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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-34c

1031 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Svop ENSRNOT00000000874 Synaptic vesicle 2-related protein (SV2-related protein). [Source:Uniprot/SWISSPROT;Acc:Q9Z2I7]
16.565 -20.67 1.45397e-08 474 20 5 39 [+] picture button
Tmem22 ENSRNOT00000020610 Transmembrane protein 22. [Source:Uniprot/SWISSPROT;Acc:Q5M7A3]
18.4404 -17.82 4.8622e-08 188 9 7 29 [+] picture button
Ddx17 ENSRNOT00000018185 Ddx17 protein. [Source:Uniprot/SPTREMBL;Acc:Q568Z8]
17.5553 -23.28 7.47725e-08 579 14 6 27 [+] picture button
Taf4b ENSRNOT00000037955 TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:MarkerSymbol;Acc:MGI:2152345]
16.208 -23.65 8.12978e-08 700 18 4 31 [+] picture button
Mllt3 ENSRNOT00000015388 myeloid/lymphoid or mixed-lineage leukemia, translocated to, 3 [Source:RefSeq_peptide;Acc:NP_446170]
16.2394 -19.51 2.01104e-07 700 18 9 34 [+] picture button
RGD1559697_predicted ENSRNOT00000060704 Forkhead box protein P2 (CAG repeat protein 44) (Trinucleotide repeat- containing gene 10 protein). [Source:Uniprot/SWISSPROT;Acc:O15409]Forkhead box protein P2 (CAG repeat protein 44) (Trinucleotide repeat- containing gene 10 protein). [Source:Uniprot/SWISSPROT;Acc:O15409] BY ORTHOLOGY TO:ENSORLT00000013153
16.5592 -20.53 3.18198e-07 700 19 10 38 [+] picture button
RGD1308665 ENSRNOT00000046455 Similar to CGTHBA protein (-14 gene protein). [Source:Uniprot/SPTREMBL;Acc:Q499Q8]
16.983 -19 5.27927e-07 316 15 3 49 [+] picture button
Zfp281 ENSRNOT00000012085 zinc finger protein 281 [Source:RefSeq_peptide;Acc:NP_001012030]
17.3091 -14.97 5.34014e-07 331 14 12 44 [+] picture button
St6gal1 ENSRNOT00000002499 CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,6-sialyltransferase (EC 2.4.99.1) (Beta-galactoside alpha-2,6-sialyltransferase) (Alpha 2,6-ST) (Sialyltransferase 1) (ST6Gal I). [Source:Uniprot/SWISSPROT;Acc:P13721]
16.1778 -19.04 5.96401e-07 251 14 4 43 [+] picture button
Lipem1Mcwi ENSRNOT00000027910 Hormone-sensitive lipase (EC 3.1.1.79) (HSL). [Source:Uniprot/SWISSPROT;Acc:P15304]
17.5091 -18.87 6.9976e-07 304 16 6 63 [+] picture button
Daam1_predicted ENSRNOT00000005927 Disheveled-associated activator of morphogenesis 1. [Source:Uniprot/SWISSPROT;Acc:Q9Y4D1]Disheveled-associated activator of morphogenesis 1. [Source:Uniprot/SWISSPROT;Acc:Q9Y4D1] BY ORTHOLOGY TO:ENSXETT00000037098
17.6213 -20.39 1.40376e-06 700 19 4 27 [+] picture button
Ing5_predicted ENSRNOT00000025683 inhibitor of growth family, member 5 [Source:RefSeq_peptide;Acc:NP_001026483]inhibitor of growth family, member 5 [Source:RefSeq_peptide;Acc:NP_001026483] BY ORTHOLOGY TO:ENSGALT00000010213
