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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-7b

924 hits found.


Page 1 of 19
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Cno ENSRNOT00000008127 Cno protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5BJZ8]
16.8065 -16.3 0.000000000772105 629 17 5 26 [+] picture button
RGD1307343 ENSRNOT00000043536 Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein. [Source:Uniprot/SWISSPROT;Acc:Q66HH4]
17.2868 -20.62 0.000000000808441 700 18 8 29 [+] picture button
MGC124992 ENSRNOT00000020377 MGC124992 protein. [Source:Uniprot/SPTREMBL;Acc:Q3ZAU3]
17.8598 -18.07 0.000000292359 700 11 4 15 [+] picture button
LOC313391 ENSRNOT00000011631 Cysteine protease ATG4C (EC 3.4.22.-) (Autophagy-related protein 4 homolog C) (Autophagin-3) (Autophagy-related cysteine endopeptidase 3) (AUT-like 3 cysteine endopeptidase). [Source:Uniprot/SWISSPROT;Acc:Q96DT6]Cysteine protease ATG4C (EC 3.4.22.-) (Autophagy-related protein 4 homolog C) (Autophagin-3) (Autophagy-related cysteine endopeptidase 3) (AUT-like 3 cysteine endopeptidase). [Source:Uniprot/SWISSPROT;Acc:Q96DT6] BY ORTHOLOGY TO:ENST00000317868
17.1055 -20.59 0.000000416163 700 15 3 21 [+] picture button
RGD1307752 ENSRNOT00000027539 RAB5-interacting protein [Source:RefSeq_peptide;Acc:NP_001013944]
17.9512 -17.12 0.000000770225 477 21 8 42 [+] picture button
Snca ENSRNOT00000042485 Alpha-synuclein. [Source:Uniprot/SWISSPROT;Acc:P37377]
19.9111 -21.5 0.00000122993 150 8 7 20 [+] picture button
Vps26 ENSRNOT00000042549 Vacuolar protein sorting-associated protein 26A (Vesicle protein sorting 26A). [Source:Uniprot/SWISSPROT;Acc:Q6AY86]
17.5354 -16.71 0.0000030287 199 11 7 36 [+] picture button
Usp52 ENSRNOT00000050792 PAB-dependent poly(A)-specific ribonuclease subunit 2 (EC 3.1.13.4) (Inactive ubiquitin carboxyl-terminal hydrolase 52). [Source:Uniprot/SWISSPROT;Acc:Q6IE70]
16.9307 -17.16 0.0000052375 700 17 5 25 [+] picture button
Aldh6a1 ENSRNOT00000015545 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial precursor (EC 1.2.1.27) (MMSDH) (Malonate-semialdehyde dehydrogenase [acylating]) (EC 1.2.1.18). [Source:Uniprot/SWISSPROT;Acc:Q02253]
16.7882 -14.19 0.00000581139 311 16 4 43 [+] picture button
RGD1560514_predicted ENSRNOT00000036418 AOAH protein. [Source:Uniprot/SPTREMBL;Acc:Q08DV1]AOAH protein. [Source:Uniprot/SPTREMBL;Acc:Q08DV1] BY ORTHOLOGY TO:ENSBTAT00000034676
16.4824 -15.77 0.00000611856 700 14 4 20 [+] picture button
Wdr47 ENSRNOT00000027558 Wdr47 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5BJR0]
16.8274 -20.41 0.0000110048 700 17 8 23 [+] picture button
Defb17 ENSRNOT00000060793 beta-defensin 17 [Source:RefSeq_peptide;Acc:NP_001032623]
17.0339 -20.35 0.0000150537 700 16 5 18 [+] picture button
Arrdc2 ENSRNOT00000025956 Arrestin domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q8TBH0]Arrestin domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q8TBH0] BY ORTHOLOGY TO:SINFRUT00000133851
17.8598 -18.73 0.0000170746 700 17 3 28 [+] picture button
Lmnb1 ENSRNOT00000019351 Lamin-B1. [Source:Uniprot/SWISSPROT;Acc:P70615]
