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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-30e*

784 hits found.


Page 1 of 16
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Gne ENSRNOT00000060219 Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase (UDP-GlcNAc-2-epimerase/ManAc kinase) [Includes: UDP-N- acetylglucosamine 2-epimerase (EC 5.1.3.14) (Uridine diphosphate-N- acetylglucosamine-2-epimerase) (UDP-GlcNAc-2-epimerase) [Source:Uniprot/SWISSPROT;Acc:O35826]
16.0977 -12.3 1e-06 308 17 4 53 [+] picture button
Gne ENSRNOT00000019532 Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase (UDP-GlcNAc-2-epimerase/ManAc kinase) [Includes: UDP-N- acetylglucosamine 2-epimerase (EC 5.1.3.14) (Uridine diphosphate-N- acetylglucosamine-2-epimerase) (UDP-GlcNAc-2-epimerase) [Source:Uniprot/SWISSPROT;Acc:O35826]
16.1156 -12.3 1e-06 305 15 1 40 [+] picture button
RGD1562964_predicted ENSRNOT00000061923 similar to glyceraldehyde-phosphate-dehydrogenase (predicted) (RGD1562964_predicted), mRNA [Source:RefSeq_dna;Acc:XR_008058]
16.2827 -11.65 1e-06 700 15 1 12 [+] picture button
Tnfaip8l2 ENSRNOT00000028642 Tumor necrosis factor, alpha-induced protein 8-like protein 2. [Source:Uniprot/SWISSPROT;Acc:Q6AYJ8]
17.7214 -19.44 1e-06 475 17 7 27 [+] picture button
RGD1562964_predicted ENSRNOT00000061924 similar to glyceraldehyde-phosphate-dehydrogenase (predicted) (RGD1562964_predicted), mRNA [Source:RefSeq_dna;Acc:XR_008058]
16.2827 -11.65 1e-06 700 15 1 11 [+] picture button
Nol4_predicted ENSRNOT00000041125 Nucleolar protein 4 (Nucleolar-localized protein). [Source:Uniprot/SWISSPROT;Acc:O94818]Nucleolar protein 4 (Nucleolar-localized protein). [Source:Uniprot/SWISSPROT;Acc:O94818] BY ORTHOLOGY TO:ENSMODT00000013733
18.3436 -14.34 8.50482e-06 396 19 7 45 [+] picture button
LOC499871 ENSRNOT00000016854 similar to Zinc finger, FYVE domain containing 19 (LOC499871), mRNA [Source:RefSeq_dna;Acc:NM_001034948]
16.3901 -17.24 2.68214e-05 316 15 4 38 [+] picture button
LOC500532 ENSRNOT00000056882 hypothetical protein LOC616005 [Source:RefSeq_peptide;Acc:NP_001070409]hypothetical protein LOC616005 [Source:RefSeq_peptide;Acc:NP_001070409] BY ORTHOLOGY TO:ENSBTAT00000016395
16.4901 -18.26 4.79969e-05 700 22 6 30 [+] picture button
ENSRNOT00000043571 PREDICTED: Pan troglodytes similar to myosin:SUBUNIT=regulatory light chain (LOC471984), mRNA. [Source:RefSeq_dna;Acc:XR_024257]PREDICTED: Pan troglodytes similar to myosin:SUBUNIT=regulatory light chain (LOC471984), mRNA. [Source:RefSeq_dna;Acc:XR_024257] BY ORTHOLOGY TO:ENSPTRT00000018070
16.9899 -15.04 5.93851e-05 700 12 2 16 [+] picture button
Gpr98 ENSRNOT00000021912 G protein-coupled receptor 98 [Source:MarkerSymbol;Acc:MGI:1274784]
16.1957 -13.11 6.30091e-05 700 23 3 43 [+] picture button
RGD1305283_predicted ENSRNOT00000013467 hypothetical protein LOC406630 [Source:RefSeq_peptide;Acc:NP_998491]hypothetical protein LOC406630 [Source:RefSeq_peptide;Acc:NP_998491] BY ORTHOLOGY TO:ENSDART00000063129