16.1206 -17.49 1.64196e-06 1006 13 7 17 [+] picture button
Xpc_predicted ENSRNOT00000011490 DNA-repair protein complementing XP-C cells (Xeroderma pigmentosum group C-complementing protein) (p125). [Source:Uniprot/SWISSPROT;Acc:Q01831]DNA-repair protein complementing XP-C cells (Xeroderma pigmentosum group C-complementing protein) (p125). [Source:Uniprot/SWISSPROT;Acc:Q01831] BY ORTHOLOGY TO:ENSORLT00000003539
16.8037 -25.81 1.84253e-06 700 19 5 36 [+] picture button
Cops4 ENSRNOT00000003046 COP9 signalosome complex subunit 4 (Signalosome subunit 4) (SGN4) (JAB1-containing signalosome subunit 4). [Source:Uniprot/SWISSPROT;Acc:Q68FS2]
17.0834 -17.99 3.19106e-06 318 16 6 71 [+] picture button
Slc16a3 ENSRNOT00000054939 Monocarboxylate transporter 4 (MCT 4) (MCT 3) (Solute carrier family 16 member 3). [Source:Uniprot/SWISSPROT;Acc:O35910]
16.4331 -22.05 3.43125e-06 613 20 5 37 [+] picture button
RGD1561421_predicted ENSRNOT00000037450 Miro domain-containing protein C1orf89 homolog. [Source:Uniprot/SWISSPROT;Acc:Q66JN8]Miro domain-containing protein C1orf89 homolog. [Source:Uniprot/SWISSPROT;Acc:Q66JN8] BY ORTHOLOGY TO:ENSDART00000029553
17.4042 -22.68 4.00666e-06 700 14 2 26 [+] picture button
Alpl ENSRNOT00000019004 Alkaline phosphatase, tissue-nonspecific isozyme precursor (EC 3.1.3.1) (AP-TNAP) (TNSALP) (Alkaline phosphatase liver/bone/kidney isozyme). [Source:Uniprot/SWISSPROT;Acc:P08289]
16.5516 -17.73 4.1202e-06 679 19 6 26 [+] picture button
Glt8d1 ENSRNOT00000024624 Glycosyltransferase 8 domain-containing protein 1 (EC 2.4.1.-). [Source:Uniprot/SWISSPROT;Acc:Q6AYF6]
16.1281 -18.15 4.95356e-06 328 17 7 50 [+] picture button
Ccne2 ENSRNOT00000010696 cyclin E2 [Source:MarkerSymbol;Acc:MGI:1329034]
16.4916 -19.91 5.31193e-06 700 18 7 30 [+] picture button
RGD1305866_predicted ENSRNOT00000048446 family with sequence similarity 83, member H (FAM83H), mRNA [Source:RefSeq_dna;Acc:NM_198488]family with sequence similarity 83, member H (FAM83H), mRNA [Source:RefSeq_dna;Acc:NM_198488] BY ORTHOLOGY TO:ENSOANT00000000665
17.0339 -23.44 5.38184e-06 700 18 4 27 [+] picture button
Gm98 ENSRNOT00000039133 gene model 98, (NCBI) [Source:MarkerSymbol;Acc:MGI:2684944]
16.6209 -21.46 5.7878e-06 700 19 8 27 [+] picture button
Coq4 ENSRNOT00000038602 coenzyme Q4 homolog [Source:RefSeq_peptide;Acc:NP_001026832]
16.6874 -18.67 6.45334e-06 417 15 3 27 [+] picture button
RGD1310727_predicted ENSRNOT00000032543 Uncharacterized protein C15orf17. [Source:Uniprot/SWISSPROT;Acc:Q5XKK7]Uncharacterized protein C15orf17. [Source:Uniprot/SWISSPROT;Acc:Q5XKK7] BY ORTHOLOGY TO:SINFRUT00000153388
16.9307 -22.53 6.50497e-06 700 16 3 22 [+] picture button
