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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-33

977 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Hadhb ENSRNOT00000014637 Trifunctional enzyme subunit beta, mitochondrial precursor (TP-beta) [Includes: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) (Acetyl-CoA acyltransferase) (Beta-ketothiolase)]. [Source:Uniprot/SWISSPROT;Acc:Q60587]
20.1818 -25.19 9.00004e-10 479 18 7 34 [+] picture button
Crot ENSRNOT00000010060 Peroxisomal carnitine O-octanoyltransferase (EC 2.3.1.137) (COT). [Source:Uniprot/SWISSPROT;Acc:P11466]
18.5155 -20.79 3.08361e-08 794 17 4 24 [+] picture button
Abca1 ENSRNOT00000024564 ATP-binding cassette, sub-family A (ABC1), member 1 [Source:RefSeq_peptide;Acc:NP_835196]
18.7586 -24.3 4.58611e-08 700 17 9 28 [+] picture button
Has3 ENSRNOT00000027422 hyaluronan synthase 3 [Source:RefSeq_peptide;Acc:NP_758822]
16.5084 -14.44 4.0461e-07 700 15 6 33 [+] picture button
Kcna1 ENSRNOT00000026731 Potassium voltage-gated channel subfamily A member 1 (Voltage-gated potassium channel subunit Kv1.1) (IA) (RBKI) (RCK1). [Source:Uniprot/SWISSPROT;Acc:P10499]
17.3918 -17.21 4.77981e-07 700 9 8 18 [+] picture button
ENSRNOT00000046689 CDNA FLJ44741 fis, clone BRACE3027931. [Source:Uniprot/SPTREMBL;Acc:Q6ZTE4]CDNA FLJ44741 fis, clone BRACE3027931. [Source:Uniprot/SPTREMBL;Acc:Q6ZTE4] BY ORTHOLOGY TO:ENST00000378337
16.4659 -18.14 1e-06 700 30 1 3 [+] picture button
RGD1305062 ENSRNOT00000050902 RGD1305062 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5BJP8]
17.2996 -18.95 1.62734e-06 700 18 3 27 [+] picture button
RGD1559927_predicted ENSRNOT00000028007 H6 homeo box 3 [Source:MarkerSymbol;Acc:MGI:107160]H6 homeo box 3 [Source:MarkerSymbol;Acc:MGI:107160] BY ORTHOLOGY TO:ENSMUST00000046093
19.4323 -18.94 1.65258e-06 291 16 8 60 [+] picture button
Ppara ENSRNOT00000030082 Peroxisome proliferator-activated receptor alpha (PPAR-alpha). [Source:Uniprot/SWISSPROT;Acc:P37230]
16.6889 -12.78 2.65691e-06 237 13 6 49 [+] picture button
RGD1561955_predicted ENSRNOT00000044063 Diacylglycerol kinase eta (EC 2.7.1.107) (Diglyceride kinase eta) (DGK-eta) (DAG kinase eta). [Source:Uniprot/SWISSPROT;Acc:Q86XP1]Diacylglycerol kinase eta (EC 2.7.1.107) (Diglyceride kinase eta) (DGK-eta) (DAG kinase eta). [Source:Uniprot/SWISSPROT;Acc:Q86XP1] BY ORTHOLOGY TO:ENSGALT00000027409
16.0683 -17.25 3.57191e-06 700 14 6 24 [+] picture button
Hagh ENSRNOT00000020192 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) (Glyoxalase II) (Glx II) (Round spermatid protein RSP29). [Source:Uniprot/SWISSPROT;Acc:O35952]
15.6602 -10.08 3.95152e-06 149 8 5 24 [+] picture button
Zfp281 ENSRNOT00000012085 zinc finger protein 281 [Source:RefSeq_peptide;Acc:NP_001012030]
20.0039 -19.97 4.31301e-06 331 14 12 44 [+] picture button
Cdk6 ENSRNOT00000012597 Cyclin-dependent kinase 6 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q99MD0]
16.3612 -11.78 4.5056e-06 430 20 6 38 [+] picture button