16.6137 -9.16 7.55079e-05 700 17 2 24 [+] picture button
Q38PG1_RAT ENSRNOT00000047538 AHNAK 1 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q38PG1]
17.1124 -17.47 9.27179e-05 700 13 1 11 [+] picture button
Art1_predicted ENSRNOT00000027427 ADP-ribosyltransferase 1 [Source:MarkerSymbol;Acc:MGI:107511]ADP-ribosyltransferase 1 [Source:MarkerSymbol;Acc:MGI:107511] BY ORTHOLOGY TO:ENSMUST00000033300
16.7996 -19.03 9.45274e-05 351 14 5 37 [+] picture button
Tcf2 ENSRNOT00000003507 transcription factor 2 [Source:MarkerSymbol;Acc:MGI:98505]
16.2827 -11.26 9.52519e-05 700 19 7 30 [+] picture button
LOC680865 ENSRNOT00000020162 testis expressed gene 13 [Source:MarkerSymbol;Acc:MGI:1890544]testis expressed gene 13 [Source:MarkerSymbol;Acc:MGI:1890544] BY ORTHOLOGY TO:ENSMUST00000044179
16.179 -18.11 0.000112249 700 17 2 16 [+] picture button
Rpl41 ENSRNOT00000010400 60S ribosomal protein L41. [Source:Uniprot/SWISSPROT;Acc:P62948]
16.5914 -17.24 0.000113851 700 15 1 16 [+] picture button
Pitx2 ENSRNOT00000044232 Pituitary homeobox 2 (rPtx2). [Source:Uniprot/SWISSPROT;Acc:Q9R0W1]
17.2393 -24.28 0.000116613 691 15 1 16 [+] picture button
RGD1306094 ENSRNOT00000031756 LRRGT00044. [Source:Uniprot/SPTREMBL;Acc:Q6TXF5]
18.1685 -16.13 0.00011832 700 17 3 39 [+] picture button
Pitx2 ENSRNOT00000051009 Pituitary homeobox 2 (rPtx2). [Source:Uniprot/SWISSPROT;Acc:Q9R0W1]
17.2264 -24.28 0.000120622 696 15 1 16 [+] picture button
Prp15 ENSRNOT00000007119 proline-rich protein 15 [Source:RefSeq_peptide;Acc:NP_036764]
16.1454 -12.6 0.000123445 535 13 1 19 [+] picture button
Tmem19 ENSRNOT00000005310 Transmembrane protein 19. [Source:Uniprot/SWISSPROT;Acc:Q6P726]
16.0986 -11.01 0.000123851 522 16 2 26 [+] picture button
Pitx2 ENSRNOT00000014368 Pituitary homeobox 2 (rPtx2). [Source:Uniprot/SWISSPROT;Acc:Q9R0W1]
17.2161 -24.28 0.0001239 700 19 7 30 [+] picture button
RGD1560071_predicted ENSRNOT00000061398 RIKEN cDNA 2310051M13 gene [Source:MarkerSymbol;Acc:MGI:1917452]RIKEN cDNA 2310051M13 gene [Source:MarkerSymbol;Acc:MGI:1917452] BY ORTHOLOGY TO:ENSMUST00000043754
16.1459 -7.8 0.00014934 244 12 2 28 [+] picture button
Mrlcb ENSRNOT00000021274 Myosin regulatory light chain 2-B, smooth muscle isoform (Myosin RLC- B). [Source:Uniprot/SWISSPROT;Acc:P18666]
17.0266 -15.04 0.000154883 581 14 3 22 [+] picture button
Lrriq1 ENSRNOT00000031320 leucine-rich repeats and IQ motif containing 1 [Source:MarkerSymbol;Acc:MGI:1922228]
16.6976 -12.82 0.000156683 700 14 3 23 [+] picture button
RGD1306451_predicted ENSRNOT00000037587 Methyltransferase-like protein 4 (EC 2.1.1.-). [Source:Uniprot/SWISSPROT;Acc:Q8N3J2]Methyltransferase-like protein 4 (EC 2.1.1.-). [Source:Uniprot/SWISSPROT;Acc:Q8N3J2] BY ORTHOLOGY TO:ENSOANT00000017182
16.6137 -15.54 0.000280416 700 15 3 32 [+] picture button
Tdrd3 ENSRNOT00000012440 tudor domain containing 3 [Source:RefSeq_peptide;Acc:NP_001012043]
19.1021 -21.26 0.000469032 257 11 7 34 [+] picture button
