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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-30a

1069 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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RGD1565561_predicted ENSRNOT00000036978 Membrane-bound O-acyltransferase domain-containing protein 1 (EC 2.3.-.-) (O-acyltransferase domain-containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q6ZNC8]Membrane-bound O-acyltransferase domain-containing protein 1 (EC 2.3.-.-) (O-acyltransferase domain-containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q6ZNC8] BY ORTHOLOGY TO:ENSMODT00000014424
16.9233 -17.39 3.91688e-09 700 17 6 23 [+] picture button
Mkrn3_predicted ENSRNOT00000013551 Makorin-3 (Zinc finger protein 127) (RING finger protein 63). [Source:Uniprot/SWISSPROT;Acc:Q13064]Makorin-3 (Zinc finger protein 127) (RING finger protein 63). [Source:Uniprot/SWISSPROT;Acc:Q13064] BY ORTHOLOGY TO:ENST00000314520
18.3844 -22.46 6.10598e-09 700 19 6 33 [+] picture button
Ppargc1b ENSRNOT00000023661 Peroxisome proliferator-activated receptor gamma coactivator 1-beta (PPAR gamma coactivator-1beta) (PPARGC-1-beta) (PGC-1-beta). [Source:Uniprot/SWISSPROT;Acc:Q811R2]
17.8514 -16 6.86984e-09 190 5 14 8 [+] picture button
RGD1305961_predicted ENSRNOT00000007701 Protein FAM49A. [Source:Uniprot/SWISSPROT;Acc:Q9H0Q0]Protein FAM49A. [Source:Uniprot/SWISSPROT;Acc:Q9H0Q0] BY ORTHOLOGY TO:ENSGACT00000006313
16.8163 -16.47 1.72474e-08 694 14 10 15 [+] picture button
Map3k5 ENSRNOT00000051496 mitogen activated protein kinase kinase kinase 5 [Source:MarkerSymbol;Acc:MGI:1346876]
16.4258 -16.01 2.75869e-08 700 20 9 29 [+] picture button
Ubadc1 ENSRNOT00000024352 Ubiquitin-associated domain-containing protein 1 (E3 ubiquitin-protein ligase subunit KPC2) (Kip1 ubiquitination-promoting complex protein 2). [Source:Uniprot/SWISSPROT;Acc:Q5XIR9]
16.818 -16.74 2.85949e-08 406 20 9 57 [+] picture button
Gfpt2 ENSRNOT00000003770 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 2 (EC 2.6.1.16) (Hexosephosphate aminotransferase 2) (D-fructose-6- phosphate amidotransferase 2) (GFAT 2) (GFAT2). [Source:Uniprot/SWISSPROT;Acc:Q4KMC4]
16.0753 -15.4 5.2207e-08 700 22 7 37 [+] picture button
RGD1559997_predicted ENSRNOT00000019121 Ras-related protein Rab-32. [Source:Uniprot/SWISSPROT;Acc:Q13637]Ras-related protein Rab-32. [Source:Uniprot/SWISSPROT;Acc:Q13637] BY ORTHOLOGY TO:ENST00000367495
15.7642 -12.52 5.26798e-08 700 24 5 36 [+] picture button
Asb3 ENSRNOT00000042105 ankyrin repeat and SOCS box-containing protein 3 [Source:MarkerSymbol;Acc:MGI:1929749]
15.7365 -10.78 1.00099e-07 700 25 3 44 [+] picture button
Dll4_predicted ENSRNOT00000018970 Delta-like protein 4 precursor (Drosophila Delta homolog 4). [Source:Uniprot/SWISSPROT;Acc:Q9NR61]Delta-like protein 4 precursor (Drosophila Delta homolog 4). [Source:Uniprot/SWISSPROT;Acc:Q9NR61] BY ORTHOLOGY TO:ENSOANT00000019930
16.1817 -15.84 1.61718e-07 700 20 7 32 [+] picture button
Sap30 ENSRNOT00000017652 sin3 associated polypeptide [Source:MarkerSymbol;Acc:MGI:1929129]
