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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-30c

1096 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Mttp ENSRNOT00000014631 microsomal triglyceride transfer protein [Source:MarkerSymbol;Acc:MGI:106926]microsomal triglyceride transfer protein [Source:MarkerSymbol;Acc:MGI:106926] BY ORTHOLOGY TO:ENSMUST00000029805
15.9001 -15.31 3.26485e-09 1196 6 7 5 [+] picture button
RGD1565561_predicted ENSRNOT00000036978 Membrane-bound O-acyltransferase domain-containing protein 1 (EC 2.3.-.-) (O-acyltransferase domain-containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q6ZNC8]Membrane-bound O-acyltransferase domain-containing protein 1 (EC 2.3.-.-) (O-acyltransferase domain-containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q6ZNC8] BY ORTHOLOGY TO:ENSMODT00000014424
16.2212 -19.36 3.91688e-09 700 17 6 23 [+] picture button
Mkrn3_predicted ENSRNOT00000013551 Makorin-3 (Zinc finger protein 127) (RING finger protein 63). [Source:Uniprot/SWISSPROT;Acc:Q13064]Makorin-3 (Zinc finger protein 127) (RING finger protein 63). [Source:Uniprot/SWISSPROT;Acc:Q13064] BY ORTHOLOGY TO:ENST00000314520
16.5423 -18.71 6.10598e-09 700 19 6 33 [+] picture button
Ppargc1b ENSRNOT00000023661 Peroxisome proliferator-activated receptor gamma coactivator 1-beta (PPAR gamma coactivator-1beta) (PPARGC-1-beta) (PGC-1-beta). [Source:Uniprot/SWISSPROT;Acc:Q811R2]
16.6303 -10.75 6.86984e-09 190 5 14 8 [+] picture button
RGD1305961_predicted ENSRNOT00000007701 Protein FAM49A. [Source:Uniprot/SWISSPROT;Acc:Q9H0Q0]Protein FAM49A. [Source:Uniprot/SWISSPROT;Acc:Q9H0Q0] BY ORTHOLOGY TO:ENSGACT00000006313
17.049 -16.45 1.72474e-08 694 14 10 15 [+] picture button
Ubadc1 ENSRNOT00000024352 Ubiquitin-associated domain-containing protein 1 (E3 ubiquitin-protein ligase subunit KPC2) (Kip1 ubiquitination-promoting complex protein 2). [Source:Uniprot/SWISSPROT;Acc:Q5XIR9]
16.7362 -15.71 2.85949e-08 406 20 9 57 [+] picture button
Gfpt2 ENSRNOT00000003770 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 2 (EC 2.6.1.16) (Hexosephosphate aminotransferase 2) (D-fructose-6- phosphate amidotransferase 2) (GFAT 2) (GFAT2). [Source:Uniprot/SWISSPROT;Acc:Q4KMC4]
17.0339 -23.98 5.2207e-08 700 22 7 37 [+] picture button
RGD1559997_predicted ENSRNOT00000019121 Ras-related protein Rab-32. [Source:Uniprot/SWISSPROT;Acc:Q13637]Ras-related protein Rab-32. [Source:Uniprot/SWISSPROT;Acc:Q13637] BY ORTHOLOGY TO:ENST00000367495
15.5886 -11.11 5.26798e-08 700 24 5 36 [+] picture button
LOC679158 ENSRNOT00000004542 Transcription factor Sox-3. [Source:Uniprot/SWISSPROT;Acc:Q6EJB7]Transcription factor Sox-3. [Source:Uniprot/SWISSPROT;Acc:Q6EJB7] BY ORTHOLOGY TO:ENSDART00000075617
16.2057 -22.05 6.9473e-08 700 17 5 25 [+] picture button
Asb3 ENSRNOT00000042105 ankyrin repeat and SOCS box-containing protein 3 [Source:MarkerSymbol;Acc:MGI:1929749]
15.9767 -12.48 1.00099e-07 700 25 3 44 [+] picture button
