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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-7a

909 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Cno ENSRNOT00000008127 Cno protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5BJZ8]
17.2241 -19.02 7.72105e-10 629 17 5 26 [+] picture button
RGD1307343 ENSRNOT00000043536 Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein. [Source:Uniprot/SWISSPROT;Acc:Q66HH4]
18.115 -25.67 8.08441e-10 700 18 8 29 [+] picture button
Gli3 ENSRNOT00000019396 Zinc finger transcription factor GLI3 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q91WY5]
16.5278 -20.22 2.40701e-08 700 14 10 18 [+] picture button
RGD1306954 ENSRNOT00000030279 similar to RIKEN cDNA 1110004E09 (RGD1306954), mRNA [Source:RefSeq_dna;Acc:NM_001008288]
16.8566 -14.22 1.71531e-07 176 8 6 31 [+] picture button
MGC124992 ENSRNOT00000020377 MGC124992 protein. [Source:Uniprot/SPTREMBL;Acc:Q3ZAU3]
17.3436 -18.55 2.92359e-07 700 11 4 15 [+] picture button
LOC313391 ENSRNOT00000011631 Cysteine protease ATG4C (EC 3.4.22.-) (Autophagy-related protein 4 homolog C) (Autophagin-3) (Autophagy-related cysteine endopeptidase 3) (AUT-like 3 cysteine endopeptidase). [Source:Uniprot/SWISSPROT;Acc:Q96DT6]Cysteine protease ATG4C (EC 3.4.22.-) (Autophagy-related protein 4 homolog C) (Autophagin-3) (Autophagy-related cysteine endopeptidase 3) (AUT-like 3 cysteine endopeptidase). [Source:Uniprot/SWISSPROT;Acc:Q96DT6] BY ORTHOLOGY TO:ENST00000317868
16.266 -19.31 4.16163e-07 700 15 3 21 [+] picture button
RGD1307752 ENSRNOT00000027539 RAB5-interacting protein [Source:RefSeq_peptide;Acc:NP_001013944]
17.0912 -15.83 7.70225e-07 477 21 8 42 [+] picture button
Snca ENSRNOT00000042485 Alpha-synuclein. [Source:Uniprot/SWISSPROT;Acc:P37377]
19.0061 -20.89 1.22993e-06 150 8 7 20 [+] picture button
Vps26 ENSRNOT00000042549 Vacuolar protein sorting-associated protein 26A (Vesicle protein sorting 26A). [Source:Uniprot/SWISSPROT;Acc:Q6AY86]
18.4404 -21.58 3.0287e-06 199 11 7 36 [+] picture button
Usp52 ENSRNOT00000050792 PAB-dependent poly(A)-specific ribonuclease subunit 2 (EC 3.1.13.4) (Inactive ubiquitin carboxyl-terminal hydrolase 52). [Source:Uniprot/SWISSPROT;Acc:Q6IE70]
16.9307 -18.81 5.2375e-06 700 17 5 25 [+] picture button
RGD1560514_predicted ENSRNOT00000036418 AOAH protein. [Source:Uniprot/SPTREMBL;Acc:Q08DV1]AOAH protein. [Source:Uniprot/SPTREMBL;Acc:Q08DV1] BY ORTHOLOGY TO:ENSBTAT00000034676
16.4824 -15.77 6.11856e-06 700 14 4 20 [+] picture button
Rhoh ENSRNOT00000003425 ras homolog gene family, member H [Source:RefSeq_peptide;Acc:NP_001013448]
16.7954 -13.21 8.92046e-06 349 17 4 34 [+] picture button
Wdr47 ENSRNOT00000027558 Wdr47 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5BJR0]
16.3112 -18.14 1.10048e-05 700 17 8 23 [+] picture button
Defb17 ENSRNOT00000060793 beta-defensin 17 [Source:RefSeq_peptide;Acc:NP_001032623]
16.6209 -18.58 1.50537e-05 700 16 5 18 [+] picture button
