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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-34c*

794 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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A430110N23Rik ENSRNOT00000022480 RIKEN cDNA A430110N23 gene [Source:MarkerSymbol;Acc:MGI:3606211]
15.695 -13.53 1e-06 700 26 2 31 [+] picture button
LOC683501 ENSRNOT00000042908 Uncharacterized protein C8orf48. [Source:Uniprot/SPTREMBL;Acc:Q96LL4]Uncharacterized protein C8orf48. [Source:Uniprot/SPTREMBL;Acc:Q96LL4] BY ORTHOLOGY TO:ENSBTAT00000048260
15.8965 -10.44 3.85706e-05 700 21 3 34 [+] picture button
ENSRNOT00000056597 NOT ANNOTATED
15.7642 -22.67 5.83333e-05 700 19 1 24 [+] picture button
Tuba6 ENSRNOT00000020932 Tubulin alpha-1C chain (Tubulin alpha-6 chain) (Alpha-tubulin 6). [Source:Uniprot/SWISSPROT;Acc:Q6AYZ1]
15.9805 -21.05 7.4481e-05 700 16 2 26 [+] picture button
LOC681067 ENSRNOT00000056921 similar to RIKEN cDNA 1700001F22 (LOC681245), mRNA [Source:RefSeq_dna;Acc:XR_006008]
15.8679 -22.71 7.70741e-05 700 15 1 22 [+] picture button
LOC679802 ENSRNOT00000038873 NOT ANNOTATED
16.8213 -17.39 0.000164503 700 10 1 12 [+] picture button
Hnrpa0 ENSRNOT00000061231 heterogeneous nuclear ribonucleoprotein A0 [Source:MarkerSymbol;Acc:MGI:1924384]
17.4234 -19.36 0.000242403 700 16 8 27 [+] picture button
Dmrt2_predicted ENSRNOT00000021828 Doublesex- and mab-3-related transcription factor 2 (Doublesex-like 2 protein) (DSXL-2). [Source:Uniprot/SWISSPROT;Acc:Q9Y5R5]Doublesex- and mab-3-related transcription factor 2 (Doublesex-like 2 protein) (DSXL-2). [Source:Uniprot/SWISSPROT;Acc:Q9Y5R5] BY ORTHOLOGY TO:ENSMODT00000004280
17.1205 -18.13 0.000317378 700 14 1 23 [+] picture button
Adamts6_predicted ENSRNOT00000016997 ADAMTS-6 precursor (EC 3.4.24.-) (A disintegrin and metalloproteinase with thrombospondin motifs 6) (ADAM-TS 6) (ADAM-TS6). [Source:Uniprot/SWISSPROT;Acc:Q9UKP5]ADAMTS-6 precursor (EC 3.4.24.-) (A disintegrin and metalloproteinase with thrombospondin motifs 6) (ADAM-TS 6) (ADAM-TS6). [Source:Uniprot/SWISSPROT;Acc:Q9UKP5] BY ORTHOLOGY TO:ENSGALT00000023786
16.905 -19.21 0.000447857 700 20 2 29 [+] picture button
Il1r2 ENSRNOT00000019415 Interleukin-1 receptor type II precursor (IL-1R-2) (IL-1R-beta) (CD121b antigen). [Source:Uniprot/SWISSPROT;Acc:P43303]
16.0753 -15.49 0.000497318 700 17 4 21 [+] picture button
RGD1304587 ENSRNOT00000004011 Multiple myeloma tumor-associated protein 2 homolog. [Source:Uniprot/SWISSPROT;Acc:Q5M9I6]
15.7865 -20.78 0.000623977 424 19 5 40 [+] picture button
Chi3l4_predicted ENSRNOT00000055966 NOT ANNOTATED
17.0087 -25.7 0.000656743 700 12 1 13 [+] picture button
RGD1566225_predicted ENSRNOT00000046935 NOT ANNOTATED
16.3864 -15.3 0.000656743 700 9 1 16 [+] picture button
Zfp358_predicted ENSRNOT00000001289 Zinc finger protein 358. [Source:Uniprot/SWISSPROT;Acc:Q9NW07]Zinc finger protein 358. [Source:Uniprot/SWISSPROT;Acc:Q9NW07] BY ORTHOLOGY TO:ENSMMUT00000015947
16.6007 -15.9 0.000728399 69 3 6 17 [+] picture button
Stoml3_predicted ENSRNOT00000014765 Stomatin-2. [Source:Uniprot/SWISSPROT;Acc:Q19958]Stomatin-2. [Source:Uniprot/SWISSPROT;Acc:Q19958] BY ORTHOLOGY TO:F32A6.5
14.903 -12.41 0.000792309 851 17 4 25 [+] picture button
Cdk5rap1 ENSRNOT00000021418 CDK5 regulatory subunit-associated protein 1 (CDK5 activator-binding protein C42). [Source:Uniprot/SWISSPROT;Acc:Q9JLH6]
16.6007 -19.46 0.000799062 151 7 5 27 [+] picture button
