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Target Listing




Highlighted rows in the table indicate genes with published known targets


All miRNA hits for Danio rerio

27534 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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zgc:110577 ENSDART00000066317 hypothetical protein LOC550127 [Source:RefSeq_peptide;Acc:NP_001017555]
71 -93 1.73887e-17 333 4 4 5 [+] picture button
zgc:112182 ENSDART00000023388 Ubiquitin thioesterase OTU1 (EC 3.1.2.-). [Source:Uniprot/SWISSPROT;Acc:Q567B1]
103 -105 9.20453e-14 266 6 3 8 [+] picture button
XR_029429.1 ENSDART00000074378 similar to LOC373796 protein (LOC797900), mRNA [Source:RefSeq_dna;Acc:XR_029429]
98 -110 1.67919e-13 700 6 1 7 [+] picture button
si:dkey-48h7.2 ENSDART00000026207 Novel protein similar to vertebrate phosphodiesterase 3A, cGMP- inhibited (PDE3A) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5RHY4]
66 -76 4.15124e-12 700 4 11 4 [+] picture button
zgc:66103 ENSDART00000019269 hypothetical protein LOC322814 [Source:RefSeq_peptide;Acc:NP_955915]
178 -210 1.50361e-11 700 11 8 15 [+] picture button
zgc:113267 ENSDART00000045659 hypothetical protein LOC541488 [Source:RefSeq_peptide;Acc:NP_001014323]
67 -85 2.2495e-11 1000 4 2 5 [+] picture button
PDE3B ENSDART00000089640 cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B) (CGIPDE1) (CGIP1). [Source:Uniprot/SWISSPROT;Acc:Q13370]
115 -130 2.61536e-11 700 7 11 8 [+] picture button
zgc:92458 ENSDART00000045724 hypothetical protein LOC431776 [Source:RefSeq_peptide;Acc:NP_001002229]
130 -135 3.65027e-11 700 8 2 8 [+] picture button
LOC797613 ENSDART00000022288 Ribonucleoprotein PTB-binding 2 (Protein raver-2). [Source:Uniprot/SWISSPROT;Acc:Q9HCJ3]Ribonucleoprotein PTB-binding 2 (Protein raver-2). [Source:Uniprot/SWISSPROT;Acc:Q9HCJ3] BY ORTHOLOGY TO:ENSMODT00000001519
161 -181 4.1642e-11 700 10 3 11 [+] picture button
frzb ENSDART00000002633 frizzled-related protein [Source:RefSeq_peptide;Acc:NP_571018]
101 -85 4.49432e-11 700 6 12 7 [+] picture button
zfpm2a ENSDART00000058685 zinc finger protein, multitype 2a [Source:RefSeq_peptide;Acc:NP_001034724]
182 -196 6.16143e-11 700 11 14 16 [+] picture button
arpc1b ENSDART00000033713 actin related protein 2/3 complex, subunit 1B [Source:RefSeq_peptide;Acc:NP_998321]
104 -77 6.30766e-11 306 6 2 10 [+] picture button
zgc:154043 ENSDART00000053576 hypothetical protein LOC768136 [Source:RefSeq_peptide;Acc:NP_001070750]
205 -198 1.28591e-10 415 12 3 21 [+] picture button
DOCK4 ENSDART00000087817 Dedicator of cytokinesis protein 4. [Source:Uniprot/SWISSPROT;Acc:Q8N1I0]
83 -87 1.83755e-10 700 5 5 9 [+] picture button
LOC564629 ENSDART00000081316 PAB-dependent poly(A)-specific ribonuclease subunit 3 (hPan3). [Source:Uniprot/SWISSPROT;Acc:Q58A45]PAB-dependent poly(A)-specific ribonuclease subunit 3 (hPan3). [Source:Uniprot/SWISSPROT;Acc:Q58A45] BY ORTHOLOGY TO:ENST00000380958
114 -136 1.92505e-10 700 7 14 9 [+] picture button
prdm1 ENSDART00000017445 Blimp-1 homolog [Source:RefSeq_peptide;Acc:NP_955809]
47 -56 2.11808e-10 1234 3 5 4 [+] picture button
nipa2 ENSDART00000078316 non imprinted in Prader-Willi/Angelman syndrome 2 [Source:RefSeq_peptide;Acc:NP_998290]
170 -149 2.27916e-10 363 10 10 16 [+] picture button
Q86XQ1_HUMAN ENSDART00000081064 XTP9. [Source:Uniprot/SPTREMBL;Acc:Q86XQ1]
82 -81 5.49335e-10 700 5 3 5 [+] picture button