Arrdc2 ENSRNOT00000025956 Arrestin domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q8TBH0]Arrestin domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q8TBH0] BY ORTHOLOGY TO:SINFRUT00000133851
17.3436 -18.73 1.70746e-05 700 17 3 28 [+] picture button
Lmnb1 ENSRNOT00000019351 Lamin-B1. [Source:Uniprot/SWISSPROT;Acc:P70615]
17.5354 -18.31 1.93166e-05 60 3 7 11 [+] picture button
Sdccag8 ENSRNOT00000005647 serologically defined colon cancer antigen 8 [Source:RefSeq_peptide;Acc:NP_808790]
16.7435 -12.43 2.14704e-05 281 15 4 49 [+] picture button
Hs3st5_predicted ENSRNOT00000000743 heparan sulphate sulfotransferaseheparan sulphate sulfotransferase BY ORTHOLOGY TO:AAEL001458-RA
16.5177 -20.13 2.43089e-05 700 16 9 32 [+] picture button
Pqlc3 ENSRNOT00000007071 PQ loop repeat containing 3 [Source:RefSeq_peptide;Acc:NP_001030124]
16.4368 -18.07 3.27575e-05 1124 13 4 14 [+] picture button
Slc26a2 ENSRNOT00000024374 Sulfate transporter (Diastrophic dysplasia protein homolog) (Solute carrier family 26 member 2). [Source:Uniprot/SWISSPROT;Acc:O70531]
17.5354 -15.18 3.2948e-05 150 8 3 39 [+] picture button
Zfp503_predicted ENSRNOT00000019644 zinc finger protein 503 [Source:RefSeq_peptide;Acc:NP_116161]zinc finger protein 503 [Source:RefSeq_peptide;Acc:NP_116161] BY ORTHOLOGY TO:ENSGALT00000007999
16.8757 -20.58 3.39793e-05 923 14 8 18 [+] picture button
Nr1h2 ENSRNOT00000026862 Oxysterols receptor LXR-beta (Liver X receptor beta) (Nuclear orphan receptor LXR-beta) (Ubiquitously-expressed nuclear receptor) (UR) (Orphan nuclear receptor OR-1). [Source:Uniprot/SWISSPROT;Acc:Q62755]
17.7908 -19.65 3.6405e-05 370 18 5 37 [+] picture button
Tbc1d12_predicted ENSRNOT00000017812 Lymphoid-specific helicase (EC 3.6.1.-) (SWI/SNF2-related matrix- associated actin-dependent regulator of chromatin subfamily A member 6) (Proliferation-associated SNF2-like protein). [Source:Uniprot/SWISSPROT;Acc:Q9NRZ9]Lymphoid-specific helicase (EC 3.6.1.-) (SWI/SNF2-related matrix- associated actin-dependent regulator of chromatin subfamily A member 6) (Proliferation-associated SNF2-like protein). [Source:Uniprot/SWISSPROT;Acc:Q9NRZ9] BY ORTHOLOGY TO:ENSORLT00000001208
17.6533 -17.84 3.64119e-05 700 17 7 29 [+] picture button
Polr2j_predicted ENSRNOT00000001941 DNA-directed RNA polymerase II subunit J (EC 2.7.7.6). [Source:Uniprot/SWISSPROT;Acc:Q7PVQ9]DNA-directed RNA polymerase II subunit J (EC 2.7.7.6). [Source:Uniprot/SWISSPROT;Acc:Q7PVQ9] BY ORTHOLOGY TO:AGAP009209-RA
16.5177 -16.96 3.66586e-05 700 19 2 23 [+] picture button
Myh9 ENSRNOT00000007398 Myosin-9 (Myosin heavy chain 9) (Myosin heavy chain, nonmuscle IIa) (Nonmuscle myosin heavy chain IIa) (NMMHC II-a) (NMMHC-IIA) (Cellular myosin heavy chain, type A) (Nonmuscle myosin heavy chain-A) (NMMHC- A). [Source:Uniprot/SWISSPROT;Acc:Q62812]
17.7616 -17.28 5.00604e-05 156 7 4 25 [+] picture button
