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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-30c-1*

825 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Gne ENSRNOT00000060219 Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase (UDP-GlcNAc-2-epimerase/ManAc kinase) [Includes: UDP-N- acetylglucosamine 2-epimerase (EC 5.1.3.14) (Uridine diphosphate-N- acetylglucosamine-2-epimerase) (UDP-GlcNAc-2-epimerase) [Source:Uniprot/SWISSPROT;Acc:O35826]
20.7456 -30.55 0.000001 308 17 4 53 [+] picture button
Gne ENSRNOT00000019532 Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase (UDP-GlcNAc-2-epimerase/ManAc kinase) [Includes: UDP-N- acetylglucosamine 2-epimerase (EC 5.1.3.14) (Uridine diphosphate-N- acetylglucosamine-2-epimerase) (UDP-GlcNAc-2-epimerase) [Source:Uniprot/SWISSPROT;Acc:O35826]
20.7687 -30.55 0.000001 305 15 1 40 [+] picture button
Tnfaip8l2 ENSRNOT00000028642 Tumor necrosis factor, alpha-induced protein 8-like protein 2. [Source:Uniprot/SWISSPROT;Acc:Q6AYJ8]
16.7489 -22.9 0.000001 475 17 7 27 [+] picture button
RGD1311045_predicted ENSRNOT00000005587 E04F6.2 [Source:RefSeq_peptide;Acc:NP_495496]E04F6.2 [Source:RefSeq_peptide;Acc:NP_495496] BY ORTHOLOGY TO:E04F6.2
16.9838 -27.09 0.00000836763 700 13 1 23 [+] picture button
Pla2g2a ENSRNOT00000022827 Phospholipase A2, membrane associated precursor (EC 3.1.1.4) (Phosphatidylcholine 2-acylhydrolase) (Group IIA phospholipase A2) (GIIC sPLA2). [Source:Uniprot/SWISSPROT;Acc:P14423]
17.2829 -23.85 0.0000107683 266 12 4 22 [+] picture button
Dnase2b ENSRNOT00000021861 Deoxyribonuclease-2-beta precursor (EC 3.1.22.1) (Deoxyribonuclease II beta) (DNase II beta) (DNase2-like acid DNase) (DNase II-like acid DNase) (Endonuclease DLAD). [Source:Uniprot/SWISSPROT;Acc:Q9QZK9]
18.1925 -15.04 0.0000211344 250 13 3 27 [+] picture button
RT1-Db1 ENSRNOT00000000522 RT1 class II histocompatibility antigen, D-1 beta chain precursor. [Source:Uniprot/SWISSPROT;Acc:P18211]
17.781 -25.55 0.0000236983 389 12 2 22 [+] picture button
Pnpla2_predicted ENSRNOT00000025319 Patatin-like phospholipase domain-containing protein 2 (EC 3.1.1.3) (Adipose triglyceride lipase). [Source:Uniprot/SWISSPROT;Acc:P0C548]
18.0324 -26.24 0.0000343509 667 19 5 31 [+] picture button
LOC500532 ENSRNOT00000056882 hypothetical protein LOC616005 [Source:RefSeq_peptide;Acc:NP_001070409]hypothetical protein LOC616005 [Source:RefSeq_peptide;Acc:NP_001070409] BY ORTHOLOGY TO:ENSBTAT00000016395
16.5939 -20.84 0.0000479969 700 22 6 30 [+] picture button
Pstpip1_predicted ENSRNOT00000022023 Proline-serine-threonine phosphatase-interacting protein 1 (PEST phosphatase-interacting protein 1) (CD2-binding protein 1) (H-PIP). [Source:Uniprot/SWISSPROT;Acc:O43586]Proline-serine-threonine phosphatase-interacting protein 1 (PEST phosphatase-interacting protein 1) (CD2-binding protein 1) (H-PIP). [Source:Uniprot/SWISSPROT;Acc:O43586] BY ORTHOLOGY TO:ENSMMUT00000014200
17.9421 -22.33 0.0000496137 700 16 3 23 [+] picture button