si:dkey-211c3.1 ENSDART00000089836 Novel protein similar to vertebrate Jumonji, AT rich interactive domain 2 (JARID2) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1LVC2]
140 -155 6.56621e-10 700 8 5 17 [+] picture button
bckdha ENSDART00000059347 branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:RefSeq_peptide;Acc:NP_001019590]
104 -118 6.94665e-10 459 6 2 13 [+] picture button
A2CE98_DANRE ENSDART00000053818 Novel protein similar to vertebrate nuclear receptor subfamily 3, group C, member 2 (NR3C2) (Fragment). [Source:Uniprot/SPTREMBL;Acc:A2CE98]
151 -156 8.16856e-10 700 9 11 8 [+] picture button
hoxb8a ENSDART00000046638 Homeobox protein Hox-B8a (Hox-B8). [Source:Uniprot/SWISSPROT;Acc:Q8AWZ0]
53 -68 1.01875e-09 700 3 6 6 [+] picture button
LOC560800 ENSDART00000025097 dedicator of cytokinesis 11 [Source:RefSeq_peptide;Acc:NP_653259]dedicator of cytokinesis 11 [Source:RefSeq_peptide;Acc:NP_653259] BY ORTHOLOGY TO:SINFRUT00000154574
66 -83 1.0739e-09 700 4 1 5 [+] picture button
rsu1 ENSDART00000066593 Rsu1 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5U3F0]
65 -65 1.28224e-09 700 4 1 5 [+] picture button
pkd2 ENSDART00000020412 polycystic kidney disease 2 [Source:RefSeq_peptide;Acc:NP_001002310]
88 -75 1.34441e-09 205 5 2 13 [+] picture button
LOC100001198 ENSDART00000085531 5'-AMP-activated protein kinase catalytic subunit alpha-1 (EC 2.7.11.1) (AMPK alpha-1 chain). [Source:Uniprot/SWISSPROT;Acc:Q13131]5'-AMP-activated protein kinase catalytic subunit alpha-1 (EC 2.7.11.1) (AMPK alpha-1 chain). [Source:Uniprot/SWISSPROT;Acc:Q13131] BY ORTHOLOGY TO:ENSMMUT00000033498
103 -118 1.45587e-09 700 6 8 13 [+] picture button
si:dkey-6a5.1 ENSDART00000026593 glutamate receptor interacting protein 1 [Source:RefSeq_peptide;Acc:NP_001038316]
78 -88 1.49618e-09 700 5 11 6 [+] picture button
synj1 ENSDART00000039444 synaptojanin 1 [Source:RefSeq_peptide;Acc:NP_001007031]
144 -131 1.5704e-09 700 9 2 11 [+] picture button
zgc:154069 ENSDART00000100727 hypothetical protein LOC777767 [Source:RefSeq_peptide;Acc:NP_001071273]
80 -90 1.57947e-09 1056 5 1 6 [+] picture button
fn3krp ENSDART00000033538 fructosamine-3-kinase-related protein [Source:RefSeq_peptide;Acc:NP_001006089]
188 -171 1.59006e-09 368 11 2 13 [+] picture button
fstl5 ENSDART00000058796 follistatin-like 5 [Source:RefSeq_peptide;Acc:NP_001027012]
48 -53 1.87336e-09 700 3 3 4 [+] picture button
asb7 ENSDART00000006343 ankyrin repeat and SOCS box-containing 7 [Source:RefSeq_peptide;Acc:NP_999895]
103 -98 2.26631e-09 300 6 11 5 [+] picture button
LOC570463 ENSDART00000074614 Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.1.2.15) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47) (Deubiquitinating enzyme 47). [Source:Uniprot/SWISSPROT;Acc:Q96K76]Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.1.2.15) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47) (Deubiquitinating enzyme 47). [Source:Uniprot/SWISSPROT;Acc:Q96K76] BY ORTHOLOGY TO:ENSCAFT00000012458
81 -87 2.73398e-09 700 5 1 5 [+] picture button
LOC569190 ENSDART00000060866 Activin receptor type-2B precursor (EC 2.7.11.30) (Activin receptor type IIB) (ACTR-IIB). [Source:Uniprot/SWISSPROT;Acc:Q13705]Activin receptor type-2B precursor (EC 2.7.11.30) (Activin receptor type IIB) (ACTR-IIB). [Source:Uniprot/SWISSPROT;Acc:Q13705] BY ORTHOLOGY TO:ENSMODT00000011293
162 -186 2.91201e-09 700 10 2 12 [+] picture button
pccb ENSDART00000099340 propionyl Coenzyme A carboxylase, beta polypeptide [Source:RefSeq_peptide;Acc:NP_998090]