17.5354 -18.31 0.0000193166 60 3 7 11 [+] picture button
Tm7sf4_predicted ENSRNOT00000006243 Transmembrane 7 superfamily member 4 (Dendritic cell-specific transmembrane protein) (DC-STAMP) (IL-4-induced protein) (FIND). [Source:Uniprot/SWISSPROT;Acc:Q9H295]Transmembrane 7 superfamily member 4 (Dendritic cell-specific transmembrane protein) (DC-STAMP) (IL-4-induced protein) (FIND). [Source:Uniprot/SWISSPROT;Acc:Q9H295] BY ORTHOLOGY TO:SINFRUT00000130745
16.2517 -16.37 0.0000209203 700 15 5 22 [+] picture button
Sdccag8 ENSRNOT00000005647 serologically defined colon cancer antigen 8 [Source:RefSeq_peptide;Acc:NP_808790]
17.6485 -14.79 0.0000214704 281 15 4 49 [+] picture button
Parp1 ENSRNOT00000004232 Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1) (ADPRT) (NAD(+) ADP-ribosyltransferase 1) (Poly[ADP-ribose] synthetase 1). [Source:Uniprot/SWISSPROT;Acc:P27008]
16.1766 -21.2 0.0000325317 435 20 6 50 [+] picture button
Slc26a2 ENSRNOT00000024374 Sulfate transporter (Diastrophic dysplasia protein homolog) (Solute carrier family 26 member 2). [Source:Uniprot/SWISSPROT;Acc:O70531]
17.7616 -14.2 0.000032948 150 8 3 39 [+] picture button
Zfp503_predicted ENSRNOT00000019644 zinc finger protein 503 [Source:RefSeq_peptide;Acc:NP_116161]zinc finger protein 503 [Source:RefSeq_peptide;Acc:NP_116161] BY ORTHOLOGY TO:ENSGALT00000007999
17.3809 -22.36 0.0000339793 923 14 8 18 [+] picture button
Nr1h2 ENSRNOT00000026862 Oxysterols receptor LXR-beta (Liver X receptor beta) (Nuclear orphan receptor LXR-beta) (Ubiquitously-expressed nuclear receptor) (UR) (Orphan nuclear receptor OR-1). [Source:Uniprot/SWISSPROT;Acc:Q62755]
17.4572 -19.12 0.000036405 370 18 5 37 [+] picture button
Tbc1d12_predicted ENSRNOT00000017812 Lymphoid-specific helicase (EC 3.6.1.-) (SWI/SNF2-related matrix- associated actin-dependent regulator of chromatin subfamily A member 6) (Proliferation-associated SNF2-like protein). [Source:Uniprot/SWISSPROT;Acc:Q9NRZ9]Lymphoid-specific helicase (EC 3.6.1.-) (SWI/SNF2-related matrix- associated actin-dependent regulator of chromatin subfamily A member 6) (Proliferation-associated SNF2-like protein). [Source:Uniprot/SWISSPROT;Acc:Q9NRZ9] BY ORTHOLOGY TO:ENSORLT00000001208
17.6533 -17.84 0.0000364119 700 17 7 29 [+] picture button
Polr2j_predicted ENSRNOT00000001941 DNA-directed RNA polymerase II subunit J (EC 2.7.7.6). [Source:Uniprot/SWISSPROT;Acc:Q7PVQ9]DNA-directed RNA polymerase II subunit J (EC 2.7.7.6). [Source:Uniprot/SWISSPROT;Acc:Q7PVQ9] BY ORTHOLOGY TO:AGAP009209-RA
17.3436 -19.51 0.0000366586 700 19 2 23 [+] picture button
Myh9 ENSRNOT00000007398 Myosin-9 (Myosin heavy chain 9) (Myosin heavy chain, nonmuscle IIa) (Nonmuscle myosin heavy chain IIa) (NMMHC II-a) (NMMHC-IIA) (Cellular myosin heavy chain, type A) (Nonmuscle myosin heavy chain-A) (NMMHC- A). [Source:Uniprot/SWISSPROT;Acc:Q62812]
17.7616 -17.28 0.0000500604 156 7 4 25 [+] picture button
rnf141 ENSRNOT00000055149 RING finger protein 141. [Source:Uniprot/SWISSPROT;Acc:Q6IV57]
16.6209 -14.39 0.0000515291 700 14 4 18 [+] picture button