Herc2_predicted ENSRNOT00000019245 Probable E3 ubiquitin-protein ligase HERC2 (EC 6.3.2.-) (HECT domain and RCC1-like domain-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:O95714]Probable E3 ubiquitin-protein ligase HERC2 (EC 6.3.2.-) (HECT domain and RCC1-like domain-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:O95714] BY ORTHOLOGY TO:ENSXETT00000008985
16.0015 -16.51 1.62646e-07 700 17 7 29 [+] picture button
Sap30 ENSRNOT00000017652 sin3 associated polypeptide [Source:MarkerSymbol;Acc:MGI:1929129]
15.9504 -13.57 1.73104e-07 700 16 9 26 [+] picture button
RGD1310671_predicted ENSRNOT00000025812 Protein RMI1 homolog (75 kDa BLM-associated protein) (BLAP75) (FAAP75). [Source:Uniprot/SWISSPROT;Acc:Q9H9A7]Protein RMI1 homolog (75 kDa BLM-associated protein) (BLAP75) (FAAP75). [Source:Uniprot/SWISSPROT;Acc:Q9H9A7] BY ORTHOLOGY TO:ENSCAFT00000002145
15.7253 -11.13 2.23826e-07 298 13 2 39 [+] picture button
Sema3a ENSRNOT00000034692 Semaphorin-3A precursor (Semaphorin III) (Sema III). [Source:Uniprot/SWISSPROT;Acc:Q63548]
17.3668 -19.52 2.36628e-07 700 17 10 19 [+] picture button
Lmbr1l ENSRNOT00000046287 limb region 1-like homolog [Source:RefSeq_peptide;Acc:NP_001013972]
15.6918 -13.06 2.68399e-07 700 22 8 40 [+] picture button
RGD1307773_predicted ENSRNOT00000012720 RIKEN cDNA 1700012G19 gene [Source:MarkerSymbol;Acc:MGI:1914328]RIKEN cDNA 1700012G19 gene [Source:MarkerSymbol;Acc:MGI:1914328] BY ORTHOLOGY TO:ENSMUST00000053024
17.1121 -24.76 3.93233e-07 831 21 6 32 [+] picture button
Grm5 ENSRNOT00000022060 Metabotropic glutamate receptor 5 precursor (mGluR5). [Source:Uniprot/SWISSPROT;Acc:P31424]
16.1506 -7.72 5.23284e-07 700 17 8 25 [+] picture button
Crsp6 ENSRNOT00000014435 CRSP complex subunit 6 (Cofactor required for Sp1 transcriptional activation subunit 6) (Transcriptional coactivator CRSP77) (Vitamin D3 receptor-interacting protein complex 80 kDa component) (DRIP80) (Thyroid hormone receptor-associated protein complex 8 [Source:Uniprot/SWISSPROT;Acc:Q9NVC6]CRSP complex subunit 6 (Cofactor required for Sp1 transcriptional activation subunit 6) (Transcriptional coactivator CRSP77) (Vitamin D3 receptor-interacting protein complex 80 kDa component) (DRIP80) (Thyroid hormone receptor-associated protein complex 8 [Source:Uniprot/SWISSPROT;Acc:Q9NVC6] BY ORTHOLOGY TO:ENSGACT00000017509
16.8905 -10.96 5.31291e-07 360 19 6 54 [+] picture button
Fap ENSRNOT00000008148 fibroblast activation protein [Source:RefSeq_peptide;Acc:NP_620205]
16.8274 -16.19 5.44621e-07 700 15 8 33 [+] picture button
Efha1 ENSRNOT00000015233 EF-hand domain-containing family member A1. [Source:Uniprot/SWISSPROT;Acc:Q99P63]
15.3939 -12.56 7.3218e-07 1026 16 2 19 [+] picture button
Lrrc17 ENSRNOT00000017103 leucine rich repeat containing 17 [Source:RefSeq_peptide;Acc:NP_001020326]
16.465 -15.66 8.93746e-07 426 16 8 41 [+] picture button
Socs1 ENSRNOT00000003458 Suppressor of cytokine signaling 1 (SOCS-1). [Source:Uniprot/SWISSPROT;Acc:Q9QX78]
15.5849 -9.26 9.48933e-07 700 18 9 31 [+] picture button
Actl6a ENSRNOT00000015460 actin-like 6A [Source:RefSeq_peptide;Acc:NP_001034122]
16.5177 -14.66 9.50814e-07 700 19 8 31 [+] picture button
Phtf2_predicted ENSRNOT00000018493 putative homeodomain transcription factor 2 [Source:RefSeq_peptide;Acc:NP_065165]putative homeodomain transcription factor 2 [Source:RefSeq_peptide;Acc:NP_065165] BY ORTHOLOGY TO:ENSMMUT00000012584
