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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-let-7d

941 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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zgc:112182 ENSDART00000023388 Ubiquitin thioesterase OTU1 (EC 3.1.2.-). [Source:Uniprot/SWISSPROT;Acc:Q567B1]
19.557 -24.3 9.20453e-14 266 6 3 8 [+] picture button
XR_029429.1 ENSDART00000074378 similar to LOC373796 protein (LOC797900), mRNA [Source:RefSeq_dna;Acc:XR_029429]
17.8634 -21.17 1.67919e-13 700 6 1 7 [+] picture button
LOC562671 ENSDART00000102363 supercoiling factor CG9148-PB, isoform B [Source:RefSeq_peptide;Acc:NP_477393]supercoiling factor CG9148-PB, isoform B [Source:RefSeq_peptide;Acc:NP_477393] BY ORTHOLOGY TO:CG9148-RA
15.9716 -19.9 8.91659e-09 700 8 3 8 [+] picture button
pias4 ENSDART00000009601 protein inhibitor of activated STAT, 4 [Source:RefSeq_peptide;Acc:NP_998568]
16.4258 -18.09 5.95665e-08 700 6 1 6 [+] picture button
zgc:112077 ENSDART00000032118 hypothetical protein LOC550464 [Source:RefSeq_peptide;Acc:NP_001017767]
15.9641 -17.4 8.8528e-08 797 8 3 17 [+] picture button
tarbp2 ENSDART00000103455 TAR (HIV) RNA binding protein 2 [Source:RefSeq_peptide;Acc:NP_956291]
16.32 -12.96 9.98851e-08 747 6 1 8 [+] picture button
A2BHG4_DANRE ENSDART00000076845 Novel protein similar to vertebrate Fraser syndrome 1 homolog (Human) (FRAS1) (Fragment). [Source:Uniprot/SPTREMBL;Acc:A2BHG4]
17.8384 -26.41 1.69327e-07 700 8 7 12 [+] picture button
A2BIH4_DANRE ENSDART00000099848 Novel protein similar to vertebrate zinc finger protein 644 (ZNF644). [Source:Uniprot/SPTREMBL;Acc:A2BIH4]
15.7716 -24.76 2.7015e-07 700 5 2 8 [+] picture button
LOC100006044 ENSDART00000057622 Fas apoptotic inhibitory molecule 2 (Lifeguard protein) (Transmembrane BAX inhibitor motif-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9BWQ8]Fas apoptotic inhibitory molecule 2 (Lifeguard protein) (Transmembrane BAX inhibitor motif-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9BWQ8] BY ORTHOLOGY TO:ENSOANT00000030498
15.9716 -17.09 4.60622e-07 700 8 2 11 [+] picture button
arl8 ENSDART00000099121 ADP-ribosylation factor-like 8 [Source:RefSeq_peptide;Acc:NP_956118]
16.3504 -18.32 6.15367e-07 2177 4 1 4 [+] picture button
atp2a2a ENSDART00000086447 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 [Source:RefSeq_peptide;Acc:NP_957259]
17.5363 -19.51 7.01176e-07 700 3 9 5 [+] picture button
LOC796380 ENSDART00000083129 translation initiation factor 3, subunit S9, putativetranslation initiation factor 3, subunit S9, putative BY ORTHOLOGY TO:AAEL007718-RA
16.6312 -24.06 7.73218e-07 700 7 1 10 [+] picture button
acvr1b ENSDART00000023094 activin A receptor, type IB [Source:RefSeq_peptide;Acc:NP_571065]
15.9955 -16.3 8.22493e-07 700 7 7 7 [+] picture button
LOC100008537 ENSDART00000046613 vacuolar protein sorting-associated protein (vps13d)vacuolar protein sorting-associated protein (vps13d) BY ORTHOLOGY TO:AAEL007551-RA
15.7492 -15.63 9.16993e-07 700 5 1 10 [+] picture button