RGD1311283_predicted ENSRNOT00000000124 Zinc finger protein KIAA1802. [Source:Uniprot/SWISSPROT;Acc:Q96JM3]Zinc finger protein KIAA1802. [Source:Uniprot/SWISSPROT;Acc:Q96JM3] BY ORTHOLOGY TO:ENSMODT00000003897
15.6321 -17.87 0.00087831 700 19 5 56 [+] picture button
ENSRNOT00000056629 NOT ANNOTATED
15.7642 -22.67 0.000960819 700 15 1 23 [+] picture button
ENSRNOT00000056621 NOT ANNOTATED
15.7642 -22.67 0.000960819 700 14 1 23 [+] picture button
ENSRNOT00000056631 NOT ANNOTATED
15.7642 -22.67 0.000960819 700 19 1 25 [+] picture button
LOC678973 ENSRNOT00000056623 NOT ANNOTATED
15.7642 -22.67 0.000960819 700 20 1 28 [+] picture button
E430025E21Rik ENSRNOT00000013315 RIKEN cDNA E430025E21 gene [Source:MarkerSymbol;Acc:MGI:2146110]
16.0753 -23.08 0.00105652 700 22 5 31 [+] picture button
Lrig1_predicted ENSRNOT00000017384 Leucine-rich repeats and immunoglobulin-like domains protein 1 precursor (LIG-1). [Source:Uniprot/SWISSPROT;Acc:Q96JA1]Leucine-rich repeats and immunoglobulin-like domains protein 1 precursor (LIG-1). [Source:Uniprot/SWISSPROT;Acc:Q96JA1] BY ORTHOLOGY TO:SINFRUT00000132578
16.2827 -24.99 0.00107812 700 18 6 28 [+] picture button
Zfp339_predicted ENSRNOT00000009226 Transcription factor Ovo-like 2 (hOvo2) (Zinc finger protein 339). [Source:Uniprot/SWISSPROT;Acc:Q9BRP0]Transcription factor Ovo-like 2 (hOvo2) (Zinc finger protein 339). [Source:Uniprot/SWISSPROT;Acc:Q9BRP0] BY ORTHOLOGY TO:ENST00000278780
15.6826 -14.54 0.00139676 441 18 5 42 [+] picture button
LOC305166 ENSRNOT00000002936 1-acyl-sn-glycerol-3-phosphate acyltransferase theta (EC 2.3.1.51) (Lysophosphatidic acid acyltransferase theta) (LPAAT-theta). [Source:Uniprot/SWISSPROT;Acc:Q4V8J4]
19.2158 -18.34 0.00140984 312 13 4 39 [+] picture button
NP_001014772.1 ENSRNOT00000023243 ADAM metallopeptidase domain 9 [Source:RefSeq_peptide;Acc:NP_001014772]
15.5348 -12.9 0.00146915 700 8 1 9 [+] picture button
Ddc ENSRNOT00000005851 Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC) (DOPA decarboxylase) (DDC). [Source:Uniprot/SWISSPROT;Acc:P14173]
14.7624 -14.74 0.00154945 700 12 4 19 [+] picture button
Pcdhb14_predicted ENSRNOT00000027168 protocadherin beta 14 [Source:MarkerSymbol;Acc:MGI:2136749]protocadherin beta 14 [Source:MarkerSymbol;Acc:MGI:2136749] BY ORTHOLOGY TO:ENSMUST00000052387
17.1711 -15.47 0.00156324 700 9 2 15 [+] picture button
Kif2 ENSRNOT00000019225 Kinesin-like protein KIF2 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9WV63]
16.487 -9.09 0.00171984 251 14 6 38 [+] picture button
Q32ZG4_RAT ENSRNOT00000055412 Beta-defensin 28 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q32ZG4]
16.8013 -20.14 0.00177096 700 12 2 14 [+] picture button
B3gnt4_predicted ENSRNOT00000011286 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 [Source:RefSeq_peptide;Acc:NP_110392]UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 [Source:RefSeq_peptide;Acc:NP_110392] BY ORTHOLOGY TO:ENSOANT00000009928
15.5894 -14.58 0.00178451 700 17 4 22 [+] picture button
Tbx19_predicted ENSRNOT00000004053 T-box 19 [Source:MarkerSymbol;Acc:MGI:1891158]T-box 19 [Source:MarkerSymbol;Acc:MGI:1891158] BY ORTHOLOGY TO:ENSMUST00000027859
16.3864 -21.62 0.00180808 700 17 2 26 [+] picture button
Dao1 ENSRNOT00000000881 D-amino-acid oxidase (EC 1.4.3.3) (DAMOX) (DAO) (DAAO). [Source:Uniprot/SWISSPROT;Acc:O35078]
15.9984 -9.12 0.00183473 700 16 2 24 [+] picture button