17.2814 -15.36 1.73104e-07 700 16 9 26 [+] picture button
RGD1310671_predicted ENSRNOT00000025812 Protein RMI1 homolog (75 kDa BLM-associated protein) (BLAP75) (FAAP75). [Source:Uniprot/SWISSPROT;Acc:Q9H9A7]Protein RMI1 homolog (75 kDa BLM-associated protein) (BLAP75) (FAAP75). [Source:Uniprot/SWISSPROT;Acc:Q9H9A7] BY ORTHOLOGY TO:ENSCAFT00000002145
16.1459 -15.5 2.23826e-07 298 13 2 39 [+] picture button
Sema3a ENSRNOT00000034692 Semaphorin-3A precursor (Semaphorin III) (Sema III). [Source:Uniprot/SWISSPROT;Acc:Q63548]
17.0316 -19.03 2.36628e-07 700 17 10 19 [+] picture button
Lmbr1l ENSRNOT00000046287 limb region 1-like homolog [Source:RefSeq_peptide;Acc:NP_001013972]
15.5567 -12.81 2.68399e-07 700 22 8 40 [+] picture button
Jag2 ENSRNOT00000019213 Jagged-2 (Jagged2) (Fragment). [Source:Uniprot/SWISSPROT;Acc:P97607]
15.9185 -18.38 3.5211e-07 278 13 9 48 [+] picture button
RGD1307773_predicted ENSRNOT00000012720 RIKEN cDNA 1700012G19 gene [Source:MarkerSymbol;Acc:MGI:1914328]RIKEN cDNA 1700012G19 gene [Source:MarkerSymbol;Acc:MGI:1914328] BY ORTHOLOGY TO:ENSMUST00000053024
15.5528 -17.33 3.93233e-07 831 21 6 32 [+] picture button
Grm5 ENSRNOT00000022060 Metabotropic glutamate receptor 5 precursor (mGluR5). [Source:Uniprot/SWISSPROT;Acc:P31424]
16.1213 -13.22 5.23284e-07 700 17 8 25 [+] picture button
Crsp6 ENSRNOT00000014435 CRSP complex subunit 6 (Cofactor required for Sp1 transcriptional activation subunit 6) (Transcriptional coactivator CRSP77) (Vitamin D3 receptor-interacting protein complex 80 kDa component) (DRIP80) (Thyroid hormone receptor-associated protein complex 8 [Source:Uniprot/SWISSPROT;Acc:Q9NVC6]CRSP complex subunit 6 (Cofactor required for Sp1 transcriptional activation subunit 6) (Transcriptional coactivator CRSP77) (Vitamin D3 receptor-interacting protein complex 80 kDa component) (DRIP80) (Thyroid hormone receptor-associated protein complex 8 [Source:Uniprot/SWISSPROT;Acc:Q9NVC6] BY ORTHOLOGY TO:ENSGACT00000017509
16.416 -9.54 5.31291e-07 360 19 6 54 [+] picture button
Fap ENSRNOT00000008148 fibroblast activation protein [Source:RefSeq_peptide;Acc:NP_620205]
16.8013 -16.64 5.44621e-07 700 15 8 33 [+] picture button
Lrrc17 ENSRNOT00000017103 leucine rich repeat containing 17 [Source:RefSeq_peptide;Acc:NP_001020326]
15.8878 -13.53 8.93746e-07 426 16 8 41 [+] picture button
Smc5l1_predicted ENSRNOT00000042241 structural maintenance of chromosomes 5 [Source:MarkerSymbol;Acc:MGI:2385088]structural maintenance of chromosomes 5 [Source:MarkerSymbol;Acc:MGI:2385088] BY ORTHOLOGY TO:ENSMUST00000036334
16.2596 -8.25 9.20526e-07 86 5 3 13 [+] picture button
Socs1 ENSRNOT00000003458 Suppressor of cytokine signaling 1 (SOCS-1). [Source:Uniprot/SWISSPROT;Acc:Q9QX78]
15.6572 -12.89 9.48933e-07 700 18 9 31 [+] picture button
Actl6a ENSRNOT00000015460 actin-like 6A [Source:RefSeq_peptide;Acc:NP_001034122]
15.7642 -12.81 9.50814e-07 700 19 8 31 [+] picture button
Asah1 ENSRNOT00000013463 N-acylsphingosine amidohydrolase 1 [Source:RefSeq_peptide;Acc:NP_445859]
