
LOC100008537 ENSDART00000046613 vacuolar protein sorting-associated protein (vps13d)vacuolar protein sorting-associated protein (vps13d) BY ORTHOLOGY TO:AAEL007551-RA
16.062 -13.65 9.16993e-07 700 5 1 10 [+] picture button
WDR7 ENSDART00000082419 WD repeat protein 7 (TGF-beta resistance-associated protein TRAG) (Rabconnectin-3 beta). [Source:Uniprot/SWISSPROT;Acc:Q9Y4E6]
17.624 -16.19 1e-06 700 8 1 5 [+] picture button
ENSDART00000073410 NOT ANNOTATED
16.3864 -17.28 1e-06 700 6 1 4 [+] picture button
mhc1ze ENSDART00000040516 MHC class I antigen (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8MHA9]
15.9716 -15.62 1e-06 700 6 1 5 [+] picture button
ENSDART00000035573 NOT ANNOTATED
16.3864 -17.28 1e-06 700 11 1 5 [+] picture button
mhc1ze ENSDART00000105021 MHC class I antigen (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8MHB2]
15.9716 -15.62 1e-06 700 8 1 8 [+] picture button
LOC563412 ENSDART00000021403 Eukaryotic translation initiation factor 2C 4 (eIF2C 4) (eIF-2C 4) (Argonaute-4). [Source:Uniprot/SWISSPROT;Acc:Q9HCK5]Eukaryotic translation initiation factor 2C 4 (eIF2C 4) (eIF-2C 4) (Argonaute-4). [Source:Uniprot/SWISSPROT;Acc:Q9HCK5] BY ORTHOLOGY TO:ENSORLT00000012382
16.255 -17.69 1.22838e-06 700 11 3 15 [+] picture button
vac14 ENSDART00000009767 vac14 homolog [Source:RefSeq_peptide;Acc:NP_001004650]
16.8531 -17.66 1.3666e-06 490 6 2 6 [+] picture button
zgc:158400 ENSDART00000079575 hypothetical protein LOC780844 [Source:RefSeq_peptide;Acc:NP_001073133]
16.3733 -17.26 1.48093e-06 286 10 3 19 [+] picture button
zgc:136620 ENSDART00000038575 hypothetical protein LOC678626 [Source:RefSeq_peptide;Acc:NP_001035461]
15.8093 -14.79 1.51916e-06 700 6 3 6 [+] picture button
acadvl ENSDART00000023089 acyl-Coenzyme A dehydrogenase, very long chain [Source:RefSeq_peptide;Acc:NP_997776]
15.691 -12.81 1.95969e-06 239 4 1 12 [+] picture button
zgc:63673 ENSDART00000058147 hypothetical protein LOC393452 [Source:RefSeq_peptide;Acc:NP_956774]
16.0322 -16.32 2.53117e-06 216 4 5 7 [+] picture button
LOC566435 ENSDART00000092735 KIAA1411 (KIAA1411), mRNA [Source:RefSeq_dna;Acc:NM_020819]KIAA1411 (KIAA1411), mRNA [Source:RefSeq_dna;Acc:NM_020819] BY ORTHOLOGY TO:ENSGALT00000025731
15.9463 -13.64 2.75792e-06 700 7 4 9 [+] picture button
riok3 ENSDART00000098827 RIO kinase 3 [Source:RefSeq_peptide;Acc:NP_001003614]
15.6694 -14.62 2.7829e-06 700 6 1 13 [+] picture button
gpr137bb ENSDART00000054183 G protein-coupled receptor 137bb [Source:RefSeq_peptide;Acc:NP_001002691]
15.7793 -13.42 4.87626e-06 393 11 4 16 [+] picture button
snai3 ENSDART00000073549 snail homolog 3 [Source:RefSeq_peptide;Acc:NP_001070853]
16.5017 -16.48 5.23747e-06 403 8 1 9 [+] picture button
LOC570775 ENSDART00000083743 Eukaryotic translation initiation factor 2C 1 (eIF2C 1) (eIF-2C 1) (Argonaute-1) (Putative RNA-binding protein Q99). [Source:Uniprot/SWISSPROT;Acc:Q9UL18]Eukaryotic translation initiation factor 2C 1 (eIF2C 1) (eIF-2C 1) (Argonaute-1) (Putative RNA-binding protein Q99). [Source:Uniprot/SWISSPROT;Acc:Q9UL18] BY ORTHOLOGY TO:ENSMMUT00000008747
15.8888 -14.87 5.76524e-06 700 5 1 6 [+] picture button
zgc:110194 ENSDART00000002459 hypothetical protein LOC553594 [Source:RefSeq_peptide;Acc:NP_001018407]
15.691 -10.51 6.96948e-06 235 5 2 18 [+] picture button
plk4 ENSDART00000043866 Plk4 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q7ZVS3]
15.691 -13.82 7.24355e-06 284 8 3 13 [+] picture button
zgc:162153 ENSDART00000087457 hypothetical protein LOC100037312 [Source:RefSeq_peptide;Acc:NP_001082938]
16.4901 -18.99 7.64886e-06 700 4 1 4 [+] picture button