Met ENSRNOT00000009662 Hepatocyte growth factor receptor precursor (EC 2.7.10.1) (HGF receptor) (Scatter factor receptor) (SF receptor) (HGF/SF receptor) (Met proto-oncogene tyrosine kinase) (c-Met). [Source:Uniprot/SWISSPROT;Acc:P97523]
16.0467 -22.64 6.53953e-06 700 21 6 41 [+] picture button
RGD1561496_predicted ENSRNOT00000017858 mannosyl-oligosaccharide alpha-1,2-mannosidase, putativemannosyl-oligosaccharide alpha-1,2-mannosidase, putative BY ORTHOLOGY TO:AAEL002645-RA
16.5177 -18.58 6.58368e-06 700 15 3 27 [+] picture button
Nid2 ENSRNOT00000000383 Nid2 protein. [Source:Uniprot/SPTREMBL;Acc:Q5M812]
16.0015 -21.56 7.63578e-06 700 14 4 18 [+] picture button
Pgm1 ENSRNOT00000013785 Phosphoglucomutase-1 (EC 5.4.2.2) (Glucose phosphomutase 1) (PGM 1). [Source:Uniprot/SWISSPROT;Acc:P38652]
16.5285 -21.09 7.63782e-06 531 17 7 32 [+] picture button
Mrps7 ENSRNOT00000005089 28S ribosomal protein S7, mitochondrial precursor (S7mt) (MRP-S7). [Source:Uniprot/SWISSPROT;Acc:Q5I0K8]
16.5172 -15.71 7.76018e-06 260 13 3 44 [+] picture button
Aqp8 ENSRNOT00000019939 Aquaporin-8 (AQP-8). [Source:Uniprot/SWISSPROT;Acc:P56405]
16.5177 -21.36 7.89082e-06 700 17 4 38 [+] picture button
Frmd4a_predicted ENSRNOT00000045765 PREDICTED: Gallus gallus hypothetical LOC419035 (LOC419035), mRNA. [Source:RefSeq_dna;Acc:XR_027002]PREDICTED: Gallus gallus hypothetical LOC419035 (LOC419035), mRNA. [Source:RefSeq_dna;Acc:XR_027002] BY ORTHOLOGY TO:ENSGALT00000010765
16.0015 -18.11 8.81807e-06 700 17 7 27 [+] picture button
Tmcc3_predicted ENSRNOT00000010316 Transmembrane and coiled-coil domains protein 3. [Source:Uniprot/SWISSPROT;Acc:Q9ULS5]Transmembrane and coiled-coil domains protein 3. [Source:Uniprot/SWISSPROT;Acc:Q9ULS5] BY ORTHOLOGY TO:ENST00000261226
16.6209 -20.13 9.08734e-06 700 15 4 24 [+] picture button
ENSRNOT00000056421 hypothetical protein LOC567592 [Source:RefSeq_peptide;Acc:NP_001071083]hypothetical protein LOC567592 [Source:RefSeq_peptide;Acc:NP_001071083] BY ORTHOLOGY TO:ENSDART00000083558
16.7242 -19.75 9.86836e-06 700 14 5 24 [+] picture button
Dll1 ENSRNOT00000019934 Delta-like protein 1 precursor (Drosophila Delta homolog 1) (Delta1). [Source:Uniprot/SWISSPROT;Acc:P97677]
16.4265 -27.29 1.02213e-05 700 18 8 31 [+] picture button
Snx15 ENSRNOT00000028511 Sorting nexin-15. [Source:Uniprot/SWISSPROT;Acc:Q4V896]
17.5236 -23.23 1.192e-05 435 20 7 39 [+] picture button
Stx18 ENSRNOT00000008410 Syntaxin-18. [Source:Uniprot/SWISSPROT;Acc:Q68FW4]
17.8477 -28.92 1.20569e-05 476 14 3 27 [+] picture button
Sars1 ENSRNOT00000027449 Seryl-tRNA synthetase, cytoplasmic (EC 6.1.1.11) (Seryl-tRNA(Ser/Sec) synthetase) (Serine--tRNA ligase) (SerRS). [Source:Uniprot/SWISSPROT;Acc:Q6P799]
16.9697 -15.09 1.23989e-05 262 17 5 56 [+] picture button
