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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-28*

735 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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ENSRNOT00000062069 NOT ANNOTATED
16.3864 -22.8 1e-06 700 41 1 10 [+] picture button
RGD1565175_predicted ENSRNOT00000018138 Trem-like transcript 1 protein precursor (TLT-1) (Triggering receptor expressed on myeloid cells-like protein 1). [Source:Uniprot/SWISSPROT;Acc:Q86YW5]Trem-like transcript 1 protein precursor (TLT-1) (Triggering receptor expressed on myeloid cells-like protein 1). [Source:Uniprot/SWISSPROT;Acc:Q86YW5] BY ORTHOLOGY TO:ENST00000373127
18.6686 -26.04 0.000272626 700 17 4 36 [+] picture button
Luzp2 ENSRNOT00000033811 leucine zipper protein 2 [Source:MarkerSymbol;Acc:MGI:1889615]
15.8868 -15.16 0.000411366 700 14 7 19 [+] picture button
Atf7ip_predicted ENSRNOT00000055703 NOT ANNOTATED
16.7676 -16.47 0.000510178 700 12 1 19 [+] picture button
Efemp1 ENSRNOT00000004764 EGF-containing fibulin-like extracellular matrix protein 1 precursor (Fibulin-3) (FIBL-3) (T16 protein). [Source:Uniprot/SWISSPROT;Acc:O35568]
17.2941 -17.14 0.000591643 431 17 10 29 [+] picture button
Adamts16_predicted ENSRNOT00000022707 NOT ANNOTATED
16.5939 -22.16 0.000692355 700 11 1 10 [+] picture button
Ak3 ENSRNOT00000020744 GTP:AMP phosphotransferase mitochondrial (EC 2.7.4.10) (Adenylate kinase 3) (AK3) (Adenylate kinase 3 alpha-like 1). [Source:Uniprot/SWISSPROT;Acc:P29411]
16.8184 -8.41 0.000744573 347 16 2 46 [+] picture button
Olr3_predicted ENSRNOT00000020448 olfactory receptor Olr3 [Source:RefSeq_peptide;Acc:NP_001000110]
16.1387 -17.84 0.00091308 700 17 2 21 [+] picture button
Morc4_predicted ENSRNOT00000034925 ZCWCC3 protein [Source:RefSeq_peptide;Acc:NP_001068577]ZCWCC3 protein [Source:RefSeq_peptide;Acc:NP_001068577] BY ORTHOLOGY TO:ENSDART00000079729
17.988 -21.64 0.00095823 700 10 4 14 [+] picture button
Q5XID9_RAT ENSRNOT00000051522 Tusc4 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5XID9]
18.0788 -23.27 0.00113923 258 15 6 48 [+] picture button
H3f3b ENSRNOT00000050223 H3 histone, family 3B (H3f3b), mRNA [Source:RefSeq_dna;Acc:NM_053985]
16.4135 -17.07 0.0011509 1004 15 3 20 [+] picture button
LOC680711 ENSRNOT00000030161 NOT ANNOTATED
16.179 -14.41 0.0015263 700 15 1 17 [+] picture button
Pak1 ENSRNOT00000049321 Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1) (p21-activated kinase 1) (PAK-1) (p68-PAK) (Alpha-PAK) (Protein kinase MUK2). [Source:Uniprot/SWISSPROT;Acc:P35465]
17.4717 -18.69 0.00155899 512 18 4 26 [+] picture button
Zfp403 ENSRNOT00000029883 Protein ZNF403 (Gametogenetin-binding protein 2). [Source:Uniprot/SWISSPROT;Acc:Q6GVH5]
17.6688 -16.96 0.00161028 436 19 11 43 [+] picture button
Nup155 ENSRNOT00000046069 Nuclear pore complex protein Nup155 (Nucleoporin Nup155) (155 kDa nucleoporin) (P140). [Source:Uniprot/SWISSPROT;Acc:P37199]
15.9255 -25.7 0.00166736 700 16 1 17 [+] picture button
Olr1340_predicted ENSRNOT00000046656 Olfactory receptor 8D4. [Source:Uniprot/SWISSPROT;Acc:Q8NGM9]Olfactory receptor 8D4. [Source:Uniprot/SWISSPROT;Acc:Q8NGM9] BY ORTHOLOGY TO:ENST00000321355
16.7522 -16.58 0.00172726 700 16 3 18 [+] picture button
Gfm ENSRNOT00000042079 Elongation factor G 1, mitochondrial precursor (mEF-G 1) (Elongation factor G1). [Source:Uniprot/SWISSPROT;Acc:Q07803]
