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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-29b

1096 hits found.


Page 1 of 22
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Q99MG0_RAT ENSRNOT00000006122 Melanoma-associated antigen MG50 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q99MG0]
15.6918 -14.2 4.22318e-10 700 16 7 23 [+] picture button
Col4a5_predicted ENSRNOT00000025677 Collagen alpha-5(IV) chain precursor. [Source:Uniprot/SWISSPROT;Acc:P29400]Collagen alpha-5(IV) chain precursor. [Source:Uniprot/SWISSPROT;Acc:P29400] BY ORTHOLOGY TO:ENSGACT00000024870
17.7556 -21.94 5.94948e-10 700 16 10 27 [+] picture button
P97879-2 ENSRNOT00000005539 GRIP1_RAT Isoform 2 of P97879 - Rattus norvegicus (Rat) [Source:Uniprot/Varsplic;Acc:P97879-2]
16.8831 -16.49 1.49618e-09 700 10 11 13 [+] picture button
Col9a1 ENSRNOT00000018116 Collagen alpha-1(IX) chain (Fragment). [Source:Uniprot/SWISSPROT;Acc:P20850]
16.4145 -15.51 2.63657e-09 700 15 5 23 [+] picture button
Col6a2 ENSRNOT00000001695 Col6a2 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5EB88]
15.9476 -15.78 4.48382e-09 438 18 3 34 [+] picture button
Fem1b_predicted ENSRNOT00000009368 fem-1 homolog b [Source:RefSeq_peptide;Acc:NP_056137]fem-1 homolog b [Source:RefSeq_peptide;Acc:NP_056137] BY ORTHOLOGY TO:ENST00000306917
18.6873 -16 1.25157e-08 385 17 7 46 [+] picture button
RGD1562244_predicted ENSRNOT00000016837 SEC14 and spectrin domains 1 [Source:RefSeq_peptide;Acc:NP_835224]SEC14 and spectrin domains 1 [Source:RefSeq_peptide;Acc:NP_835224] BY ORTHOLOGY TO:ENST00000389480
17.636 -20.06 1.52961e-08 1051 10 10 13 [+] picture button
Hdac4_predicted ENSRNOT00000027622 Histone deacetylase 4 (HD4). [Source:Uniprot/SWISSPROT;Acc:Q99P99]
18.148 -19.17 1.79166e-08 583 17 7 24 [+] picture button
Adamts7 ENSRNOT00000037276 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7 [Source:MarkerSymbol;Acc:MGI:1347346]
16.6209 -16.28 2.07757e-08 700 21 8 28 [+] picture button
E130014J05Rik ENSRNOT00000046775 RIKEN cDNA E130014J05 gene [Source:MarkerSymbol;Acc:MGI:2443298]
18.4452 -18.93 3.40622e-08 700 14 4 19 [+] picture button
Hbp1 ENSRNOT00000012004 HMG box-containing protein 1 (HMG box transcription factor 1) (High mobility group box transcription factor 1). [Source:Uniprot/SWISSPROT;Acc:Q62661]
18.0205 -23.72 4.64818e-08 1058 15 9 17 [+] picture button
Has3 ENSRNOT00000027422 hyaluronan synthase 3 [Source:RefSeq_peptide;Acc:NP_758822]
15.9317 -16.95 7.19999e-08 700 15 6 33 [+] picture button
Ifi30 ENSRNOT00000026225 interferon gamma inducible protein 30 [Source:RefSeq_peptide;Acc:NP_001025197]
20.3203 -23.89 9.04478e-08 413 16 6 38 [+] picture button
Arvcf ENSRNOT00000002585 armadillo repeat gene deleted in velo-cardio-facial syndrome [Source:MarkerSymbol;Acc:MGI:109620]
15.6918 -18.78 1.27966e-07 700 14 5 29 [+] picture button
Bach2 ENSRNOT00000008309 BTB and CNC homology 2 [Source:MarkerSymbol;Acc:MGI:894679]
17.0476 -15.81 1.53955e-07 700 21 9 34 [+] picture button
1700019D03Rik ENSRNOT00000059159 RIKEN cDNA 1700019D03 gene [Source:MarkerSymbol;Acc:MGI:1914330]
17.6929 -21.19 1.5783e-07 700 13 7 21 [+] picture button
Ireb2 ENSRNOT00000017900 Iron-responsive element-binding protein 2 (IRE-BP 2) (Iron regulatory protein 2) (IRP2). [Source:Uniprot/SWISSPROT;Acc:Q62751]
16.7648 -20.13 2.28504e-07 868 16 9 24 [+] picture button
Narf ENSRNOT00000054920 Nuclear prelamin A recognition factor. [Source:Uniprot/SWISSPROT;Acc:Q2YDU6]
18.0662 -23.7 2.33245e-07 700 14 5 19 [+] picture button
LOC498736 ENSRNOT00000023611 Tubulin beta-2A chain. [Source:Uniprot/SWISSPROT;Acc:P85108]