Tpte_predicted ENSRNOT00000034670 transmembrane phosphatase with tensin homology [Source:RefSeq_peptide;Acc:NP_001020629]transmembrane phosphatase with tensin homology [Source:RefSeq_peptide;Acc:NP_001020629] BY ORTHOLOGY TO:ENSDART00000079549
16.9307 -17.56 5.43075e-05 700 12 2 18 [+] picture button
RGD1562333_predicted ENSRNOT00000021152 whn-dependent transcript 2 [Source:RefSeq_peptide;Acc:NP_060470]whn-dependent transcript 2 [Source:RefSeq_peptide;Acc:NP_060470] BY ORTHOLOGY TO:ENSGACT00000010279
16.9307 -18.05 7.00416e-05 700 13 3 21 [+] picture button
Id3 ENSRNOT00000035788 DNA-binding protein inhibitor ID-3 (Inhibitor of DNA binding 3). [Source:Uniprot/SWISSPROT;Acc:P41138]
17.9377 -22.78 7.77905e-05 545 19 6 31 [+] picture button
LOC686450 ENSRNOT00000039720 Uncharacterized protein C5orf29. [Source:Uniprot/SWISSPROT;Acc:Q8N292]Uncharacterized protein C5orf29. [Source:Uniprot/SWISSPROT;Acc:Q8N292] BY ORTHOLOGY TO:ENST00000318469
16.8626 -18.13 7.88563e-05 700 15 5 22 [+] picture button
Slc3a2 ENSRNOT00000025196 4F2 cell-surface antigen heavy chain (4F2hc). [Source:Uniprot/SWISSPROT;Acc:Q794F9]
17.0828 -16.17 8.23275e-05 160 6 4 22 [+] picture button
ENSRNOT00000047091 NOT ANNOTATED
16.4145 -19.71 8.40691e-05 700 11 1 11 [+] picture button
Smpdl3a ENSRNOT00000001081 Acid sphingomyelinase-like phosphodiesterase 3a precursor (EC 3.1.4.-) (ASM-like phosphodiesterase 3a). [Source:Uniprot/SWISSPROT;Acc:Q641Z7]
18.929 -18.38 8.55964e-05 311 20 5 57 [+] picture button
LOC246263 ENSRNOT00000055084 kidney-specific protein (KS) [Source:RefSeq_peptide;Acc:NP_653349]
17.2839 -16.31 8.70495e-05 601 16 2 25 [+] picture button
Eif2s1 ENSRNOT00000013375 Eukaryotic translation initiation factor 2 subunit 1 (Eukaryotic translation initiation factor 2 subunit alpha) (eIF-2-alpha) (EIF- 2alpha) (EIF-2A). [Source:Uniprot/SWISSPROT;Acc:P68101]
17.0829 -13.35 8.86994e-05 402 16 6 30 [+] picture button
RGD1559742_predicted ENSRNOT00000025927 Janus kinase and microtubule-interacting protein 2. [Source:Uniprot/SWISSPROT;Acc:Q96AA8]Janus kinase and microtubule-interacting protein 2. [Source:Uniprot/SWISSPROT;Acc:Q96AA8] BY ORTHOLOGY TO:SINFRUT00000136579
16.6209 -18.12 0.000104345 700 12 2 18 [+] picture button
ENSRNOT00000037200 NOT ANNOTATED
17.0023 -15.76 0.000120519 700 11 1 12 [+] picture button
LOC680751 ENSRNOT00000028816 Transcription factor COE4 (Early B-cell factor 4) (EBF-4) (Olf-1/EBF- like 4) (OE-4) (O/E-4). [Source:Uniprot/SWISSPROT;Acc:Q9BQW3]Transcription factor COE4 (Early B-cell factor 4) (EBF-4) (Olf-1/EBF- like 4) (OE-4) (O/E-4). [Source:Uniprot/SWISSPROT;Acc:Q9BQW3] BY ORTHOLOGY TO:ENST00000380648
16.4145 -16.81 0.000135254 700 19 3 24 [+] picture button
RGD1559610_predicted ENSRNOT00000009882 Probable U3 small nucleolar RNA-associated protein 11 (U3 snoRNA- associated protein 11) (UTP11-like protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y3A2]Probable U3 small nucleolar RNA-associated protein 11 (U3 snoRNA- associated protein 11) (UTP11-like protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y3A2] BY ORTHOLOGY TO:ENSMODT00000022477
