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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-99b

853 hits found.


Page 1 of 18
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Prss15 ENSRNOT00000059542 protease, serine, 15 (Prss15), mRNA [Source:RefSeq_dna;Acc:NM_133404]
15.6547 -21.58 5.01791e-07 700 18 1 36 [+] picture button
Map3k3_predicted ENSRNOT00000055126 NOT ANNOTATED
16.0539 -25.99 1e-06 700 13 1 14 [+] picture button
Qtrt1 ENSRNOT00000010030 queuine tRNA-ribosyltransferase 1 [Source:RefSeq_peptide;Acc:NP_071586]
15.2516 -24.19 1e-06 362 18 2 49 [+] picture button
Hs3st2 ENSRNOT00000023773 Heparan sulfate glucosamine 3-O-sulfotransferase 2 (EC 2.8.2.29) (Heparan sulfate D-glucosaminyl 3-O-sulfotransferase 2) (Heparan sulfate 3-O-sulfotransferase 2). [Source:Uniprot/SWISSPROT;Acc:Q80W66]
15.7836 -14.18 1.39874e-06 737 14 6 22 [+] picture button
1110032F04Rik ENSRNOT00000012982 RIKEN cDNA 1110032F04 gene [Source:MarkerSymbol;Acc:MGI:1915975]
16.1459 -28.9 2.59047e-06 123 6 5 32 [+] picture button
RGD1309529_predicted ENSRNOT00000000749 Zinc finger CDGSH domain-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q9NZ45]Zinc finger CDGSH domain-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q9NZ45] BY ORTHOLOGY TO:ENSPTRT00000004707
14.8735 -14.24 5.2674e-06 325 18 7 51 [+] picture button
Frap1 ENSRNOT00000014167 FKBP12-rapamycin complex-associated protein (FK506-binding protein 12- rapamycin complex-associated protein 1) (Rapamycin target protein) (RAPT1) (Mammalian target of rapamycin) (mTOR). [Source:Uniprot/SWISSPROT;Acc:P42346]
14.2484 -12.81 6.33912e-06 841 15 8 23 [+] picture button
Lrrc3 ENSRNOT00000001632 Leucine-rich repeat-containing protein 3 precursor. [Source:Uniprot/SWISSPROT;Acc:P59035]
15.7642 -17.13 8.64742e-06 700 22 2 36 [+] picture button
RGD1310111 ENSRNOT00000026291 Putative L-aspartate dehydrogenase (EC 1.4.1.21). [Source:Uniprot/SWISSPROT;Acc:Q5I0J9]
14.0011 -14.76 1.08139e-05 700 16 2 18 [+] picture button
Gfer ENSRNOT00000017917 Augmenter of liver regeneration. [Source:Uniprot/SWISSPROT;Acc:Q63042]
15.4329 -25.2 1.09812e-05 547 22 2 35 [+] picture button
Atp6v0b_predicted ENSRNOT00000026704 vacuolar ATP synthase proteolipid subunitvacuolar ATP synthase proteolipid subunit BY ORTHOLOGY TO:AAEL012113-RA
15.3499 -15.15 1.97991e-05 286 19 7 61 [+] picture button
RGD1308556 ENSRNOT00000043162 Signal peptide peptidase-like 2B (EC 3.4.23.-) (Protein SPP-like 2B) (Protein SPPL2b). [Source:Uniprot/SWISSPROT;Acc:Q5PQL3]
14.2996 -22.6 2.23934e-05 1074 20 2 24 [+] picture button
Vmd2l1_predicted ENSRNOT00000004973 Bestrophin-2 (Vitelliform macular dystrophy 2-like protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8NFU1]Bestrophin-2 (Vitelliform macular dystrophy 2-like protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8NFU1] BY ORTHOLOGY TO:SINFRUT00000151123
14.1296 -17.46 2.44473e-05 364 15 4 37 [+] picture button
LOC681389 ENSRNOT00000056600 conserved hypothetical proteinconserved hypothetical protein BY ORTHOLOGY TO:AAEL001314-RA