17.3342 -18.89 1.2705e-06 700 20 8 38 [+] picture button
Galnt7 ENSRNOT00000016474 N-acetylgalactosaminyltransferase 7 (EC 2.4.1.-) (Protein-UDP acetylgalactosaminyltransferase 7) (UDP-GalNAc:polypeptide N- acetylgalactosaminyltransferase 7) (Polypeptide GalNAc transferase 7) (GalNAc-T7) (pp-GaNTase 7). [Source:Uniprot/SWISSPROT;Acc:Q9R0C5]
16.0647 -9.97 1.28746e-06 177 9 3 25 [+] picture button
Ptk9 ENSRNOT00000038032 Twinfilin-1. [Source:Uniprot/SWISSPROT;Acc:Q5RJR2]
15.4518 -15 1.35798e-06 1817 6 4 7 [+] picture button
Becn1 ENSRNOT00000027868 beclin 1 [Source:RefSeq_peptide;Acc:NP_001029289]
15.9085 -9.26 1.37006e-06 541 16 8 30 [+] picture button
Usp44_predicted ENSRNOT00000007465 Ubiquitin carboxyl-terminal hydrolase 44 (EC 3.1.2.15) (Ubiquitin thioesterase 44) (Ubiquitin-specific-processing protease 44) (Deubiquitinating enzyme 44). [Source:Uniprot/SWISSPROT;Acc:Q9H0E7]Ubiquitin carboxyl-terminal hydrolase 44 (EC 3.1.2.15) (Ubiquitin thioesterase 44) (Ubiquitin-specific-processing protease 44) (Deubiquitinating enzyme 44). [Source:Uniprot/SWISSPROT;Acc:Q9H0E7] BY ORTHOLOGY TO:ENST00000258499
16.3429 -14.26 1.45131e-06 700 13 6 27 [+] picture button
Slc5a11 ENSRNOT00000018476 Sodium-cotransporter rkST1 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9Z1F2]
15.6451 -9.84 1.59765e-06 700 17 6 41 [+] picture button
Scn8a ENSRNOT00000051270 sodium channel, voltage-gated, type VIII, alpha polypeptide [Source:RefSeq_peptide;Acc:NP_062139]
16.8704 -19.82 1.83046e-06 451 17 7 29 [+] picture button
Slc7a10 ENSRNOT00000015205 Asc-type amino acid transporter 1 (Asc-1) (D-serine transporter). [Source:Uniprot/SWISSPROT;Acc:P63116]
16.4041 -11.95 1.95638e-06 233 12 6 35 [+] picture button
Rfxdc1_predicted ENSRNOT00000030647 regulatory factor X domain containing 1 [Source:MarkerSymbol;Acc:MGI:2445208]regulatory factor X domain containing 1 [Source:MarkerSymbol;Acc:MGI:2445208] BY ORTHOLOGY TO:ENSMUST00000020054
16.5177 -15.75 2.11148e-06 700 17 7 32 [+] picture button
Wdr7 ENSRNOT00000025316 WD repeat protein 7 (TGF-beta resistance-associated protein TRAG). [Source:Uniprot/SWISSPROT;Acc:Q9ERH3]
15.6118 -9.49 2.12709e-06 700 13 2 17 [+] picture button
Doc2a ENSRNOT00000027022 Double C2-like domain-containing protein alpha (Doc2-alpha). [Source:Uniprot/SWISSPROT;Acc:P70611]
16.8566 -17.43 2.19116e-06 176 12 9 40 [+] picture button
Tmeff1 ENSRNOT00000010747 Tomoregulin-1 precursor (Transmembrane protein with EGF-like and one follistatin-like domain) (TR-1) (Protein NC1). [Source:Uniprot/SWISSPROT;Acc:Q9QYV1]
17.1964 -15.02 2.44302e-06 700 14 7 25 [+] picture button
Polr3e_predicted ENSRNOT00000040963 W06E11.1 [Source:RefSeq_peptide;Acc:NP_497229]W06E11.1 [Source:RefSeq_peptide;Acc:NP_497229] BY ORTHOLOGY TO:W06E11.1
15.5613 -10.77 2.53444e-06 720 15 7 24 [+] picture button
Rit1_predicted ENSRNOT00000027455 Ras-like without CAAX 1 [Source:RefSeq_peptide;Acc:NP_001026498]Ras-like without CAAX 1 [Source:RefSeq_peptide;Acc:NP_001026498] BY ORTHOLOGY TO:ENSGALT00000023608