Tpte_predicted ENSRNOT00000034670 transmembrane phosphatase with tensin homology [Source:RefSeq_peptide;Acc:NP_001020629]transmembrane phosphatase with tensin homology [Source:RefSeq_peptide;Acc:NP_001020629] BY ORTHOLOGY TO:ENSDART00000079549
16.9307 -17.56 0.0000543075 700 12 2 18 [+] picture button
RGD1562333_predicted ENSRNOT00000021152 whn-dependent transcript 2 [Source:RefSeq_peptide;Acc:NP_060470]whn-dependent transcript 2 [Source:RefSeq_peptide;Acc:NP_060470] BY ORTHOLOGY TO:ENSGACT00000010279
17.7565 -19.04 0.0000700416 700 13 3 21 [+] picture button
Fahd1 ENSRNOT00000019767 Fumarylacetoacetate hydrolase domain-containing protein 1 (EC 3.-.-.-). [Source:Uniprot/SWISSPROT;Acc:Q6AYQ8]
16.5177 -17.42 0.0000740189 700 16 3 22 [+] picture button
RGD1560908_predicted ENSRNOT00000024993 Eukaryotic translation initiation factor 4E transporter (eIF4E transporter) (4E-T) (Eukaryotic translation initiation factor 4E nuclear import factor 1). [Source:Uniprot/SWISSPROT;Acc:Q9NRA8]Eukaryotic translation initiation factor 4E transporter (eIF4E transporter) (4E-T) (Eukaryotic translation initiation factor 4E nuclear import factor 1). [Source:Uniprot/SWISSPROT;Acc:Q9NRA8] BY ORTHOLOGY TO:SINFRUT00000150769
16.26 -12.27 0.0000752466 499 17 6 32 [+] picture button
Id3 ENSRNOT00000035788 DNA-binding protein inhibitor ID-3 (Inhibitor of DNA binding 3). [Source:Uniprot/SWISSPROT;Acc:P41138]
17.0886 -17.73 0.0000777905 545 19 6 31 [+] picture button
Slc3a2 ENSRNOT00000025196 4F2 cell-surface antigen heavy chain (4F2hc). [Source:Uniprot/SWISSPROT;Acc:Q794F9]
16.1778 -11.12 0.0000823275 160 6 4 22 [+] picture button
ENSRNOT00000047091 NOT ANNOTATED
16.6209 -18.39 0.0000840691 700 11 1 11 [+] picture button
Smpdl3a ENSRNOT00000001081 Acid sphingomyelinase-like phosphodiesterase 3a precursor (EC 3.1.4.-) (ASM-like phosphodiesterase 3a). [Source:Uniprot/SWISSPROT;Acc:Q641Z7]
18.0276 -17.47 0.0000855964 311 20 5 57 [+] picture button
LOC246263 ENSRNOT00000055084 kidney-specific protein (KS) [Source:RefSeq_peptide;Acc:NP_653349]
16.4356 -13.42 0.0000870495 601 16 2 25 [+] picture button
Eif2s1 ENSRNOT00000013375 Eukaryotic translation initiation factor 2 subunit 1 (Eukaryotic translation initiation factor 2 subunit alpha) (eIF-2-alpha) (EIF- 2alpha) (EIF-2A). [Source:Uniprot/SWISSPROT;Acc:P68101]
17.9589 -16.06 0.0000886994 402 16 6 30 [+] picture button
Sox8_predicted ENSRNOT00000025494 Transcription factor Sox 8. [Source:Uniprot/SPTREMBL;Acc:Q6IZ48]Transcription factor Sox 8. [Source:Uniprot/SPTREMBL;Acc:Q6IZ48] BY ORTHOLOGY TO:GSTENT00018540001
16.4356 -19.37 0.0000924332 610 17 3 27 [+] picture button
ENSRNOT00000037200 NOT ANNOTATED
17.0023 -15.9 0.000120519 700 11 1 12 [+] picture button
LOC680751 ENSRNOT00000028816 Transcription factor COE4 (Early B-cell factor 4) (EBF-4) (Olf-1/EBF- like 4) (OE-4) (O/E-4). [Source:Uniprot/SWISSPROT;Acc:Q9BQW3]Transcription factor COE4 (Early B-cell factor 4) (EBF-4) (Olf-1/EBF- like 4) (OE-4) (O/E-4). [Source:Uniprot/SWISSPROT;Acc:Q9BQW3] BY ORTHOLOGY TO:ENST00000380648
17.2404 -21.31 0.000135254 700 19 3 24 [+] picture button