14.3423 -24.18 2.58237e-05 700 18 2 40 [+] picture button
Neil2_predicted ENSRNOT00000014198 Endonuclease VIII-like 2 (EC 3.2.2.-) (EC 4.2.99.18) (Nei-like 2) (DNA glycosylase/AP lyase Neil2) (DNA-(apurinic or apyrimidinic site) lyase Neil2) (NEH2). [Source:Uniprot/SWISSPROT;Acc:Q969S2]Endonuclease VIII-like 2 (EC 3.2.2.-) (EC 4.2.99.18) (Nei-like 2) (DNA glycosylase/AP lyase Neil2) (DNA-(apurinic or apyrimidinic site) lyase Neil2) (NEH2). [Source:Uniprot/SWISSPROT;Acc:Q969S2] BY ORTHOLOGY TO:ENSXETT00000031381
14.5196 -16.88 3.20828e-05 700 19 3 28 [+] picture button
Nme3 ENSRNOT00000021650 non-metastatic cell expressed protein 3 [Source:RefSeq_peptide;Acc:NP_445959]
14.8951 -16.53 3.26251e-05 134 7 4 37 [+] picture button
Clptm1_predicted ENSRNOT00000024779 Cleft lip and palate transmembrane protein 1 homolog. [Source:Uniprot/SWISSPROT;Acc:Q2NL17]Cleft lip and palate transmembrane protein 1 homolog. [Source:Uniprot/SWISSPROT;Acc:Q2NL17] BY ORTHOLOGY TO:ENSBTAT00000027395
14.811 -17 3.36638e-05 442 18 6 34 [+] picture button
Phlda2_predicted ENSRNOT00000027972 Pleckstrin homology-like domain family A member 2 (Fragment). [Source:Uniprot/SPTREMBL;Acc:A0T2W6]
14.4462 -17.37 3.61183e-05 700 17 3 28 [+] picture button
Pnck ENSRNOT00000024227 Calcium/calmodulin-dependent protein kinase type 1B (EC 2.7.11.17) (CaM kinase IB) (CaM kinase I beta) (CaMKI-beta) (CaM-KI beta) (Pregnancy up-regulated non-ubiquitously expressed CaM kinase homolog). [Source:Uniprot/SWISSPROT;Acc:O70150]
13.9804 -18.53 4.62252e-05 373 15 7 51 [+] picture button
Shc2_predicted ENSRNOT00000010714 SHC-transforming protein 2 (SH2 domain protein C2) (Src homology 2 domain-containing-transforming protein C2) (Protein Sck). [Source:Uniprot/SWISSPROT;Acc:P98077]SHC-transforming protein 2 (SH2 domain protein C2) (Src homology 2 domain-containing-transforming protein C2) (Protein Sck). [Source:Uniprot/SWISSPROT;Acc:P98077] BY ORTHOLOGY TO:SINFRUT00000137453
14.5447 -24.54 4.81993e-05 600 19 5 31 [+] picture button
Insig2 ENSRNOT00000003391 Insulin-induced gene 2 protein (INSIG-2). [Source:Uniprot/SWISSPROT;Acc:Q80UA9]
13.9843 -12.91 5.23715e-05 1609 7 3 7 [+] picture button
RGD1310008 ENSRNOT00000014090 Dysbindin domain-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q5M831]
14.3017 -24.14 5.9804e-05 1000 20 3 25 [+] picture button
RGD1563235_predicted ENSRNOT00000023911 LOC402912 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6P3G4]LOC402912 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6P3G4] BY ORTHOLOGY TO:ENSDART00000058628
15.6935 -17.55 6.28052e-05 468 17 5 30 [+] picture button
Dao1 ENSRNOT00000000881 D-amino-acid oxidase (EC 1.4.3.3) (DAMOX) (DAO) (DAAO). [Source:Uniprot/SWISSPROT;Acc:O35078]
14.3032 -28.85 6.94642e-05 700 16 2 24 [+] picture button
Dus2l_predicted ENSRNOT00000026827 dihydrouridine synthase 2-like (SMM1, S. cerevisiae) [Source:MarkerSymbol;Acc:MGI:1913619]dihydrouridine synthase 2-like (SMM1, S. cerevisiae) [Source:MarkerSymbol;Acc:MGI:1913619] BY ORTHOLOGY TO:ENSMUST00000034375