chst5 ENSDART00000061996 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 [Source:RefSeq_peptide;Acc:NP_956681]
15.8047 -9.82 8.60182e-06 298 11 1 18 [+] picture button
zgc:103539 ENSDART00000017968 hypothetical protein LOC449815 [Source:RefSeq_peptide;Acc:NP_001005988]
17.2389 -16.98 9.0791e-06 497 7 2 8 [+] picture button
zgc:112435 ENSDART00000074534 hypothetical protein LOC619270 [Source:RefSeq_peptide;Acc:NP_001028923]
15.7651 -15.51 9.33749e-06 700 7 1 9 [+] picture button
ntn1b ENSDART00000039482 netrin 1b [Source:RefSeq_peptide;Acc:NP_571073]
16.4248 -23 9.57622e-06 700 4 1 5 [+] picture button
ets1b ENSDART00000045403 v-ets erythroblastosis virus E26 oncogene homolog 1b [Source:RefSeq_peptide;Acc:NP_001032452]
16.8217 -12.89 9.89128e-06 301 10 2 16 [+] picture button
mt-atp6 ENSDART00000093612 ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6). [Source:Uniprot/SWISSPROT;Acc:Q9MIY5]
17.5058 -17.69 1.08263e-05 700 7 5 8 [+] picture button
NP_001073649.1 ENSDART00000077389 zinc finger protein 148 [Source:RefSeq_peptide;Acc:NP_001073649]
17.781 -24.42 1.14874e-05 610 12 11 20 [+] picture button
zgc:112443 ENSDART00000078523 hypothetical protein LOC550392 [Source:RefSeq_peptide;Acc:NP_001017697]
16.2315 -13.86 1.2184e-05 700 2 1 4 [+] picture button
rbpms2 ENSDART00000024062 Cytoplasmic polyadenylation element-binding protein 1 (CPE-binding protein 1) (CPE-BP1) (CPEB-1) (Protein Zorba) (Zebrafish orb-type a) (ZOR-1) (Orb/CPEB-related RNA-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q9YGX5]
16.6426 -18.87 1.53383e-05 1068 6 9 7 [+] picture button
si:ch211-117l16.3 ENSDART00000028941 mitochondrial ribosomal protein S18A like [Source:RefSeq_peptide;Acc:NP_001025285]
16.8281 -11.72 1.68228e-05 246 7 5 11 [+] picture button
zgc:86613 ENSDART00000075672 hypothetical protein LOC415137 [Source:RefSeq_peptide;Acc:NP_001002047]
15.8202 -13.3 1.7422e-05 383 12 1 17 [+] picture button
fbxl14a ENSDART00000050029 F-box and leucine-rich repeat protein 14a [Source:RefSeq_peptide;Acc:NP_958890]
16.568 -17.12 2.04223e-05 700 7 1 7 [+] picture button
snx1 ENSDART00000075184 Sorting nexin-1. [Source:Uniprot/SWISSPROT;Acc:Q13596]Sorting nexin-1. [Source:Uniprot/SWISSPROT;Acc:Q13596] BY ORTHOLOGY TO:ENSGACT00000009740
15.7642 -15.63 2.5876e-05 700 4 5 5 [+] picture button
skap2 ENSDART00000052660 Src kinase-associated phosphoprotein 2 (Src family-associated phosphoprotein 2). [Source:Uniprot/SWISSPROT;Acc:Q6PG29]
16.91 -16.21 2.70683e-05 305 12 2 22 [+] picture button
zgc:158437 ENSDART00000078664 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 (EC 1.14.11.-). [Source:Uniprot/SWISSPROT;Acc:A3KGZ2]
16.0748 -17.95 2.795e-05 700 6 3 6 [+] picture button
abcc2 ENSDART00000016604 ATP-binding cassette, sub-family C (CFTR/MRP), member 2 [Source:RefSeq_peptide;Acc:NP_956883]
15.8047 -10.53 2.80188e-05 192 2 1 2 [+] picture button
zgc:66100 ENSDART00000013814 hypothetical protein LOC393553 [Source:RefSeq_peptide;Acc:NP_956875]
16.1156 -14.58 2.9894e-05 347 6 3 9 [+] picture button
zgc:66295 ENSDART00000005899 hypothetical protein LOC393489 [Source:RefSeq_peptide;Acc:NP_956811]
16.3733 -17.76 3.0881e-05 277 8 2 19 [+] picture button
zgc:110727 ENSDART00000074622 hypothetical protein LOC407653 [Source:RefSeq_peptide;Acc:NP_999947]
15.9185 -10.86 3.27394e-05 167 2 1 2 [+] picture button
SLC9A6 ENSDART00000026195 Sodium/hydrogen exchanger 6 (Na(+)/H(+) exchanger 6) (NHE-6) (Solute carrier family 9 member 6). [Source:Uniprot/SWISSPROT;Acc:Q92581]
16.8904 -19.65 3.9507e-05 591 8 1 10 [+] picture button

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Download table: GFF TXT
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