ENSRNOT00000043571 PREDICTED: Pan troglodytes similar to myosin:SUBUNIT=regulatory light chain (LOC471984), mRNA. [Source:RefSeq_dna;Acc:XR_024257]PREDICTED: Pan troglodytes similar to myosin:SUBUNIT=regulatory light chain (LOC471984), mRNA. [Source:RefSeq_dna;Acc:XR_024257] BY ORTHOLOGY TO:ENSPTRT00000018070
17.0954 -23.47 0.0000593851 700 12 2 16 [+] picture button
Rtel1 ENSRNOT00000029336 Rtel1 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5RJZ1]
16.905 -22.34 0.0000708318 700 18 1 21 [+] picture button
Psenen ENSRNOT00000028438 presenilin enhancer 2 homolog [Source:RefSeq_peptide;Acc:NP_001008764]
17.5103 -22.29 0.0000770827 122 4 5 6 [+] picture button
RGD1563998_predicted ENSRNOT00000052377 Signal peptide, CUB and EGF-like domain-containing protein 2 precursor (Protein CEGP1). [Source:Uniprot/SWISSPROT;Acc:Q9NQ36]Signal peptide, CUB and EGF-like domain-containing protein 2 precursor (Protein CEGP1). [Source:Uniprot/SWISSPROT;Acc:Q9NQ36] BY ORTHOLOGY TO:SINFRUT00000127884
17.0555 -18.83 0.0000792791 183 9 7 31 [+] picture button
Art1_predicted ENSRNOT00000027427 ADP-ribosyltransferase 1 [Source:MarkerSymbol;Acc:MGI:107511]ADP-ribosyltransferase 1 [Source:MarkerSymbol;Acc:MGI:107511] BY ORTHOLOGY TO:ENSMUST00000033300
16.5756 -27.21 0.0000945274 351 14 5 37 [+] picture button
Tcf2 ENSRNOT00000003507 transcription factor 2 [Source:MarkerSymbol;Acc:MGI:98505]
17.2161 -23.46 0.0000952519 700 19 7 30 [+] picture button
Sema3g ENSRNOT00000025656 Semaphorin 3G (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5CCT7]
17.3198 -23.21 0.0000952519 700 15 3 19 [+] picture button
Itpka ENSRNOT00000007247 Inositol-trisphosphate 3-kinase A (EC 2.7.1.127) (Inositol 1,4,5- trisphosphate 3-kinase A) (IP3K A) (IP3 3-kinase A). [Source:Uniprot/SWISSPROT;Acc:P17105]
17.9483 -22.76 0.000102636 378 16 6 42 [+] picture button
Hist1h1a_predicted ENSRNOT00000023054 histone cluster 1, H1a [Source:MarkerSymbol;Acc:MGI:1931523]histone cluster 1, H1a [Source:MarkerSymbol;Acc:MGI:1931523] BY ORTHOLOGY TO:ENSMUST00000055770
18.2532 -29.08 0.000105677 700 18 1 25 [+] picture button
LOC680865 ENSRNOT00000020162 testis expressed gene 13 [Source:MarkerSymbol;Acc:MGI:1890544]testis expressed gene 13 [Source:MarkerSymbol;Acc:MGI:1890544] BY ORTHOLOGY TO:ENSMUST00000044179
16.6976 -25.24 0.000112249 700 17 2 16 [+] picture button
Olr1632_predicted ENSRNOT00000060671 olfactory receptor 1632 (predicted) (Olr1632_predicted), mRNA [Source:RefSeq_dna;Acc:NM_001000836]
16.7842 -21.69 0.000113334 700 11 1 11 [+] picture button
RGD1306763_predicted ENSRNOT00000007598 FAD-dependent oxidoreductase domain containing 2 [Source:RefSeq_peptide;Acc:NP_079231]FAD-dependent oxidoreductase domain containing 2 [Source:RefSeq_peptide;Acc:NP_079231] BY ORTHOLOGY TO:ENST00000216187
16.8701 -25.38 0.00011725 700 17 3 19 [+] picture button
RGD1306094 ENSRNOT00000031756 LRRGT00044. [Source:Uniprot/SPTREMBL;Acc:Q6TXF5]
16.9424 -18.97 0.00011832 700 17 3 39 [+] picture button
Prp15 ENSRNOT00000007119 proline-rich protein 15 [Source:RefSeq_peptide;Acc:NP_036764]