15.7063 -21.78 7.07415e-05 317 17 7 65 [+] picture button
Fntb ENSRNOT00000010588 Protein farnesyltransferase subunit beta (EC 2.5.1.58) (CAAX farnesyltransferase subunit beta) (RAS proteins prenyltransferase beta) (FTase-beta). [Source:Uniprot/SWISSPROT;Acc:Q02293]
15.5806 -32.4 7.17258e-05 1229 14 3 15 [+] picture button
Wdr32_predicted ENSRNOT00000016384 WD repeat domain 32 [Source:RefSeq_peptide;Acc:NP_077321]WD repeat domain 32 [Source:RefSeq_peptide;Acc:NP_077321] BY ORTHOLOGY TO:ENSORLT00000022734
15.3736 -24.41 7.34402e-05 838 18 6 26 [+] picture button
RGD1311126_predicted ENSRNOT00000013459 Uncharacterized protein C1orf34 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6PIU8]Uncharacterized protein C1orf34 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6PIU8] BY ORTHOLOGY TO:ENSGALT00000017155
15.1384 -13.04 7.70871e-05 530 18 6 39 [+] picture button
LOC681802 ENSRNOT00000060565 selenoprotein X 1 [Source:RefSeq_peptide;Acc:NP_001037750]
15.1139 -22.65 8.11984e-05 700 19 1 30 [+] picture button
Wnt3a_predicted ENSRNOT00000058336 wingless-related MMTV integration site 3A [Source:MarkerSymbol;Acc:MGI:98956]wingless-related MMTV integration site 3A [Source:MarkerSymbol;Acc:MGI:98956] BY ORTHOLOGY TO:ENSMUST00000010044
15.3493 -19.24 8.22523e-05 700 19 2 24 [+] picture button
Cdc37l1 ENSRNOT00000016000 cell division cycle 37 homolog (S. cerevisiae)-like 1 [Source:RefSeq_peptide;Acc:NP_001011941]
15.8729 -17.31 8.76203e-05 506 16 9 43 [+] picture button
Smarca5_predicted ENSRNOT00000024568 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 (EC 3.6.1.-) (SWI/SNF-related matrix- associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H). [Source:Uniprot/SWISSPROT;Acc:O60264]SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 (EC 3.6.1.-) (SWI/SNF-related matrix- associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H). [Source:Uniprot/SWISSPROT;Acc:O60264] BY ORTHOLOGY TO:ENSMMUT00000001198
14.677 -14.89 9.46576e-05 1128 5 8 6 [+] picture button
Mvd ENSRNOT00000018145 Diphosphomevalonate decarboxylase (EC 4.1.1.33) (Mevalonate pyrophosphate decarboxylase) (Mevalonate (diphospho)decarboxylase). [Source:Uniprot/SWISSPROT;Acc:Q62967]
14.9724 -26.02 0.000103506 441 18 4 41 [+] picture button
RGD1310048_predicted ENSRNOT00000017820 MGC20983 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q96CG5]MGC20983 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q96CG5] BY ORTHOLOGY TO:ENSGACT00000025349
16.0753 -25.57 0.000119859 700 17 4 25 [+] picture button
Card9 ENSRNOT00000025456 Caspase recruitment domain-containing protein 9 (rCARD9). [Source:Uniprot/SWISSPROT;Acc:Q9EPY0]
15.9185 -20.61 0.000125057 129 7 4 34 [+] picture button
Wdtc1_predicted ENSRNOT00000011311 WD and tetratricopeptide repeat proteinWD and tetratricopeptide repeat protein BY ORTHOLOGY TO:AAEL000008-RA
14.8411 -20.65 0.000137057 700 13 6 17 [+] picture button
Rspo4 ENSRNOT00000055445 R-spondin family, member 4 [Source:MarkerSymbol;Acc:MGI:1924467]
14.3122 -21.45 0.00014201 700 13 1 16 [+] picture button