ENSRNOT00000031198 D2089.2 [Source:RefSeq_peptide;Acc:NP_496302]D2089.2 [Source:RefSeq_peptide;Acc:NP_496302] BY ORTHOLOGY TO:D2089.2
17.4891 -19.65 4.7937e-06 104 6 8 22 [+] picture button
RGD1306991 ENSRNOT00000007274 similar to Protein C20orf103 precursor (RGD1306991), mRNA [Source:RefSeq_dna;Acc:NM_001014183]
15.5655 -16.14 5.15196e-06 697 15 6 24 [+] picture button
Alg8 ENSRNOT00000055359 asparagine-linked glycosylation 8 homolog (yeast, alpha-1,3-glucosyltransferase) [Source:RefSeq_peptide;Acc:NP_001029299]
15.8169 -13.87 5.84931e-06 402 15 5 29 [+] picture button
Pja2 ENSRNOT00000021258 E3 ubiquitin-protein ligase Praja2 (EC 6.3.2.-) (Praja-2). [Source:Uniprot/SWISSPROT;Acc:Q63364]
16.2773 -13.97 6.35745e-06 398 9 3 20 [+] picture button
Nup35 ENSRNOT00000012628 Nucleoporin NUP53 (Nuclear pore complex protein Nup53) (Nucleoporin Nup35) (35 kDa nucleoporin). [Source:Uniprot/SWISSPROT;Acc:Q68FY1]
16.823 -17.35 7.18441e-06 507 19 9 43 [+] picture button
Sorcs3_predicted ENSRNOT00000046397 sortilin-related VPS10 domain containing receptor 3 [Source:MarkerSymbol;Acc:MGI:1913923]sortilin-related VPS10 domain containing receptor 3 [Source:MarkerSymbol;Acc:MGI:1913923] BY ORTHOLOGY TO:ENSMUST00000078880
16.2299 -13.99 8.89241e-06 700 18 6 28 [+] picture button
Hipk2 ENSRNOT00000010384 homeodomain interacting protein kinase 2 [Source:MarkerSymbol;Acc:MGI:1314872]
17.6034 -13.53 1.03341e-05 234 16 5 46 [+] picture button
Angpt2 ENSRNOT00000022774 Angiopoietin-2 (ANG-2) (Fragment). [Source:Uniprot/SWISSPROT;Acc:O35462]
17.6034 -14.11 1.07294e-05 152 7 3 24 [+] picture button
RGD1306349_predicted ENSRNOT00000049803 Formin (Limb deformity protein). [Source:Uniprot/SWISSPROT;Acc:Q05858]Formin (Limb deformity protein). [Source:Uniprot/SWISSPROT;Acc:Q05858] BY ORTHOLOGY TO:ENSGALT00000037920
15.9665 -12.38 1.15604e-05 700 12 3 14 [+] picture button
Sat ENSRNOT00000043241 spermidine/spermine N1-acetyl transferase [Source:RefSeq_peptide;Acc:NP_001007668]
15.6322 -15.15 1.24116e-05 700 19 9 29 [+] picture button
Cntn5 ENSRNOT00000061745 contactin 5 (Cntn5), mRNA [Source:RefSeq_dna;Acc:NM_053746]
17.2016 -16.56 1.33632e-05 700 15 1 22 [+] picture button
Arid5b_predicted ENSRNOT00000000787 AT-rich interactive domain-containing protein 5B (ARID domain- containing protein 5B) (Mrf1-like) (Modulator recognition factor 2) (MRF-2). [Source:Uniprot/SWISSPROT;Acc:Q14865]AT-rich interactive domain-containing protein 5B (ARID domain- containing protein 5B) (Mrf1-like) (Modulator recognition factor 2) (MRF-2). [Source:Uniprot/SWISSPROT;Acc:Q14865] BY ORTHOLOGY TO:ENSMODT00000021713
16.1164 -17.6 1.35962e-05 700 19 5 31 [+] picture button
SCNAA_RAT ENSRNOT00000046864 Sodium channel protein type 10 subunit alpha (Sodium channel protein type X subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.8) (Peripheral nerve sodium channel 3) (Sensory neuron sodium channel). [Source:Uniprot/SWISSPROT;Acc:Q62968]
15.5704 -10.82 1.60544e-05 435 20 5 44 [+] picture button