15.5436 -12.14 2.57026e-06 633 19 3 31 [+] picture button
Phr1_predicted ENSRNOT00000014583 Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Protein associated with Myc) (Pam/highwire/rpm-1 protein). [Source:Uniprot/SWISSPROT;Acc:O75592]Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Protein associated with Myc) (Pam/highwire/rpm-1 protein). [Source:Uniprot/SWISSPROT;Acc:O75592] BY ORTHOLOGY TO:ENSOANT00000006918
15.946 -17.01 2.6045e-06 704 22 8 37 [+] picture button
Slc5a3 ENSRNOT00000002749 solute carrier family 5 (inositol transporters), member 3 [Source:RefSeq_peptide;Acc:NP_446167]
16.5172 -17.36 2.63095e-06 231 9 5 22 [+] picture button
Actc1 ENSRNOT00000011773 Actin, alpha cardiac muscle 1 (Alpha-cardiac actin). [Source:Uniprot/SWISSPROT;Acc:P68035]
17.4222 -10.38 2.70185e-06 163 10 10 34 [+] picture button
Trip13 ENSRNOT00000060956 Thyroid receptor-interacting protein 13 (TRIP-13) (Thyroid hormone receptor interactor 13). [Source:Uniprot/SWISSPROT;Acc:Q5XHZ9]
15.7759 -11.04 2.71554e-06 804 13 5 20 [+] picture button
Rqcd1 ENSRNOT00000021548 rcd1 (required for cell differentiation) homolog 1 [Source:RefSeq_peptide;Acc:NP_001009357]
16.1704 -13.96 2.93652e-06 700 19 7 29 [+] picture button
Ube2j1 ENSRNOT00000009812 ubiquitin-conjugating enzyme E2, J1 [Source:MarkerSymbol;Acc:MGI:1926245]
16.4537 -14.82 3.13965e-06 475 17 7 40 [+] picture button
Cblb ENSRNOT00000002719 E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b). [Source:Uniprot/SWISSPROT;Acc:Q8K4S7]
15.4686 -8.93 3.14517e-06 512 18 6 36 [+] picture button
Qdpr ENSRNOT00000004385 Dihydropteridine reductase (EC 1.5.1.34) (HDHPR) (Quinoid dihydropteridine reductase). [Source:Uniprot/SWISSPROT;Acc:P11348]
16.8207 -21.31 3.65084e-06 522 17 5 39 [+] picture button
RGD1304790 ENSRNOT00000002355 similar to CG8312-PA (RGD1304790), mRNA [Source:RefSeq_dna;Acc:NM_001039002]
18.4227 -21.58 3.70668e-06 700 15 7 20 [+] picture button
Stox2 ENSRNOT00000012744 PREDICTED: Bos taurus hypothetical LOC535434 (LOC535434), mRNA. [Source:RefSeq_dna;Acc:XR_027815]PREDICTED: Bos taurus hypothetical LOC535434 (LOC535434), mRNA. [Source:RefSeq_dna;Acc:XR_027815] BY ORTHOLOGY TO:ENSBTAT00000011697
17.1971 -17.72 3.74152e-06 412 18 8 43 [+] picture button
RGD1306729_predicted ENSRNOT00000004638 Homolog of Gallus gallus "Chick atrial myosin heavy chain. [Source:Uniprot/SPTREMBL;Acc:Q910C5]"Homolog of Gallus gallus "Chick atrial myosin heavy chain. [Source:Uniprot/SPTREMBL;Acc:Q910C5]" BY ORTHOLOGY TO:SINFRUT00000154400
15.499 -13.42 3.76654e-06 224 12 5 56 [+] picture button
RGD1561189_predicted ENSRNOT00000027217 RIKEN cDNA 1300010M03 gene [Source:MarkerSymbol;Acc:MGI:1915248]RIKEN cDNA 1300010M03 gene [Source:MarkerSymbol;Acc:MGI:1915248] BY ORTHOLOGY TO:ENSMUST00000017946
16.6368 -14.86 3.88187e-06 640 20 5 30 [+] picture button
Q45N69_RAT ENSRNOT00000011405 Dedicator of cytokinesis 7 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q45N69]
16.2461 -13.17 4.06464e-06 700 18 7 31 [+] picture button

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Download table: GFF TXT
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