1810007M14Rik ENSRNOT00000002800 RIKEN cDNA 1810007M14 gene [Source:MarkerSymbol;Acc:MGI:1914617]
14.8892 -20.22 0.000148075 700 21 6 31 [+] picture button
Cdc37 ENSRNOT00000042314 Hsp90 co-chaperone Cdc37 (Hsp90 chaperone protein kinase-targeting subunit) (p50Cdc37). [Source:Uniprot/SWISSPROT;Acc:Q63692]
18.0236 -28.6 0.000152762 377 15 3 41 [+] picture button
RGD1563595_predicted ENSRNOT00000016846 Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase (EC 3.2.1.113) (ER alpha-1,2-mannosidase) (Mannosidase alpha class 1B member 1) (Man9GlcNAc2-specific-processing alpha-mannosidase). [Source:Uniprot/SWISSPROT;Acc:Q9UKM7]Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase (EC 3.2.1.113) (ER alpha-1,2-mannosidase) (Mannosidase alpha class 1B member 1) (Man9GlcNAc2-specific-processing alpha-mannosidase). [Source:Uniprot/SWISSPROT;Acc:Q9UKM7] BY ORTHOLOGY TO:ENSGACT00000023930
15.3493 -15.61 0.000171919 700 23 3 30 [+] picture button
RGD1307610_predicted ENSRNOT00000033933 Ribonucleoprotein PTB-binding 2 (Protein raver-2). [Source:Uniprot/SWISSPROT;Acc:Q9HCJ3]Ribonucleoprotein PTB-binding 2 (Protein raver-2). [Source:Uniprot/SWISSPROT;Acc:Q9HCJ3] BY ORTHOLOGY TO:ENSMODT00000001519
15.9716 -17.23 0.000174215 700 15 7 22 [+] picture button
Sema3g ENSRNOT00000025656 Semaphorin 3G (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5CCT7]
16.179 -23.53 0.000175429 700 15 3 19 [+] picture button
Hnrpu ENSRNOT00000044477 heterogeneous nuclear ribonucleoprotein U [Source:RefSeq_peptide;Acc:NP_476480]
14.4608 -18.49 0.000196841 780 17 9 26 [+] picture button
Echs1 ENSRNOT00000025446 Enoyl-CoA hydratase, mitochondrial precursor (EC 4.2.1.17) (Short chain enoyl-CoA hydratase) (SCEH) (Enoyl-CoA hydratase 1). [Source:Uniprot/SWISSPROT;Acc:P14604]
14.9362 -12.18 0.000207527 572 20 3 34 [+] picture button
Farsla ENSRNOT00000004370 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) (Phenylalanine--tRNA ligase alpha chain) (PheRS). [Source:Uniprot/SWISSPROT;Acc:Q505J8]
15.0088 -22.05 0.000221906 258 16 7 69 [+] picture button
Rax ENSRNOT00000022784 Retinal homeobox protein Rx (Retina and anterior neural fold homeobox protein). [Source:Uniprot/SWISSPROT;Acc:Q9JLT7]
14.1048 -18.47 0.000226403 700 15 4 26 [+] picture button
MGC94600 ENSRNOT00000028046 scotin [Source:RefSeq_peptide;Acc:NP_001006990]
14.4398 -16.13 0.000240819 974 17 3 21 [+] picture button
Slit1 ENSRNOT00000034758 Slit homolog 1 protein precursor (Slit-1) (Multiple epidermal growth factor-like domains 4). [Source:Uniprot/SWISSPROT;Acc:O88279]
15.1225 -16.72 0.000248578 195 11 7 51 [+] picture button
Slc6a7 ENSRNOT00000025209 Sodium-dependent proline transporter (Solute carrier family 6 member 7). [Source:Uniprot/SWISSPROT;Acc:P28573]
15.1947 -21.94 0.000258447 723 13 3 24 [+] picture button
Mrps18b ENSRNOT00000001058 mitochondrial ribosomal protein S18B [Source:RefSeq_peptide;Acc:NP_997699]
14.6677 -23.06 0.000268183 266 15 4 55 [+] picture button

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