LOC682185 ENSRNOT00000034106 Protein phosphatase 1 regulatory subunit 3D (Protein phosphatase 1, regulatory subunit 6) (Protein phosphatase 1-binding subunit R6). [Source:Uniprot/SWISSPROT;Acc:O95685]Protein phosphatase 1 regulatory subunit 3D (Protein phosphatase 1, regulatory subunit 6) (Protein phosphatase 1-binding subunit R6). [Source:Uniprot/SWISSPROT;Acc:O95685] BY ORTHOLOGY TO:ENSMMUT00000027350
16.905 -12.54 0.000490891 700 23 3 31 [+] picture button
RGD1310414 ENSRNOT00000058719 Uncharacterized protein C8orf41 homolog. [Source:Uniprot/SWISSPROT;Acc:Q66H56]
16.9418 -17.86 0.000507268 53 3 2 4 [+] picture button
RGD1564316_predicted ENSRNOT00000017339 CG1841-PA, isoform A [Source:RefSeq_peptide;Acc:NP_572743]CG1841-PA, isoform A [Source:RefSeq_peptide;Acc:NP_572743] BY ORTHOLOGY TO:CG1841-RB
17.1124 -18.22 0.000548584 700 14 2 15 [+] picture button
Ros1 ENSRNOT00000000459 Proto-oncogene tyrosine-protein kinase ROS precursor (EC 2.7.10.1) (c- ros-1). [Source:Uniprot/SWISSPROT;Acc:Q63132]
16.2836 -12.34 0.000603914 484 19 2 29 [+] picture button
Prpf31_predicted ENSRNOT00000018683 U4/U6 small nuclear ribonucleoprotein Prp31 (Pre-mRNA-processing factor 31) (U4/U6 snRNP 61 kDa protein) (hPrp31) (Protein 61K) (Serologically defined breast cancer antigen NY-BR-99). [Source:Uniprot/SWISSPROT;Acc:Q8WWY3]U4/U6 small nuclear ribonucleoprotein Prp31 (Pre-mRNA-processing factor 31) (U4/U6 snRNP 61 kDa protein) (hPrp31) (Protein 61K) (Serologically defined breast cancer antigen NY-BR-99). [Source:Uniprot/SWISSPROT;Acc:Q8WWY3] BY ORTHOLOGY TO:ENSMODT00000005152
17.6072 -24.38 0.000686178 700 14 2 23 [+] picture button
Lect1 ENSRNOT00000017400 Chondromodulin-1 precursor (Chondromodulin-I) (ChM-I) (Leukocyte cell- derived chemotaxin 1) [Contains: Chondrosurfactant protein (CH-SP)]. [Source:Uniprot/SWISSPROT;Acc:O70367]
19.3295 -23.88 0.000688799 276 12 7 29 [+] picture button
Raly ENSRNOT00000030431 hnRNP-associated with lethal yellow [Source:RefSeq_peptide;Acc:NP_001011958]
17.2829 -17.4 0.000724382 700 13 4 45 [+] picture button
Egfr ENSRNOT00000006087 epidermal growth factor receptor [Source:RefSeq_peptide;Acc:NP_113695]
20.8846 -26.67 0.000767101 377 16 2 28 [+] picture button
RGD1359108 ENSRNOT00000013181 Uncharacterized protein C9orf72 homolog. [Source:Uniprot/SWISSPROT;Acc:Q66HC3]
16.5424 -13.01 0.000844146 700 21 4 41 [+] picture button
Deadc1 ENSRNOT00000014239 deaminase domain containing 1 [Source:MarkerSymbol;Acc:MGI:1914007]
18.0788 -22.13 0.000860973 700 12 2 51 [+] picture button
Cdkn3_predicted ENSRNOT00000012985 Cyclin-dependent kinase inhibitor 3 (EC 3.1.3.48) (EC 3.1.3.16) (CDK2- associated dual-specificity phosphatase) (Kinase-associated phosphatase) (Cyclin-dependent kinase-interacting protein 2) (Cyclin- dependent kinase interactor 1). [Source:Uniprot/SWISSPROT;Acc:Q16667]Cyclin-dependent kinase inhibitor 3 (EC 3.1.3.48) (EC 3.1.3.16) (CDK2- associated dual-specificity phosphatase) (Kinase-associated phosphatase) (Cyclin-dependent kinase-interacting protein 2) (Cyclin- dependent kinase interactor 1). [Source:Uniprot/SWISSPROT;Acc:Q16667] BY ORTHOLOGY TO:ENSMMUT00000017267