WDR7 ENSDART00000082419 WD repeat protein 7 (TGF-beta resistance-associated protein TRAG) (Rabconnectin-3 beta). [Source:Uniprot/SWISSPROT;Acc:Q9Y4E6]
18.0788 -22.18 1e-06 700 8 1 5 [+] picture button
ENSDART00000073410 NOT ANNOTATED
15.8679 -22.73 1e-06 700 6 1 4 [+] picture button
mhc1ze ENSDART00000040516 MHC class I antigen (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8MHA9]
16.179 -23.56 1e-06 700 6 1 5 [+] picture button
ENSDART00000035573 NOT ANNOTATED
16.0753 -18.69 1e-06 700 11 1 5 [+] picture button
mhc1ze ENSDART00000105021 MHC class I antigen (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8MHB2]
16.4901 -17.45 1e-06 700 8 1 8 [+] picture button
LOC564859 ENSDART00000084855 Serine/threonine-protein kinase 40 (EC 2.7.11.1) (SINK-homologous serine/threonine-protein kinase). [Source:Uniprot/SWISSPROT;Acc:Q8N2I9]Serine/threonine-protein kinase 40 (EC 2.7.11.1) (SINK-homologous serine/threonine-protein kinase). [Source:Uniprot/SWISSPROT;Acc:Q8N2I9] BY ORTHOLOGY TO:ENSMODT00000022614
15.9173 -15.72 1.12523e-06 700 9 1 12 [+] picture button
vac14 ENSDART00000009767 vac14 homolog [Source:RefSeq_peptide;Acc:NP_001004650]
15.8808 -14.01 1.3666e-06 490 6 2 6 [+] picture button
zgc:158400 ENSDART00000079575 hypothetical protein LOC780844 [Source:RefSeq_peptide;Acc:NP_001073133]
17.0555 -18.44 1.48093e-06 286 10 3 19 [+] picture button
NP_001073985.1 ENSDART00000075765 similar to glutaredoxin cysteine-rich 1 protein [Source:RefSeq_peptide;Acc:NP_001073985]
16.8417 -17.49 1.80212e-06 700 14 2 16 [+] picture button
prkcq ENSDART00000046253 si:ch211-239o15.1 [Source:RefSeq_peptide;Acc:NP_001082839]
16.4818 -18.72 1.80558e-06 700 6 1 8 [+] picture button
smox ENSDART00000053685 Smox protein. [Source:Uniprot/SPTREMBL;Acc:Q6NYY8]
15.9967 -20.8 1.88441e-06 369 10 5 18 [+] picture button
acadvl ENSDART00000023089 acyl-Coenzyme A dehydrogenase, very long chain [Source:RefSeq_peptide;Acc:NP_997776]
16.6007 -20.25 1.95969e-06 239 4 1 12 [+] picture button
p2rx1 ENSDART00000002866 purinergic receptor P2X, ligand-gated ion channel, 1 [Source:RefSeq_peptide;Acc:NP_945333]
16.1973 -26.67 2.44772e-06 700 8 1 9 [+] picture button
zgc:63673 ENSDART00000058147 hypothetical protein LOC393452 [Source:RefSeq_peptide;Acc:NP_956774]
18.4199 -15.25 2.53117e-06 216 4 5 7 [+] picture button
LOC566435 ENSDART00000092735 KIAA1411 (KIAA1411), mRNA [Source:RefSeq_dna;Acc:NM_020819]KIAA1411 (KIAA1411), mRNA [Source:RefSeq_dna;Acc:NM_020819] BY ORTHOLOGY TO:ENSGALT00000025731
16.4709 -18.8 2.75792e-06 700 7 4 9 [+] picture button
gpr137bb ENSDART00000054183 G protein-coupled receptor 137bb [Source:RefSeq_peptide;Acc:NP_001002691]
17.4461 -18.91 4.87626e-06 393 11 4 16 [+] picture button
snai3 ENSDART00000073549 snail homolog 3 [Source:RefSeq_peptide;Acc:NP_001070853]
15.8416 -12.08 5.23747e-06 403 8 1 9 [+] picture button
zgc:112259 ENSDART00000102430 Transmembrane protein 41A precursor. [Source:Uniprot/SWISSPROT;Acc:Q502G2]
16.192 -16.56 6.65877e-06 653 10 2 11 [+] picture button
si:dkey-177p2.14 ENSDART00000077782 hypothetical protein LOC566444 [Source:RefSeq_peptide;Acc:NP_001068583]