16.0322 -20.17 0.00175197 217 11 3 31 [+] picture button
Gfm ENSRNOT00000051534 Elongation factor G 1, mitochondrial precursor (mEF-G 1) (Elongation factor G1). [Source:Uniprot/SWISSPROT;Acc:Q07803]
16.0322 -20.17 0.00175197 220 9 1 15 [+] picture button
ENSRNOT00000030041 NOT ANNOTATED
16.3864 -16.74 0.00185574 700 6 1 9 [+] picture button
LOC685325 ENSRNOT00000057203 NOT ANNOTATED
15.6277 -24.5 0.00197333 700 13 1 14 [+] picture button
Scyl1 ENSRNOT00000032387 N-terminal kinase-like protein (SCY1-like protein 1). [Source:Uniprot/SWISSPROT;Acc:Q5M9F8]
18.4199 -24.12 0.00202369 147 7 7 27 [+] picture button
Olr1012_predicted ENSRNOT00000061408 olfactory receptor Olr1012 [Source:RefSeq_peptide;Acc:NP_001000071]
17.3776 -14.32 0.00208648 700 10 2 9 [+] picture button
Wnt2b ENSRNOT00000019349 Wnt2b protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9QXK5]
19.1141 -24.68 0.0020908 589 20 5 31 [+] picture button
Mib1_predicted ENSRNOT00000018025 E3 ubiquitin-protein ligase MIB1 (EC 6.3.2.-) (Mind bomb homolog 1) (DAPK-interacting protein 1) (DIP-1) (Zinc finger ZZ type with ankyrin repeat domain protein 2). [Source:Uniprot/SWISSPROT;Acc:Q86YT6]E3 ubiquitin-protein ligase MIB1 (EC 6.3.2.-) (Mind bomb homolog 1) (DAPK-interacting protein 1) (DIP-1) (Zinc finger ZZ type with ankyrin repeat domain protein 2). [Source:Uniprot/SWISSPROT;Acc:Q86YT6] BY ORTHOLOGY TO:ENSMMUT00000014297
19.1021 -24.21 0.00211559 97 5 4 11 [+] picture button
LOC298606 ENSRNOT00000022820 Solute carrier family 25 member 34. [Source:Uniprot/SWISSPROT;Acc:Q5XIF9]
16.2596 -19.34 0.00216872 250 13 3 25 [+] picture button
Slc28a1 ENSRNOT00000025621 Sodium/nucleoside cotransporter 1 (Na(+)/nucleoside cotransporter 1) (Sodium-coupled nucleoside transporter 1) (Concentrative nucleoside transporter 1) (CNT 1). [Source:Uniprot/SWISSPROT;Acc:Q62674]
16.0322 -20.58 0.00216872 298 17 3 55 [+] picture button
Pkib ENSRNOT00000001075 cAMP-dependent protein kinase inhibitor beta (PKI-beta) (cAMP- dependent protein kinase inhibitor, testis isoform). [Source:Uniprot/SWISSPROT;Acc:P27775]
16.7318 -19.05 0.00218128 640 14 1 14 [+] picture button
ENSRNOT00000017930 NOT ANNOTATED
15.6547 -9.34 0.00228089 700 11 1 9 [+] picture button
RGD1560303_predicted ENSRNOT00000004344 predicted gene, EG237300 [Source:MarkerSymbol;Acc:MGI:3644318]predicted gene, EG237300 [Source:MarkerSymbol;Acc:MGI:3644318] BY ORTHOLOGY TO:ENSMUST00000055107
16.3046 -19.89 0.00243423 700 8 2 8 [+] picture button
Itga7 ENSRNOT00000048267 Integrin alpha-7 (H36-alpha7) [Contains: Integrin alpha-7 heavy chain; Integrin alpha-7 light chain]. [Source:Uniprot/SWISSPROT;Acc:Q63258]
18.9294 -29.06 0.00250959 700 16 1 25 [+] picture button
Igsf4a ENSRNOT00000052392 immunoglobulin superfamily, member 4A [Source:RefSeq_peptide;Acc:NP_001012201]
17.5211 -21.36 0.00253004 700 12 7 28 [+] picture button
Pkib ENSRNOT00000057363 cAMP-dependent protein kinase inhibitor beta (PKI-beta) (cAMP- dependent protein kinase inhibitor, testis isoform). [Source:Uniprot/SWISSPROT;Acc:P27775]
16.6313 -19.05 0.00259725 676 11 1 10 [+] picture button
Olr1012_predicted ENSRNOT00000061410 olfactory receptor Olr1012 [Source:RefSeq_peptide;Acc:NP_001000071]
17.2419 -14.32 0.00261944 700 12 1 11 [+] picture button
Q5XID9_RAT ENSRNOT00000031405 Tusc4 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5XID9]
16.6205 -23.27 0.00264602 700 20 1 23 [+] picture button