15.591 -11.24 1.05854e-06 1044 7 3 9 [+] picture button
Phtf2_predicted ENSRNOT00000018493 putative homeodomain transcription factor 2 [Source:RefSeq_peptide;Acc:NP_065165]putative homeodomain transcription factor 2 [Source:RefSeq_peptide;Acc:NP_065165] BY ORTHOLOGY TO:ENSMMUT00000012584
15.8414 -17.68 1.2705e-06 700 20 8 38 [+] picture button
Becn1 ENSRNOT00000027868 beclin 1 [Source:RefSeq_peptide;Acc:NP_001029289]
15.9839 -10.96 1.37006e-06 541 16 8 30 [+] picture button
Usp44_predicted ENSRNOT00000007465 Ubiquitin carboxyl-terminal hydrolase 44 (EC 3.1.2.15) (Ubiquitin thioesterase 44) (Ubiquitin-specific-processing protease 44) (Deubiquitinating enzyme 44). [Source:Uniprot/SWISSPROT;Acc:Q9H0E7]Ubiquitin carboxyl-terminal hydrolase 44 (EC 3.1.2.15) (Ubiquitin thioesterase 44) (Ubiquitin-specific-processing protease 44) (Deubiquitinating enzyme 44). [Source:Uniprot/SWISSPROT;Acc:Q9H0E7] BY ORTHOLOGY TO:ENST00000258499
16.3144 -14.32 1.45131e-06 700 13 6 27 [+] picture button
Scn8a ENSRNOT00000051270 sodium channel, voltage-gated, type VIII, alpha polypeptide [Source:RefSeq_peptide;Acc:NP_062139]
16.1912 -12.4 1.83046e-06 451 17 7 29 [+] picture button
Slc7a10 ENSRNOT00000015205 Asc-type amino acid transporter 1 (Asc-1) (D-serine transporter). [Source:Uniprot/SWISSPROT;Acc:P63116]
18.1925 -15.5 1.95638e-06 233 12 6 35 [+] picture button
Rfxdc1_predicted ENSRNOT00000030647 regulatory factor X domain containing 1 [Source:MarkerSymbol;Acc:MGI:2445208]regulatory factor X domain containing 1 [Source:MarkerSymbol;Acc:MGI:2445208] BY ORTHOLOGY TO:ENSMUST00000020054
18.0458 -20.58 2.11148e-06 700 17 7 32 [+] picture button
Wdr7 ENSRNOT00000025316 WD repeat protein 7 (TGF-beta resistance-associated protein TRAG). [Source:Uniprot/SWISSPROT;Acc:Q9ERH3]
15.58 -12.14 2.12709e-06 700 13 2 17 [+] picture button
Tmeff1 ENSRNOT00000010747 Tomoregulin-1 precursor (Transmembrane protein with EGF-like and one follistatin-like domain) (TR-1) (Protein NC1). [Source:Uniprot/SWISSPROT;Acc:Q9QYV1]
16.4434 -15.07 2.44302e-06 700 14 7 25 [+] picture button
Polr3e_predicted ENSRNOT00000040963 W06E11.1 [Source:RefSeq_peptide;Acc:NP_497229]W06E11.1 [Source:RefSeq_peptide;Acc:NP_497229] BY ORTHOLOGY TO:W06E11.1
16.1505 -13.49 2.53444e-06 720 15 7 24 [+] picture button
Slc5a3 ENSRNOT00000002749 solute carrier family 5 (inositol transporters), member 3 [Source:RefSeq_peptide;Acc:NP_446167]
16.6007 -16.5 2.63095e-06 231 9 5 22 [+] picture button
Actc1 ENSRNOT00000011773 Actin, alpha cardiac muscle 1 (Alpha-cardiac actin). [Source:Uniprot/SWISSPROT;Acc:P68035]
17.3966 -12.83 2.70185e-06 163 10 10 34 [+] picture button
Trip13 ENSRNOT00000060956 Thyroid receptor-interacting protein 13 (TRIP-13) (Thyroid hormone receptor interactor 13). [Source:Uniprot/SWISSPROT;Acc:Q5XHZ9]
16.5633 -20.51 2.71554e-06 804 13 5 20 [+] picture button
Rqcd1 ENSRNOT00000021548 rcd1 (required for cell differentiation) homolog 1 [Source:RefSeq_peptide;Acc:NP_001009357]
17.8073 -20.56 2.93652e-06 700 19 7 29 [+] picture button