16.269 -19.73 6.85389e-06 540 8 2 13 [+] picture button
dpp3 ENSDART00000011305 dipeptidylpeptidase 3 [Source:RefSeq_peptide;Acc:NP_001002683]
16.7746 -19.97 7.17142e-06 560 4 1 4 [+] picture button
zgc:162153 ENSDART00000087457 hypothetical protein LOC100037312 [Source:RefSeq_peptide;Acc:NP_001082938]
15.8679 -16.83 7.64886e-06 700 4 1 4 [+] picture button
LOC572325 ENSDART00000062418 Dymeclin (Dyggve-Melchior-Clausen syndrome protein). [Source:Uniprot/SWISSPROT;Acc:Q7RTS9]Dymeclin (Dyggve-Melchior-Clausen syndrome protein). [Source:Uniprot/SWISSPROT;Acc:Q7RTS9] BY ORTHOLOGY TO:ENST00000269445
15.8054 -16.42 7.89303e-06 700 8 2 11 [+] picture button
NP_542768.1 (1 of 2) ENSDART00000089386 CDNA FLJ20703 fis, clone KAIA1965. [Source:Uniprot/SPTREMBL;Acc:Q9NWP4]
16.4901 -17.94 8.13674e-06 700 7 1 7 [+] picture button
zgc:103539 ENSDART00000017968 hypothetical protein LOC449815 [Source:RefSeq_peptide;Acc:NP_001005988]
17.5621 -19.03 9.0791e-06 497 7 2 8 [+] picture button
ets1b ENSDART00000045403 v-ets erythroblastosis virus E26 oncogene homolog 1b [Source:RefSeq_peptide;Acc:NP_001032452]
18.2993 -23 9.89128e-06 301 10 2 16 [+] picture button
mt-atp6 ENSDART00000093612 ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6). [Source:Uniprot/SWISSPROT;Acc:Q9MIY5]
16.3596 -15.97 1.08263e-05 700 7 5 8 [+] picture button
NP_001073649.1 ENSDART00000077389 zinc finger protein 148 [Source:RefSeq_peptide;Acc:NP_001073649]
16.6237 -17.47 1.14874e-05 610 12 11 20 [+] picture button
zgc:112443 ENSDART00000078523 hypothetical protein LOC550392 [Source:RefSeq_peptide;Acc:NP_001017697]
15.8072 -13.3 1.2184e-05 700 2 1 4 [+] picture button
vps29 ENSDART00000101246 vacuolar protein sorting 29 [Source:RefSeq_peptide;Acc:NP_956331]
16.0918 -16.24 1.34699e-05 309 6 1 12 [+] picture button
A0PJR6_DANRE ENSDART00000100411 Hypothetical protein. [Source:Uniprot/SPTREMBL;Acc:A0PJR6]
16.4901 -18.82 1.44769e-05 700 5 1 7 [+] picture button
LOC793783 ENSDART00000103236 ankyrin repeat domain 37 [Source:MarkerSymbol;Acc:MGI:3603344]ankyrin repeat domain 37 [Source:MarkerSymbol;Acc:MGI:3603344] BY ORTHOLOGY TO:ENSMUST00000053558
17.4496 -28.95 1.5614e-05 700 3 1 3 [+] picture button
zgc:55573 ENSDART00000015932 hypothetical protein LOC406764 [Source:RefSeq_peptide;Acc:NP_998620]
16.1586 -17.81 1.63236e-05 528 6 1 12 [+] picture button
si:ch211-117l16.3 ENSDART00000028941 mitochondrial ribosomal protein S18A like [Source:RefSeq_peptide;Acc:NP_001025285]
17.9651 -13.97 1.68228e-05 246 7 5 11 [+] picture button
zgc:103671 ENSDART00000060258 Cornifelin homolog. [Source:Uniprot/SWISSPROT;Acc:Q66I68]
15.8478 -20 1.72094e-05 330 7 1 9 [+] picture button
fbxl14a ENSDART00000050029 F-box and leucine-rich repeat protein 14a [Source:RefSeq_peptide;Acc:NP_958890]
16.3596 -20.44 2.04223e-05 700 7 1 7 [+] picture button
zgc:103755 ENSDART00000097611 hypothetical protein LOC449988 [Source:RefSeq_peptide;Acc:NP_001006009]
15.9185 -17.09 2.0941e-05 277 7 2 17 [+] picture button

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Download table: GFF TXT
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