Slc1a4 ENSRNOT00000007002 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 [Source:RefSeq_peptide;Acc:NP_942058]
18.8641 -34.32 0.00267701 393 16 1 37 [+] picture button
Msn ENSRNOT00000043458 Moesin (Membrane-organizing extension spike protein). [Source:Uniprot/SWISSPROT;Acc:O35763]
15.453 -16.27 0.00273431 700 14 3 19 [+] picture button
RGD1304607_predicted ENSRNOT00000028079 RIKEN cDNA 2810441K11 gene [Source:MarkerSymbol;Acc:MGI:1920020]RIKEN cDNA 2810441K11 gene [Source:MarkerSymbol;Acc:MGI:1920020] BY ORTHOLOGY TO:ENSMUST00000059582
15.9575 -17.13 0.00282592 866 15 3 15 [+] picture button
Bhlhb9 ENSRNOT00000049375 basic helix-loop-helix domain containing, class B9 [Source:MarkerSymbol;Acc:MGI:1917487]
17.0087 -15.63 0.00300362 700 17 3 24 [+] picture button
LOC684383 ENSRNOT00000036499 NOT ANNOTATED
16.1267 -14.06 0.00305232 700 10 1 13 [+] picture button
Peci ENSRNOT00000060166 peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase [Source:RefSeq_peptide;Acc:NP_001006967]
16.3268 -13.37 0.00306799 700 14 1 15 [+] picture button
Sall1 ENSRNOT00000018629 sal-like 1 (Drosophila) [Source:MarkerSymbol;Acc:MGI:1889585]
15.6022 -19.32 0.00309037 494 14 11 22 [+] picture button
Dnttip1 ENSRNOT00000020280 Terminal deoxynucleotidyltransferase-interacting factor 1 (TdT- interacting factor 1) (TdIF1). [Source:Uniprot/SWISSPROT;Acc:Q91Y53]
16.4561 -21.37 0.00312479 588 19 8 39 [+] picture button
C8g_predicted ENSRNOT00000035745 Complement component C8 gamma chain precursor. [Source:Uniprot/SWISSPROT;Acc:P07360]Complement component C8 gamma chain precursor. [Source:Uniprot/SWISSPROT;Acc:P07360] BY ORTHOLOGY TO:ENST00000224181
16.081 -10.34 0.0032301 700 18 2 37 [+] picture button
V1rc42 ENSRNOT00000042484 vomeronasal V1r-type receptor V1rc42 [Source:RefSeq_peptide;Acc:NP_001009527]
15.9805 -26.13 0.00328533 700 13 1 17 [+] picture button
Morc3_predicted ENSRNOT00000049373 MORC family CW-type zinc finger protein 3 (Zinc finger CW-type coiled- coil domain protein 3). [Source:Uniprot/SWISSPROT;Acc:Q14149]MORC family CW-type zinc finger protein 3 (Zinc finger CW-type coiled- coil domain protein 3). [Source:Uniprot/SWISSPROT;Acc:Q14149] BY ORTHOLOGY TO:SINFRUT00000145794
15.5773 -13.48 0.0033091 246 14 6 41 [+] picture button
Eif5a2_predicted ENSRNOT00000015779 Eukaryotic translation initiation factor 5A isoform II (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8VHU8]
18.6473 -16.43 0.00331631 184 9 4 22 [+] picture button
Mbl1 ENSRNOT00000015723 Mannose-binding protein A precursor (MBP-A) (Mannan-binding protein). [Source:Uniprot/SWISSPROT;Acc:P19999]
16.2074 -25.58 0.00346233 403 16 2 28 [+] picture button
Dscr6_predicted ENSRNOT00000002289 Down syndrome critical region protein 6. [Source:Uniprot/SWISSPROT;Acc:P57055]Down syndrome critical region protein 6. [Source:Uniprot/SWISSPROT;Acc:P57055] BY ORTHOLOGY TO:ENSXETT00000028543
18.5901 -23.27 0.00350924 528 15 2 26 [+] picture button
Wfdc6l1 ENSRNOT00000048654 WAP four-disulfide core 6-like 1 [Source:RefSeq_peptide;Acc:NP_001008867]
16.8264 -20.44 0.00356973 700 15 4 21 [+] picture button
Alox5ap ENSRNOT00000001207 Arachidonate 5-lipoxygenase-activating protein (FLAP) (MK-886-binding protein). [Source:Uniprot/SWISSPROT;Acc:P20291]
16.1717 -23.68 0.00368436 403 20 6 41 [+] picture button

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Download table: GFF TXT
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