17.6423 -27.57 0.000123445 535 13 1 19 [+] picture button
Tmem19 ENSRNOT00000005310 Transmembrane protein 19. [Source:Uniprot/SWISSPROT;Acc:Q6P726]
17.2792 -18.79 0.000123851 522 16 2 26 [+] picture button
Gimap7 ENSRNOT00000059167 GTPase, IMAP family member 7 [Source:RefSeq_peptide;Acc:NP_001019499]
16.4935 -22.66 0.000131707 389 18 3 33 [+] picture button
Zdbf2 ENSRNOT00000016038 zinc finger, DBF-type containing 2 [Source:MarkerSymbol;Acc:MGI:1921134]
16.7633 -20.13 0.000144437 700 11 2 9 [+] picture button
Ccr7 ENSRNOT00000014163 chemokine (C-C motif) receptor 7 [Source:RefSeq_peptide;Acc:NP_955783]
17.8384 -25.77 0.000226731 700 19 6 25 [+] picture button
Rbm4_predicted ENSRNOT00000026611 LOC474154 protein. [Source:Uniprot/SPTREMBL;Acc:Q5U212]
17.1692 -20.39 0.000268334 258 12 4 33 [+] picture button
Copz2 ENSRNOT00000012276 coatomer protein complex, subunit zeta 2 [Source:MarkerSymbol;Acc:MGI:1929008]
18.1708 -29.81 0.000304439 700 14 2 20 [+] picture button
Ehmt2 ENSRNOT00000047370 HLA-B associated transcript 8 [Source:RefSeq_peptide;Acc:NP_997628]
17.8184 -32.81 0.000380805 700 19 6 27 [+] picture button
Nob1p ENSRNOT00000034386 RNA-binding protein NOB1. [Source:Uniprot/SWISSPROT;Acc:Q6VEU1]
18.3062 -20.89 0.000443883 288 16 4 50 [+] picture button
Ceacam20_predicted ENSRNOT00000026060 Carcinoembryonic antigen-related cell adhesion molecule 20 precursor. [Source:Uniprot/SWISSPROT;Acc:Q6UY09]Carcinoembryonic antigen-related cell adhesion molecule 20 precursor. [Source:Uniprot/SWISSPROT;Acc:Q6UY09] BY ORTHOLOGY TO:ENSBTAT00000014658
17.8514 -23.33 0.000447405 179 9 3 22 [+] picture button
LOC682185 ENSRNOT00000034106 Protein phosphatase 1 regulatory subunit 3D (Protein phosphatase 1, regulatory subunit 6) (Protein phosphatase 1-binding subunit R6). [Source:Uniprot/SWISSPROT;Acc:O95685]Protein phosphatase 1 regulatory subunit 3D (Protein phosphatase 1, regulatory subunit 6) (Protein phosphatase 1-binding subunit R6). [Source:Uniprot/SWISSPROT;Acc:O95685] BY ORTHOLOGY TO:ENSMMUT00000027350
16.5939 -17.68 0.000490891 700 23 3 31 [+] picture button
RGD1563128_predicted ENSRNOT00000037318 Homolog of Homo sapiens "ADP-ribosylation factor-like protein 8 [Source:IPI;Acc:IPI00102036]"Homolog of Homo sapiens "ADP-ribosylation factor-like protein 8 [Source:IPI;Acc:IPI00102036]" BY ORTHOLOGY TO:SINFRUT00000161749
18.0674 -30.88 0.000508739 714 15 2 24 [+] picture button
Vps53_predicted ENSRNOT00000010010 Vacuolar protein sorting-associated protein 53 homolog. [Source:Uniprot/SWISSPROT;Acc:Q5VIR6]Vacuolar protein sorting-associated protein 53 homolog. [Source:Uniprot/SWISSPROT;Acc:Q5VIR6] BY ORTHOLOGY TO:ENSMMUT00000004311
16.6976 -21.46 0.000559892 700 17 2 30 [+] picture button
Sdf2_predicted ENSRNOT00000016297 Stromal cell-derived factor 2 precursor (SDF-2). [Source:Uniprot/SWISSPROT;Acc:Q99470]Stromal cell-derived factor 2 precursor (SDF-2). [Source:Uniprot/SWISSPROT;Acc:Q99470] BY ORTHOLOGY TO:ENST00000247020
18.3349 -22.58 0.00057411 330 16 8 58 [+] picture button