RGD1564978_predicted ENSRNOT00000034704 expressed sequence AI595366 [Source:MarkerSymbol;Acc:MGI:2145269]expressed sequence AI595366 [Source:MarkerSymbol;Acc:MGI:2145269] BY ORTHOLOGY TO:ENSMUST00000022064
17.3436 -22.38 1.25078e-05 700 19 3 22 [+] picture button
Mapkap1 ENSRNOT00000023889 mitogen-activated protein kinase associated protein 1 [Source:RefSeq_peptide;Acc:NP_001011964]
16.5159 -21.1 1.30767e-05 360 16 4 40 [+] picture button
Khk ENSRNOT00000010867 Ketohexokinase (EC 2.7.1.3) (Hepatic fructokinase). [Source:Uniprot/SWISSPROT;Acc:Q02974]
18.6667 -24.85 1.31489e-05 186 10 4 34 [+] picture button
Serping1 ENSRNOT00000009817 Plasma protease C1 inhibitor precursor (C1 Inh) (C1Inh) (C1 esterase inhibitor) (C1-inhibiting factor). [Source:Uniprot/SWISSPROT;Acc:Q6P734]
18.3273 -21.92 1.46768e-05 222 10 5 30 [+] picture button
Slc37a3_predicted ENSRNOT00000011915 solute carrier family 37 (glycerol-3-phosphate transporter), member 3 isoform 2 [Source:RefSeq_peptide;Acc:NP_115671]solute carrier family 37 (glycerol-3-phosphate transporter), member 3 isoform 2 [Source:RefSeq_peptide;Acc:NP_115671] BY ORTHOLOGY TO:SINFRUT00000150830
16.9307 -18.38 1.51999e-05 700 23 3 30 [+] picture button
Rab3c ENSRNOT00000015871 Ras-related protein Rab-3C. [Source:Uniprot/SWISSPROT;Acc:P62824]
17.196 -19.67 1.68677e-05 228 13 5 45 [+] picture button
Nme6 ENSRNOT00000028125 Nucleoside diphosphate kinase 6 (EC 2.7.4.6) (NDK 6) (NDP kinase 6) (nm23-R6) (Fragment). [Source:Uniprot/SWISSPROT;Acc:O88426]
17.3833 -20.86 1.77377e-05 306 18 7 51 [+] picture button
Suox ENSRNOT00000008018 Sulfite oxidase, mitochondrial precursor (EC 1.8.3.1). [Source:Uniprot/SWISSPROT;Acc:Q07116]
16.2911 -16.08 1.93972e-05 495 17 4 30 [+] picture button
Bcl2 ENSRNOT00000003768 Apoptosis regulator Bcl-2. [Source:Uniprot/SWISSPROT;Acc:P49950]
17.8748 -23.94 2.05551e-05 232 8 5 15 [+] picture button
O08564-2 ENSRNOT00000013314 LPP1_RAT Isoform 2 of O08564 - Rattus norvegicus (Rat) [Source:Uniprot/Varsplic;Acc:O08564-2]
16.0205 -20.42 2.18499e-05 700 12 8 17 [+] picture button
Gmpr2 ENSRNOT00000027429 guanosine monophosphate reductase 2 [Source:RefSeq_peptide;Acc:NP_001013054]
16.208 -16.58 2.19352e-05 700 13 3 20 [+] picture button
Hcn3 ENSRNOT00000027785 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3. [Source:Uniprot/SWISSPROT;Acc:Q9JKA8]
17.3436 -24 2.27293e-05 700 19 4 26 [+] picture button
Vgcnl1 ENSRNOT00000006624 voltage gated channel like 1 [Source:RefSeq_peptide;Acc:NP_705894]
16.8274 -22.6 2.41449e-05 700 19 4 29 [+] picture button
Chek2 ENSRNOT00000056800 protein kinase Chk2 [Source:RefSeq_peptide;Acc:NP_446129]
16.7105 -20.16 2.50148e-05 700 18 3 29 [+] picture button

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Download table: GFF TXT
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