Ube2j1 ENSRNOT00000009812 ubiquitin-conjugating enzyme E2, J1 [Source:MarkerSymbol;Acc:MGI:1926245]
16.5328 -16.26 3.13965e-06 475 17 7 40 [+] picture button
Cblb ENSRNOT00000002719 E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b). [Source:Uniprot/SWISSPROT;Acc:Q8K4S7]
15.5423 -11.25 3.14517e-06 512 18 6 36 [+] picture button
Qdpr ENSRNOT00000004385 Dihydropteridine reductase (EC 1.5.1.34) (HDHPR) (Quinoid dihydropteridine reductase). [Source:Uniprot/SWISSPROT;Acc:P11348]
16.2589 -19.54 3.65084e-06 522 17 5 39 [+] picture button
RGD1304790 ENSRNOT00000002355 similar to CG8312-PA (RGD1304790), mRNA [Source:RefSeq_dna;Acc:NM_001039002]
16.1164 -12.56 3.70668e-06 700 15 7 20 [+] picture button
Stox2 ENSRNOT00000012744 PREDICTED: Bos taurus hypothetical LOC535434 (LOC535434), mRNA. [Source:RefSeq_dna;Acc:XR_027815]PREDICTED: Bos taurus hypothetical LOC535434 (LOC535434), mRNA. [Source:RefSeq_dna;Acc:XR_027815] BY ORTHOLOGY TO:ENSBTAT00000011697
17.1712 -19.12 3.74152e-06 412 18 8 43 [+] picture button
RGD1306729_predicted ENSRNOT00000004638 Homolog of Gallus gallus "Chick atrial myosin heavy chain. [Source:Uniprot/SPTREMBL;Acc:Q910C5]"Homolog of Gallus gallus "Chick atrial myosin heavy chain. [Source:Uniprot/SPTREMBL;Acc:Q910C5]" BY ORTHOLOGY TO:SINFRUT00000154400
15.691 -14.28 3.76654e-06 224 12 5 56 [+] picture button
Q45N69_RAT ENSRNOT00000011405 Dedicator of cytokinesis 7 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q45N69]
16.7434 -11.8 4.06464e-06 700 18 7 31 [+] picture button
Fst ENSRNOT00000015680 Follistatin precursor (FS) (Activin-binding protein). [Source:Uniprot/SWISSPROT;Acc:P21674]
15.7711 -19.62 4.61708e-06 700 20 11 34 [+] picture button
Mtdh ENSRNOT00000009989 Protein LYRIC (Lysine-rich CEACAM1 co-isolated protein) (Metastasis adhesion protein) (Metadherin). [Source:Uniprot/SWISSPROT;Acc:Q9Z1W6]
16.9418 -5.97 4.75408e-06 172 6 6 15 [+] picture button
RGD1305327 ENSRNOT00000013764 Nucleolar protein 12 (25 kDa nucleolar protein). [Source:Uniprot/SWISSPROT;Acc:Q5D1Z3]
16.1459 -17.13 4.82391e-06 255 14 3 46 [+] picture button
Rev1l_predicted ENSRNOT00000025243 terminal deoxycytidyl transferase rev1terminal deoxycytidyl transferase rev1 BY ORTHOLOGY TO:AAEL002250-RA
16.8289 -16.29 4.84452e-06 700 19 8 30 [+] picture button
Pex3 ENSRNOT00000021524 Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal assembly protein PEX3). [Source:Uniprot/SWISSPROT;Acc:Q9JJK4]
15.7836 -7.67 4.97709e-06 737 16 3 23 [+] picture button
LOC686566 ENSRNOT00000038519 Grainyhead-like protein 1 homolog (Transcription factor CP2-like 2) (Transcription factor LBP-32) (NH32) (Mammalian grainyhead). [Source:Uniprot/SWISSPROT;Acc:Q9NZI5]Grainyhead-like protein 1 homolog (Transcription factor CP2-like 2) (Transcription factor LBP-32) (NH32) (Mammalian grainyhead). [Source:Uniprot/SWISSPROT;Acc:Q9NZI5] BY ORTHOLOGY TO:ENSPTRT00000021702
15.4958 -11.75 5.32025e-06 700 17 4 31 [+] picture button

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Download table: GFF TXT
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