85 -100 2.95797e-09 700 5 1 6 [+] picture button
pi15 ENSDART00000012597 Peptidase inhibitor 15 precursor. [Source:Uniprot/SWISSPROT;Acc:Q7T141]
97 -116 3.02226e-09 700 6 1 6 [+] picture button
LOC572061 ENSDART00000006602 cAMP-specific 3',5'-cyclic phosphodiesterase 4A (EC 3.1.4.17) (DPDE2) (PDE46). [Source:Uniprot/SWISSPROT;Acc:P27815]cAMP-specific 3',5'-cyclic phosphodiesterase 4A (EC 3.1.4.17) (DPDE2) (PDE46). [Source:Uniprot/SWISSPROT;Acc:P27815] BY ORTHOLOGY TO:ENST00000270478
64 -84 3.19542e-09 700 4 2 4 [+] picture button
smox ENSDART00000053685 Smox protein. [Source:Uniprot/SPTREMBL;Acc:Q6NYY8]
168 -137 3.22473e-09 369 10 5 18 [+] picture button
LOC566476 ENSDART00000086929 Abhydrolase domain-containing protein 7 (Epoxide hydrolase-related protein). [Source:Uniprot/SWISSPROT;Acc:Q8IUS5]Abhydrolase domain-containing protein 7 (Epoxide hydrolase-related protein). [Source:Uniprot/SWISSPROT;Acc:Q8IUS5] BY ORTHOLOGY TO:SINFRUT00000141456
81 -95 3.2721e-09 700 5 4 6 [+] picture button
A4FVI1_DANRE ENSDART00000078681 Hypothetical protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:A4FVI1]
119 -141 3.56372e-09 700 7 3 8 [+] picture button
LOC559017 ENSDART00000057211 Rho guanine nucleotide exchange factor 4 (APC-stimulated guanine nucleotide exchange factor) (Asef). [Source:Uniprot/SWISSPROT;Acc:Q9NR80]Rho guanine nucleotide exchange factor 4 (APC-stimulated guanine nucleotide exchange factor) (Asef). [Source:Uniprot/SWISSPROT;Acc:Q9NR80] BY ORTHOLOGY TO:ENSPTRT00000023127
99 -106 3.63239e-09 700 6 3 11 [+] picture button
si:ch211-134n17.1 ENSDART00000078459 hypothetical protein LOC566642 [Source:RefSeq_peptide;Acc:NP_001038577]
130 -146 4.05246e-09 700 8 9 13 [+] picture button
cpox ENSDART00000089172 coproporphyrinogen oxidase [Source:RefSeq_peptide;Acc:NP_001035183]
102 -110 4.59583e-09 559 6 2 12 [+] picture button
zgc:153017 ENSDART00000084381 hypothetical protein LOC568207 [Source:RefSeq_peptide;Acc:NP_001070641]
169 -181 4.68059e-09 619 10 4 16 [+] picture button
A2RV11_DANRE ENSDART00000073480 Hypothetical protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:A2RV11]
85 -85 4.86414e-09 700 5 1 5 [+] picture button
LOC100002296 ENSDART00000102419 Insulin-like growth factor 2 mRNA-binding protein 2 (IGF2 mRNA-binding protein 2) (IGF-II mRNA-binding protein 2) (IMP-2) (Hepatocellular carcinoma autoantigen p62) (VICKZ family member 2). [Source:Uniprot/SWISSPROT;Acc:Q9Y6M1]Insulin-like growth factor 2 mRNA-binding protein 2 (IGF2 mRNA-binding protein 2) (IGF-II mRNA-binding protein 2) (IMP-2) (Hepatocellular carcinoma autoantigen p62) (VICKZ family member 2). [Source:Uniprot/SWISSPROT;Acc:Q9Y6M1] BY ORTHOLOGY TO:ENSGACT00000008004
131 -145 4.93916e-09 700 8 10 14 [+] picture button
wee1 ENSDART00000060963 wee1 [Source:RefSeq_peptide;Acc:NP_001005770]
65 -80 5.43826e-09 1018 4 3 6 [+] picture button
si:dkey-12h9.7 ENSDART00000078518 hypothetical protein LOC569806 [Source:RefSeq_peptide;Acc:NP_001038654]
114 -113 5.5682e-09 700 7 2 10 [+] picture button
zgc:153304 ENSDART00000098562 Solute carrier family 25 member 42. [Source:Uniprot/SWISSPROT;Acc:Q0P483]
156 -156 5.63237e-09 700 9 2 15 [+] picture button
zgc:153972 ENSDART00000086437 hypothetical protein LOC563581 [Source:RefSeq_peptide;Acc:NP_001073477]
179 -205 6.25363e-09 868 11 10 10 [+] picture button

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