RGD1564340_predicted ENSRNOT00000017697 cDNA sequence BC051628 [Source:MarkerSymbol;Acc:MGI:3051572]cDNA sequence BC051628 [Source:MarkerSymbol;Acc:MGI:3051572] BY ORTHOLOGY TO:ENSMUST00000050026
17.7347 -24.09 0.000641193 700 17 4 30 [+] picture button
LOC685755 ENSRNOT00000046248 LRRGT00039. [Source:Uniprot/SPTREMBL;Acc:Q6TXG0]
17.3725 -23.39 0.000661835 700 14 1 21 [+] picture button
LOC246120 ENSRNOT00000001872 LAMA-like protein 2 precursor. [Source:Uniprot/SWISSPROT;Acc:Q4QQW8]
17.8741 -22.79 0.000693724 415 18 3 43 [+] picture button
S100a3 ENSRNOT00000016034 Protein S100-A3 (S100 calcium-binding protein A3) (Protein S-100E). [Source:Uniprot/SWISSPROT;Acc:P62819]
17.4012 -21.28 0.000767312 317 16 2 50 [+] picture button
LOC498396 ENSRNOT00000058068 NOT ANNOTATED
17.8514 -22.48 0.000789347 234 10 1 24 [+] picture button
Rtel1 ENSRNOT00000055030 Rtel1 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5RJZ1]
16.8013 -21.93 0.000912269 700 16 2 26 [+] picture button
RGD1311283_predicted ENSRNOT00000000124 Zinc finger protein KIAA1802. [Source:Uniprot/SWISSPROT;Acc:Q96JM3]Zinc finger protein KIAA1802. [Source:Uniprot/SWISSPROT;Acc:Q96JM3] BY ORTHOLOGY TO:ENSMODT00000003897
18.1464 -27.37 0.0010392 700 19 5 56 [+] picture button
Vmd2l1_predicted ENSRNOT00000004973 Bestrophin-2 (Vitelliform macular dystrophy 2-like protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8NFU1]Bestrophin-2 (Vitelliform macular dystrophy 2-like protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8NFU1] BY ORTHOLOGY TO:SINFRUT00000151123
18.4687 -26.14 0.00109654 364 15 4 37 [+] picture button
Zmynd15_predicted ENSRNOT00000026375 Zinc finger MYND domain-containing protein 15. [Source:Uniprot/SWISSPROT;Acc:Q9H091]Zinc finger MYND domain-containing protein 15. [Source:Uniprot/SWISSPROT;Acc:Q9H091] BY ORTHOLOGY TO:ENSMODT00000007093
16.4901 -24.13 0.00110038 700 14 4 13 [+] picture button
Mvp ENSRNOT00000027360 Major vault protein (MVP). [Source:Uniprot/SWISSPROT;Acc:Q62667]
18.761 -28 0.00110786 109 6 3 22 [+] picture button
Rdm1_predicted ENSRNOT00000028174 hypothetical protein LOC492461 [Source:RefSeq_peptide;Acc:NP_001007334]hypothetical protein LOC492461 [Source:RefSeq_peptide;Acc:NP_001007334] BY ORTHOLOGY TO:ENSDART00000055676
16.5939 -27.17 0.0011166 700 15 2 33 [+] picture button
Dhx38_predicted ENSRNOT00000019810 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 (EC 3.6.1.-) (ATP-dependent RNA helicase DHX38) (DEAH box protein 38). [Source:Uniprot/SWISSPROT;Acc:Q92620]Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 (EC 3.6.1.-) (ATP-dependent RNA helicase DHX38) (DEAH box protein 38). [Source:Uniprot/SWISSPROT;Acc:Q92620] BY ORTHOLOGY TO:ENST00000268482
16.5851 -21.33 0.0011291 385 19 6 64 [+] picture button
Srpk3 ENSRNOT00000026211 serine/arginine-rich protein specific kinase 3 [Source:RefSeq_peptide;Acc:NP_908934]
18.4199 -23.35 0.00123096 249 14 4 45 [+] picture button

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Download table: GFF TXT
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