16.7435 -12.87 2.41838e-07 189 11 9 29 [+] picture button
Col6a3 ENSRNOT00000026707 procollagen, type VI, alpha 3 [Source:MarkerSymbol;Acc:MGI:88461]
16.4936 -23.75 2.47284e-07 710 16 8 23 [+] picture button
Atad3a ENSRNOT00000045053 ATPase family, AAA domain containing 3A [Source:RefSeq_peptide;Acc:NP_001030094]
16.0335 -14.3 3.63771e-07 535 15 3 27 [+] picture button
Brwd3_predicted ENSRNOT00000057432 Bromodomain and WD repeat domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q6RI45]Bromodomain and WD repeat domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q6RI45] BY ORTHOLOGY TO:ENSOANT00000001176
16.2684 -15.55 3.9307e-07 700 20 7 28 [+] picture button
Usp52 ENSRNOT00000050792 PAB-dependent poly(A)-specific ribonuclease subunit 2 (EC 3.1.13.4) (Inactive ubiquitin carboxyl-terminal hydrolase 52). [Source:Uniprot/SWISSPROT;Acc:Q6IE70]
17.2404 -21.69 4.6957e-07 700 17 5 25 [+] picture button
Pitpnm2_predicted ENSRNOT00000047911 Membrane-associated phosphatidylinositol transfer protein 2 (Phosphatidylinositol transfer protein, membrane-associated 2) (Pyk2 N-terminal domain-interacting receptor 3) (NIR-3). [Source:Uniprot/SWISSPROT;Acc:Q9BZ72]Membrane-associated phosphatidylinositol transfer protein 2 (Phosphatidylinositol transfer protein, membrane-associated 2) (Pyk2 N-terminal domain-interacting receptor 3) (NIR-3). [Source:Uniprot/SWISSPROT;Acc:Q9BZ72] BY ORTHOLOGY TO:ENST00000280562
16.6209 -24.55 4.98419e-07 700 15 6 21 [+] picture button
LOC314655 ENSRNOT00000011976 similar to a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 10 (LOC314655), mRNA [Source:RefSeq_dna;Acc:NM_001034930]
15.4853 -14.49 6.05049e-07 700 19 4 26 [+] picture button
Chic2_predicted ENSRNOT00000003085 cysteine-rich hydrophobic domain 2 (chic1)cysteine-rich hydrophobic domain 2 (chic1) BY ORTHOLOGY TO:AAEL008924-RA
15.5437 -17.76 6.16868e-07 700 27 10 36 [+] picture button
Bak1 ENSRNOT00000000576 BCL2-antagonist/killer 1 [Source:RefSeq_peptide;Acc:NP_446264]
16.3164 -17.67 7.24948e-07 1060 16 6 21 [+] picture button
Col5a3 ENSRNOT00000027897 procollagen, type V, alpha 3 [Source:RefSeq_peptide;Acc:NP_068528]
17.4514 -21.52 1.19676e-06 783 13 6 19 [+] picture button
Ppic ENSRNOT00000023485 peptidylprolyl isomerase C [Source:RefSeq_peptide;Acc:NP_001004215]
17.2971 -17.35 1.27201e-06 648 16 6 25 [+] picture button
Xkr7 ENSRNOT00000012156 XK-related protein 7. [Source:Uniprot/SWISSPROT;Acc:Q5GH56]
16.9802 -22.31 1.34755e-06 812 19 9 23 [+] picture button
Phf5a ENSRNOT00000005837 PHD finger-like domain-containing protein 5A (PHD finger-like domain protein 5A) (Splicing factor 3B-associated 14 kDa protein) (SF3b14b). [Source:Uniprot/SWISSPROT;Acc:P83871]
17.2466 -22.21 1.42549e-06 522 16 4 32 [+] picture button
Col16a1 ENSRNOT00000045413 Col16a1 protein. [Source:Uniprot/SPTREMBL;Acc:Q568Y4]
18.2142 -17.11 1.69616e-06 195 5 6 10 [+] picture button
Zbtb5_predicted ENSRNOT00000017046 Zinc finger and BTB domain-containing protein 5. [Source:Uniprot/SWISSPROT;Acc:O15062]Zinc finger and BTB domain-containing protein 5. [Source:Uniprot/SWISSPROT;Acc:O15062] BY ORTHOLOGY TO:ENSMMUT00000025145
15.7852 -15.93 1.82235e-06 452 17 3 38 [+] picture button
Col3a1 ENSRNOT00000004956 Collagen alpha-1(III) chain precursor. [Source:Uniprot/SWISSPROT;Acc:P13941]
18.3273 -17.33 2.85587e-06 275 8 7 18 [+] picture button
Mlf1_predicted ENSRNOT00000017151 Myeloid leukemia factor 1 (Myelodysplasia-myeloid leukemia factor 1). [Source:Uniprot/SWISSPROT;Acc:P58340]Myeloid leukemia factor 1 (Myelodysplasia-myeloid leukemia factor 1). [Source:Uniprot/SWISSPROT;Acc:P58340] BY ORTHOLOGY TO:ENSGALT00000039093