Q9JHC2_RAT ENSRNOT00000022679 MMP-2 (Matrix metalloproteinase 2) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9JHC2]
15.6322 -12.79 1.84241e-05 700 16 5 25 [+] picture button
Bmp3 ENSRNOT00000038872 Bone morphogenetic protein 3 precursor (BMP-3). [Source:Uniprot/SWISSPROT;Acc:P49002]
17.7177 -16.19 1.87412e-05 147 8 6 30 [+] picture button
RGD1566094_predicted ENSRNOT00000025391 BTB/POZ domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q9BX70]BTB/POZ domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q9BX70] BY ORTHOLOGY TO:ENSMODT00000005716
18.1333 -23.58 2.00996e-05 700 21 6 33 [+] picture button
Prickle2_predicted ENSRNOT00000016628 prickle-like 2 (Drosophila) [Source:MarkerSymbol;Acc:MGI:1925144]prickle-like 2 (Drosophila) [Source:MarkerSymbol;Acc:MGI:1925144] BY ORTHOLOGY TO:ENSMUST00000032093
17.3914 -15.65 2.34265e-05 560 15 5 27 [+] picture button
Fabp2 ENSRNOT00000029871 Fatty acid-binding protein, intestinal (I-FABP) (FABPI). [Source:Uniprot/SWISSPROT;Acc:P02693]
17.0319 -11.92 2.75175e-05 153 9 3 31 [+] picture button
Tbc1d12 ENSRNOT00000018668 TBC1D12: TBC1 domain family, member 12 [Source:MarkerSymbol;Acc:MGI:2384803]
15.7552 -14.7 2.98179e-05 700 16 10 20 [+] picture button
Smu1 ENSRNOT00000010464 Smu-1 suppressor of mec-8 and unc-52 protein homolog (Brain-enriched WD repeat protein). [Source:Uniprot/SWISSPROT;Acc:Q99M63]
16.4603 -16.75 3.01535e-05 161 8 4 28 [+] picture button
Gc ENSRNOT00000004174 Vitamin D-binding protein precursor (DBP) (Group-specific component) (Gc-globulin) (VDB). [Source:Uniprot/SWISSPROT;Acc:P04276]
17.3748 -17.2 3.81426e-05 183 7 3 30 [+] picture button
Wdr19_predicted ENSRNOT00000003991 WD repeat protein 19. [Source:Uniprot/SWISSPROT;Acc:Q8NEZ3]WD repeat protein 19. [Source:Uniprot/SWISSPROT;Acc:Q8NEZ3] BY ORTHOLOGY TO:ENST00000288634
15.8888 -16.63 3.83403e-05 300 16 5 62 [+] picture button
Pcnt1 ENSRNOT00000005035 pericentrin 1 [Source:RefSeq_peptide;Acc:NP_001020572]
16.1174 -18.4 4.38582e-05 106 4 5 18 [+] picture button
Opn1sw ENSRNOT00000009278 Blue-sensitive opsin (BOP) (Blue cone photoreceptor pigment) (Short wavelength-sensitive cone opsin) (S opsin). [Source:Uniprot/SWISSPROT;Acc:Q63652]
16.0074 -9.63 4.4188e-05 559 15 5 26 [+] picture button
Cck ENSRNOT00000026159 Cholecystokinins precursor (CCK) [Contains: Cholecystokinin 39 (CCK39); Cholecystokinin 33 (CCK33); Cholecystokinin 22 (CCK22); Cholecystokinin 12 (CCK12); Cholecystokinin 8 (CCK8)]. [Source:Uniprot/SWISSPROT;Acc:P01355]
17.1462 -12.63 4.45601e-05 244 14 8 47 [+] picture button
Lbxcor1_predicted ENSRNOT00000018756 Ladybird homeobox corepressor 1. [Source:Uniprot/SWISSPROT;Acc:P84551]
16.2272 -12.89 4.48414e-05 702 17 8 39 [+] picture button
RGD1562891_predicted ENSRNOT00000007112 Rap guanine nucleotide exchange factor 5 (Guanine nucleotide exchange factor for Rap1) (Related to Epac) (Repac) (M-Ras-regulated Rap GEF) (MR-GEF). [Source:Uniprot/SWISSPROT;Acc:Q92565]Rap guanine nucleotide exchange factor 5 (Guanine nucleotide exchange factor for Rap1) (Related to Epac) (Repac) (M-Ras-regulated Rap GEF) (MR-GEF). [Source:Uniprot/SWISSPROT;Acc:Q92565] BY ORTHOLOGY TO:ENSXETT00000016124