16.7276 -13.21 0.000946148 700 12 4 16 [+] picture button
Mrlcb ENSRNOT00000056293 Myosin regulatory light chain 2-B, smooth muscle isoform (Myosin RLC- B). [Source:Uniprot/SWISSPROT;Acc:P18666]
18.3062 -15.04 0.000957893 237 10 1 24 [+] picture button
Scye1 ENSRNOT00000015213 small inducible cytokine subfamily E, member 1 [Source:RefSeq_peptide;Acc:NP_446209]
17.7377 -17.62 0.000957893 60 3 1 9 [+] picture button
LOC314996 ENSRNOT00000010484 C8orfK36 protein. [Source:Uniprot/SPTREMBL;Acc:Q2WGJ6]C8orfK36 protein. [Source:Uniprot/SPTREMBL;Acc:Q2WGJ6] BY ORTHOLOGY TO:ENSMODT00000002420
16.6323 -16.53 0.00103529 653 19 3 25 [+] picture button
Slc9a3r2 ENSRNOT00000004172 Na(+)/H(+) exchange regulatory cofactor NHE-RF2 (NHERF-2) (Tyrosine kinase activator protein 1) (TKA-1) (SRY-interacting protein 1) (SIP- 1) (Solute carrier family 9 isoform A3 regulatory factor 2) (NHE3 kinase A regulatory protein E3KARP) (Sodium-hydroge [Source:Uniprot/SWISSPROT;Acc:Q920G2]
16.7144 -17.03 0.00104004 258 9 9 28 [+] picture button
Dhx38_predicted ENSRNOT00000019810 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 (EC 3.6.1.-) (ATP-dependent RNA helicase DHX38) (DEAH box protein 38). [Source:Uniprot/SWISSPROT;Acc:Q92620]Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 (EC 3.6.1.-) (ATP-dependent RNA helicase DHX38) (DEAH box protein 38). [Source:Uniprot/SWISSPROT;Acc:Q92620] BY ORTHOLOGY TO:ENST00000268482
16.4745 -14.81 0.0011291 385 19 6 64 [+] picture button
Synj2 ENSRNOT00000045572 synaptojanin 2 [Source:MarkerSymbol;Acc:MGI:1201671]
17.0808 -12.82 0.00125853 473 16 4 32 [+] picture button
ENSRNOT00000055634 NOT ANNOTATED
17.9247 -20.14 0.00132951 700 10 1 9 [+] picture button
RGD1310039 ENSRNOT00000020464 Uncharacterized protein C9orf68 homolog. [Source:Uniprot/SWISSPROT;Acc:Q6AYJ3]
17.624 -19.46 0.00135428 185 9 5 25 [+] picture button
Irak1bp1_predicted ENSRNOT00000012618 interleukin-1 receptor-associated kinase 1 binding protein 1 [Source:MarkerSymbol;Acc:MGI:1929475]interleukin-1 receptor-associated kinase 1 binding protein 1 [Source:MarkerSymbol;Acc:MGI:1929475] BY ORTHOLOGY TO:ENSMUST00000034783
16.9418 -8.72 0.00148018 253 13 3 43 [+] picture button
RGD1562899_predicted ENSRNOT00000002518 Rab15 effector protein [Source:RefSeq_peptide;Acc:NP_001025045]Rab15 effector protein [Source:RefSeq_peptide;Acc:NP_001025045] BY ORTHOLOGY TO:ENSMMUT00000030595
16.3022 -16.67 0.00149473 700 21 4 30 [+] picture button
ENSRNOT00000029243 NOT ANNOTATED
16.6072 -16.92 0.00153662 700 13 1 16 [+] picture button
RGD1564027_predicted ENSRNOT00000009669 NOT ANNOTATED
16.6464 -16.35 0.00155664 700 7 1 8 [+] picture button

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Download table: GFF TXT
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