16.5097 -17.97 0.000138738 489 18 3 35 [+] picture button
Olr655_predicted ENSRNOT00000047251 olfactory receptor Olr655 [Source:RefSeq_peptide;Acc:NP_001000342]
16.7394 -17.18 0.000142643 700 5 1 4 [+] picture button
Gkap1 ENSRNOT00000026070 G kinase anchoring protein 1 [Source:RefSeq_peptide;Acc:NP_001012160]
17.7616 -20.89 0.000153201 259 13 5 33 [+] picture button
Alg6 ENSRNOT00000057874 Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase (EC 2.4.1.-) (Dolichyl-P-Glc:Man9GlcNAc2-PP-dolichyl glucosyltransferase). [Source:Uniprot/SWISSPROT;Acc:Q3T1L5]
17.5709 -17.6 0.000164046 700 9 2 14 [+] picture button
Rps9 ENSRNOT00000015234 40S ribosomal protein S9. [Source:Uniprot/SWISSPROT;Acc:P29314]
18.6667 -19.08 0.000203228 70 3 7 14 [+] picture button
Ctsk ENSRNOT00000028730 Cathepsin K precursor (EC 3.4.22.38). [Source:Uniprot/SWISSPROT;Acc:O35186]
18.3236 -18.85 0.000214881 354 18 4 56 [+] picture button
NP_942086.1 ENSRNOT00000035781 toll-like receptor 3 [Source:RefSeq_peptide;Acc:NP_942086]
16.8566 -14.24 0.000215395 295 15 3 40 [+] picture button
Dcn ENSRNOT00000006070 Decorin precursor (Bone proteoglycan II) (PG-S2) (PG40) (Dermatan sulfate proteoglycan-II) (DSPG). [Source:Uniprot/SWISSPROT;Acc:Q01129]
17.3281 -18.66 0.000216638 503 12 4 22 [+] picture button
Hibadh ENSRNOT00000011069 3-hydroxyisobutyrate dehydrogenase, mitochondrial precursor (EC 1.1.1.31) (HIBADH). [Source:Uniprot/SWISSPROT;Acc:P29266]
16.7022 -19.41 0.000219734 709 15 3 20 [+] picture button
Tomm70a ENSRNOT00000002238 Mitochondrial precursor proteins import receptor (Translocase of outer membrane TOM70). [Source:Uniprot/SWISSPROT;Acc:Q75Q39]
16.0647 -16.99 0.000223353 293 17 6 66 [+] picture button
Otos ENSRNOT00000022220 Otospiralin precursor. [Source:Uniprot/SWISSPROT;Acc:Q8K560]
17.0828 -20.76 0.000233684 116 5 3 28 [+] picture button
RGD1563568_predicted ENSRNOT00000010596 Serine/threonine-protein kinase MST4 (EC 2.7.11.1) (STE20-like kinase MST4) (MST-4) (Mammalian STE20-like protein kinase 4) (Serine/threonine-protein kinase MASK) (Mst3 and SOK1-related kinase). [Source:Uniprot/SWISSPROT;Acc:Q9P289]Serine/threonine-protein kinase MST4 (EC 2.7.11.1) (STE20-like kinase MST4) (MST-4) (Mammalian STE20-like protein kinase 4) (Serine/threonine-protein kinase MASK) (Mst3 and SOK1-related kinase). [Source:Uniprot/SWISSPROT;Acc:Q9P289] BY ORTHOLOGY TO:ENST00000370887
16.6611 -14.95 0.000256244 700 19 4 27 [+] picture button
RGD1562246_predicted ENSRNOT00000010955 DNA replication complex GINS protein PSF1. [Source:Uniprot/SWISSPROT;Acc:Q14691]DNA replication complex GINS protein PSF1. [Source:Uniprot/SWISSPROT;Acc:Q14691] BY ORTHOLOGY TO:ENSOANT00000006537
16.5425 -12.03 0.000261304 334 17 3 53 [+] picture button

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Download table: GFF TXT
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