Fbxo39 ENSRNOT00000035574 F-box only protein 39. [Source:Uniprot/SWISSPROT;Acc:Q66H10]
16.1128 -21.16 0.00183961 700 12 5 24 [+] picture button
LOC684322 ENSRNOT00000020671 potassium channel modulatory factor 1 [Source:RefSeq_peptide;Acc:NP_064507]potassium channel modulatory factor 1 [Source:RefSeq_peptide;Acc:NP_064507] BY ORTHOLOGY TO:ENST00000319855
16.709 -23.39 0.00186255 700 16 10 26 [+] picture button
RGD1309783_predicted ENSRNOT00000006507 RIKEN cDNA 4930430A15 gene [Source:MarkerSymbol;Acc:MGI:1914825]RIKEN cDNA 4930430A15 gene [Source:MarkerSymbol;Acc:MGI:1914825] BY ORTHOLOGY TO:ENSMUST00000028577
15.5567 -11.16 0.00189356 700 9 2 11 [+] picture button
RGD1307749_predicted ENSRNOT00000013460 SEC6-like protein C14orf73. [Source:Uniprot/SWISSPROT;Acc:Q17RC7]SEC6-like protein C14orf73. [Source:Uniprot/SWISSPROT;Acc:Q17RC7] BY ORTHOLOGY TO:ENSGACT00000006187
15.646 -12.38 0.00192078 328 17 5 43 [+] picture button
Slc7a3 ENSRNOT00000005580 Cationic amino acid transporter 3 (CAT-3) (Solute carrier family 7 member 3) (Cationic amino acid transporter y+). [Source:Uniprot/SWISSPROT;Acc:O08812]
18.8747 -20.05 0.00194779 246 8 5 31 [+] picture button
RGD1308430_predicted ENSRNOT00000049927 NOT ANNOTATED
15.2638 -13.8 0.00197298 700 14 1 19 [+] picture button
Olr409_predicted ENSRNOT00000010341 olfactory receptor Olr409 [Source:RefSeq_peptide;Acc:NP_001000827]
16.9071 -16.6 0.00202951 700 13 2 18 [+] picture button
Rpl11 ENSRNOT00000039585 60S ribosomal protein L11. [Source:Uniprot/SWISSPROT;Acc:P62914]
17.0087 -14.84 0.00203808 700 16 1 18 [+] picture button
ENSRNOT00000033714 NOT ANNOTATED
15.3392 -12.9 0.00208013 700 9 1 14 [+] picture button
Il16 ENSRNOT00000016289 Interleukin-16 precursor (IL-16) (Lymphocyte chemoattractant factor) (LCF). [Source:Uniprot/SWISSPROT;Acc:O62666]Interleukin-16 precursor (IL-16) (Lymphocyte chemoattractant factor) (LCF). [Source:Uniprot/SWISSPROT;Acc:O62666] BY ORTHOLOGY TO:ENSPTRT00000013586
15.3686 -8.18 0.00208818 648 21 7 42 [+] picture button
Igsf9 ENSRNOT00000010930 immunoglobulin superfamily, member 9 [Source:MarkerSymbol;Acc:MGI:2135283]
15.2362 -20.28 0.00217538 197 13 5 44 [+] picture button
LOC682070 ENSRNOT00000058457 Novel protein. [Source:Uniprot/SPTREMBL;Acc:Q5JQZ5]Novel protein. [Source:Uniprot/SPTREMBL;Acc:Q5JQZ5] BY ORTHOLOGY TO:ENSMMUT00000002066
15.3057 -8.18 0.00220717 700 13 2 15 [+] picture button
Dnahc5 ENSRNOT00000017372 Dynein-like protein 5 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q63168]
15.4636 -9.89 0.00224126 162 9 4 33 [+] picture button
Olr1406_predicted ENSRNOT00000048759 olfactory receptor Olr1406 [Source:RefSeq_peptide;Acc:NP_001000786]
15.0698 -22.61 0.0023193 700 11 1 13 [+] picture button
Eme1_predicted ENSRNOT00000032693 Crossover junction endonuclease EME1 (EC 3.1.22.-) (hMMS4). [Source:Uniprot/SWISSPROT;Acc:Q96AY2]Crossover junction endonuclease EME1 (EC 3.1.22.-) (hMMS4). [Source:Uniprot/SWISSPROT;Acc:Q96AY2] BY ORTHOLOGY TO:ENSOANT00000004792
15.5752 -15.58 0.00233106 700 20 3 27 [+] picture button
Caprin1 ENSRNOT00000012428 cell cycle associated protein 1 [Source:MarkerSymbol;Acc:MGI:1858234]
15.0629 -15.63 0.0023478 700 16 1 24 [+] picture button
D030022P06Rik ENSRNOT00000054998 RIKEN cDNA D030022P06 gene [Source:MarkerSymbol;Acc:MGI:2444036]
15.3746 -15.02 0.0023478 700 10 1 12 [+] picture button

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Download table: GFF TXT
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