16.1532 -18.34 5.50808e-05 700 19 4 23 [+] picture button
RGD1306881_predicted ENSRNOT00000045010 paraneoplastic antigen [Source:RefSeq_peptide;Acc:NP_055418]paraneoplastic antigen [Source:RefSeq_peptide;Acc:NP_055418] BY ORTHOLOGY TO:ENSOANT00000006933
15.9448 -12.39 5.98734e-05 700 16 4 26 [+] picture button
RGD1561884_predicted ENSRNOT00000021425 spinster homolog 3 [Source:RefSeq_peptide;Acc:NP_872344]spinster homolog 3 [Source:RefSeq_peptide;Acc:NP_872344] BY ORTHOLOGY TO:ENST00000355530
16.0031 -13.08 6.08408e-05 255 14 4 47 [+] picture button
RGD1305593_predicted ENSRNOT00000001716 Uncharacterized protein C7orf48. [Source:Uniprot/SWISSPROT;Acc:Q9BT73]Uncharacterized protein C7orf48. [Source:Uniprot/SWISSPROT;Acc:Q9BT73] BY ORTHOLOGY TO:SINFRUT00000142387
15.6483 -15.21 6.10029e-05 302 17 4 78 [+] picture button
Tnfaip2 ENSRNOT00000042973 tumor necrosis factor, alpha-induced protein 2 [Source:MarkerSymbol;Acc:MGI:104960]
16.7738 -18.68 6.52639e-05 638 17 2 28 [+] picture button
Slc39a8 ENSRNOT00000033413 solute carrier family 39 (metal ion transporter), member 8 [Source:RefSeq_peptide;Acc:NP_001011952]
16.0624 -16.2 6.98027e-05 1624 14 5 14 [+] picture button
Trp53bp2_predicted ENSRNOT00000004330 Apoptosis-stimulating of p53 protein 2 (Tumor suppressor p53-binding protein 2) (p53-binding protein 2) (p53BP2) (53BP2) (Bcl2-binding protein) (Bbp) (Renal carcinoma antigen NY-REN-51). [Source:Uniprot/SWISSPROT;Acc:Q13625]Apoptosis-stimulating of p53 protein 2 (Tumor suppressor p53-binding protein 2) (p53-binding protein 2) (p53BP2) (53BP2) (Bcl2-binding protein) (Bbp) (Renal carcinoma antigen NY-REN-51). [Source:Uniprot/SWISSPROT;Acc:Q13625] BY ORTHOLOGY TO:ENSMMUT00000015577
15.8406 -18.29 7.12542e-05 700 20 5 29 [+] picture button
LOC684484 ENSRNOT00000019916 Golgi-associated plant pathogenesis-related protein 1 (Golgi- associated PR-1 protein) (GAPR-1) (Glioma pathogenesis-related protein 2) (GliPR 2). [Source:Uniprot/SWISSPROT;Acc:Q9H4G4]Golgi-associated plant pathogenesis-related protein 1 (Golgi- associated PR-1 protein) (GAPR-1) (Glioma pathogenesis-related protein 2) (GliPR 2). [Source:Uniprot/SWISSPROT;Acc:Q9H4G4] BY ORTHOLOGY TO:ENSMODT00000003226
16.2777 -14.48 7.14042e-05 700 15 2 26 [+] picture button
Acsbg1 ENSRNOT00000016104 acyl-CoA synthetase bubblegum family member 1 [Source:RefSeq_peptide;Acc:NP_599216]
15.5931 -14.77 7.34809e-05 488 19 4 52 [+] picture button
LOC304558 ENSRNOT00000046920 CG6915-PA [Source:RefSeq_peptide;Acc:NP_648228]CG6915-PA [Source:RefSeq_peptide;Acc:NP_648228] BY ORTHOLOGY TO:CG6915-RA
16.6331 -16.23 7.38483e-05 700 16 5 28 [+] picture button
Chfr ENSRNOT00000056639 checkpoint with forkhead and ring finger domains [Source:RefSeq_peptide;Acc:NP_001009258]
15.7286 -18.06 7.42906e-05 1115 18 3 22 [+] picture button

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Download table: GFF TXT
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