18.2142 -16.06 2.98084e-06 189 12 8 40 [+] picture button
Phc1_predicted ENSRNOT00000020529 polyhomeotic-like 1 (Drosophila) [Source:MarkerSymbol;Acc:MGI:103248]polyhomeotic-like 1 (Drosophila) [Source:MarkerSymbol;Acc:MGI:103248] BY ORTHOLOGY TO:ENSMUST00000079560
16.3112 -18.64 3.04098e-06 700 15 6 24 [+] picture button
Usp22 ENSRNOT00000050061 ubiquitin specific peptidase 22 [Source:MarkerSymbol;Acc:MGI:2144157]
16.6557 -24.54 3.13884e-06 1431 9 2 10 [+] picture button
Slc22a7 ENSRNOT00000025094 solute carrier family 22 member 7 [Source:RefSeq_peptide;Acc:NP_445989]
16.208 -17.4 3.91348e-06 700 17 5 24 [+] picture button
ENSRNOT00000005819 CDNA FLJ16635 fis, clone TESTI4025268, weakly similar to 77 kDa echinoderm microtubule-associated protein. [Source:Uniprot/SPTREMBL;Acc:Q6ZMW3]CDNA FLJ16635 fis, clone TESTI4025268, weakly similar to 77 kDa echinoderm microtubule-associated protein. [Source:Uniprot/SPTREMBL;Acc:Q6ZMW3] BY ORTHOLOGY TO:ENSOANT00000024635
18.3989 -26.62 4.04434e-06 700 9 3 13 [+] picture button
RGD1311824_predicted ENSRNOT00000019670 family with sequence similarity 119, member A (FAM119A), mRNA [Source:RefSeq_dna;Acc:NM_145280]family with sequence similarity 119, member A (FAM119A), mRNA [Source:RefSeq_dna;Acc:NM_145280] BY ORTHOLOGY TO:ENSGALT00000033408
15.3893 -11.77 4.31926e-06 700 22 5 32 [+] picture button
RGD1562335_predicted ENSRNOT00000017349 CDNA FLJ10404 fis, clone NT2RM4000486 (Hypothetical protein DKFZp313I142) (FLJ10404 protein). [Source:Uniprot/SPTREMBL;Acc:Q9NW00]CDNA FLJ10404 fis, clone NT2RM4000486 (Hypothetical protein DKFZp313I142) (FLJ10404 protein). [Source:Uniprot/SPTREMBL;Acc:Q9NW00] BY ORTHOLOGY TO:SINFRUT00000128203
17.2141 -16.49 4.31956e-06 368 15 8 49 [+] picture button
Ccne1 ENSRNOT00000020014 G1/S-specific cyclin-E1. [Source:Uniprot/SWISSPROT;Acc:P39949]
15.5401 -14.25 4.98518e-06 523 14 9 45 [+] picture button
COBA1_RAT ENSRNOT00000024138 Collagen alpha-1(XI) chain precursor (Fragment). [Source:Uniprot/SWISSPROT;Acc:P20909]
15.4659 -17.68 5.12005e-06 1484 7 9 9 [+] picture button
O55168_RAT ENSRNOT00000025687 Phosphatidylinositol 3-kinase (Fragment). [Source:Uniprot/SPTREMBL;Acc:O55168]
15.751 -13.92 5.15121e-06 700 11 6 15 [+] picture button
RGD1308257 ENSRNOT00000025121 CDNA FLJ20703 fis, clone KAIA1965. [Source:Uniprot/SPTREMBL;Acc:Q9NWP4]CDNA FLJ20703 fis, clone KAIA1965. [Source:Uniprot/SPTREMBL;Acc:Q9NWP4] BY ORTHOLOGY TO:ENSMODT00000022922
16.7242 -17.12 6.19148e-06 700 21 5 33 [+] picture button
LOC499617 ENSRNOT00000000101 similar to regulatory factor X-associated protein (LOC499617), mRNA [Source:RefSeq_dna;Acc:NM_001044263]
15.9182 -16.08 6.51512e-06 852 15 5 23 [+] picture button
Bckdha ENSRNOT00000027995 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial precursor (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) (BCKDH E1-alpha) (Fragment). [Source:Uniprot/SWISSPROT;Acc:P11960]
15.4084 -15.09 6.71339e-06 316 18 6 68 [+] picture button
Elf2 ENSRNOT00000047635 E74-like factor 2 isoform 1 [Source:RefSeq_peptide;Acc:NP_001029081]
16.9001 -16.87 6.8394e-06 1158 16 8 18 [+] picture button
Parg ENSRNOT00000027071 Poly(ADP-ribose) glycohydrolase (EC 3.2.1.143). [Source:Uniprot/SWISSPROT;Acc:Q9QYM2]
15.5915 -15.29 6.88897e-06 925 19 6 22 [+] picture button
Zfp598_predicted ENSRNOT00000016816 C52E12.1 [Source:RefSeq_peptide;Acc:NP_495439]C52E12.1 [Source:RefSeq_peptide;Acc:NP_495439] BY ORTHOLOGY TO:C52E12.1.2
15.9592 -14.67 7.26172e-06 559 21 4 34 [+] picture button

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Download table: GFF TXT
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