RGD1559610_predicted ENSRNOT00000009882 Probable U3 small nucleolar RNA-associated protein 11 (U3 snoRNA- associated protein 11) (UTP11-like protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y3A2]Probable U3 small nucleolar RNA-associated protein 11 (U3 snoRNA- associated protein 11) (UTP11-like protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y3A2] BY ORTHOLOGY TO:ENSMODT00000022477
16.5097 -16.53 0.000138738 489 18 3 35 [+] picture button
Olr655_predicted ENSRNOT00000047251 olfactory receptor Olr655 [Source:RefSeq_peptide;Acc:NP_001000342]
16.4236 -16.88 0.000142643 700 5 1 4 [+] picture button
Gkap1 ENSRNOT00000026070 G kinase anchoring protein 1 [Source:RefSeq_peptide;Acc:NP_001012160]
16.8566 -19.96 0.000153201 259 13 5 33 [+] picture button
Alg6 ENSRNOT00000057874 Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase (EC 2.4.1.-) (Dolichyl-P-Glc:Man9GlcNAc2-PP-dolichyl glucosyltransferase). [Source:Uniprot/SWISSPROT;Acc:Q3T1L5]
16.744 -17.22 0.000164046 700 9 2 14 [+] picture button
Rps9 ENSRNOT00000015234 40S ribosomal protein S9. [Source:Uniprot/SWISSPROT;Acc:P29314]
17.7616 -14.99 0.000203228 70 3 7 14 [+] picture button
Ctsk ENSRNOT00000028730 Cathepsin K precursor (EC 3.4.22.38). [Source:Uniprot/SWISSPROT;Acc:O35186]
18.3236 -18.85 0.000214881 354 18 4 56 [+] picture button
NP_942086.1 ENSRNOT00000035781 toll-like receptor 3 [Source:RefSeq_peptide;Acc:NP_942086]
16.7435 -14.1 0.000215395 295 15 3 40 [+] picture button
Dcn ENSRNOT00000006070 Decorin precursor (Bone proteoglycan II) (PG-S2) (PG40) (Dermatan sulfate proteoglycan-II) (DSPG). [Source:Uniprot/SWISSPROT;Acc:Q01129]
18.1945 -20.01 0.000216638 503 12 4 22 [+] picture button
RGD1560911_predicted ENSRNOT00000025964 EF-hand calcium-binding domain-containing protein 4A. [Source:Uniprot/SWISSPROT;Acc:Q8N4Y2]EF-hand calcium-binding domain-containing protein 4A. [Source:Uniprot/SWISSPROT;Acc:Q8N4Y2] BY ORTHOLOGY TO:ENSORLT00000008121
16.1778 -18.93 0.000221527 213 11 4 28 [+] picture button
Otos ENSRNOT00000022220 Otospiralin precursor. [Source:Uniprot/SWISSPROT;Acc:Q8K560]
17.0828 -20.76 0.000233684 116 5 3 28 [+] picture button
RGD1563568_predicted ENSRNOT00000010596 Serine/threonine-protein kinase MST4 (EC 2.7.11.1) (STE20-like kinase MST4) (MST-4) (Mammalian STE20-like protein kinase 4) (Serine/threonine-protein kinase MASK) (Mst3 and SOK1-related kinase). [Source:Uniprot/SWISSPROT;Acc:Q9P289]Serine/threonine-protein kinase MST4 (EC 2.7.11.1) (STE20-like kinase MST4) (MST-4) (Mammalian STE20-like protein kinase 4) (Serine/threonine-protein kinase MASK) (Mst3 and SOK1-related kinase). [Source:Uniprot/SWISSPROT;Acc:Q9P289] BY ORTHOLOGY TO:ENST00000370887
17.4942 -19.97 0.000256244 700 19 4 27 [+] picture button
RGD1562246_predicted ENSRNOT00000010955 DNA replication complex GINS protein PSF1. [Source:Uniprot/SWISSPROT;Acc:Q14691]DNA replication complex GINS protein PSF1. [Source:Uniprot/SWISSPROT;Acc:Q14691] BY ORTHOLOGY TO:ENSOANT00000006537
16.5425 -12.03 0.000261304 334 17 3 53 [+] picture button
RGD1311667 ENSRNOT00000049742 similar to RIKEN cDNA 4921504I05 (RGD1311667), mRNA [Source:RefSeq_dna;Acc:NM_001029913]
16.5172 -12.23 0.00027911 287 14 5 39 [+] picture button

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