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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-28

741 hits found.


Page 1 of 15
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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RGD1309567_predicted ENSRNOT00000022905 phosphatidic acid phosphatase type 2d isoform 2 [Source:RefSeq_peptide;Acc:NP_001010861]phosphatidic acid phosphatase type 2d isoform 2 [Source:RefSeq_peptide;Acc:NP_001010861] BY ORTHOLOGY TO:ENSBTAT00000006027
18.1675 -26.62 2.34286e-06 339 13 5 33 [+] picture button
LOC499653 ENSRNOT00000027568 GON-4-like protein (Protein GON4) (GON-4 homolog). [Source:Uniprot/SWISSPROT;Acc:Q535K8]
17.1328 -25.41 3.85008e-06 700 20 3 30 [+] picture button
MGC109194 ENSRNOT00000012066 Protein FAM110B. [Source:Uniprot/SWISSPROT;Acc:Q5BJX5]
18.0788 -17.76 1.00924e-05 291 15 9 66 [+] picture button
Ccdc12_predicted ENSRNOT00000028426 coiled-coil domain containing 12 [Source:MarkerSymbol;Acc:MGI:1919904]coiled-coil domain containing 12 [Source:MarkerSymbol;Acc:MGI:1919904] BY ORTHOLOGY TO:ENSMUST00000019803
16.0322 -10.48 1.30153e-05 251 14 4 52 [+] picture button
Mrpl51_predicted ENSRNOT00000025970 39S ribosomal protein L51, mitochondrial precursor (L51mt) (MRP-L51). [Source:Uniprot/SWISSPROT;Acc:Q22438]39S ribosomal protein L51, mitochondrial precursor (L51mt) (MRP-L51). [Source:Uniprot/SWISSPROT;Acc:Q22438] BY ORTHOLOGY TO:T12G3.5.2
15.9185 -17.26 1.63735e-05 113 6 3 16 [+] picture button
ST7 ENSRNOT00000010219 suppression of tumorigenicity 7 isoform a [Source:RefSeq_peptide;Acc:NP_001004102]
19.1021 -21.19 1.75177e-05 257 12 11 46 [+] picture button
Prrx1 ENSRNOT00000004950 Paired mesoderm homeobox protein 1 (PRX-1) (Paired-related homeobox protein 1) (rHox). [Source:Uniprot/SWISSPROT;Acc:P63014]
16.8281 -13.1 1.75182e-05 310 12 4 19 [+] picture button
Eya3_predicted ENSRNOT00000014919 Eyes absent homolog 3 (EC 3.1.3.48). [Source:Uniprot/SWISSPROT;Acc:Q99504]Eyes absent homolog 3 (EC 3.1.3.48). [Source:Uniprot/SWISSPROT;Acc:Q99504] BY ORTHOLOGY TO:ENST00000373871
16.2827 -20.16 2.57041e-05 700 18 4 29 [+] picture button
Cd2 ENSRNOT00000021268 T-cell surface antigen CD2 precursor (T-cell surface antigen T11/Leu- 5) (LFA-2) (LFA-3 receptor) (OX-34 antigen). [Source:Uniprot/SWISSPROT;Acc:P08921]
16.8013 -15.09 2.59973e-05 700 18 2 25 [+] picture button
Iqcg ENSRNOT00000032518 IQ domain-containing protein G. [Source:Uniprot/SWISSPROT;Acc:Q5PQQ6]
16.3864 -12.33 2.63333e-05 700 14 2 20 [+] picture button
Nnat ENSRNOT00000034117 Neuronatin. [Source:Uniprot/SWISSPROT;Acc:Q62649]
18.7514 -24.32 3.46114e-05 501 20 5 34 [+] picture button
Hrasls5 ENSRNOT00000032123 HRAS-like suppressor family, member 5 [Source:RefSeq_peptide;Acc:NP_001034096]
17.3966 -23.12 3.46714e-05 119 3 5 9 [+] picture button
Pdzd4_predicted ENSRNOT00000056376 PDZ domain-containing protein 4 (PDZ domain-containing RING finger protein 4-like protein). [Source:Uniprot/SWISSPROT;Acc:Q76G19]PDZ domain-containing protein 4 (PDZ domain-containing RING finger protein 4-like protein). [Source:Uniprot/SWISSPROT;Acc:Q76G19] BY ORTHOLOGY TO:ENSMMUT00000004774
18.9262 -25.19 3.85923e-05 520 16 6 36 [+] picture button
Csrp1 ENSRNOT00000011991 Cysteine and glycine-rich protein 1 (Cysteine-rich protein 1) (CRP1) (CRP). [Source:Uniprot/SWISSPROT;Acc:P47875]
16.5074 -24.17 4.63762e-05 1059 10 2 11 [+] picture button
1200013a08rik ENSRNOT00000026250 matrix-remodelling associated 8 [Source:RefSeq_peptide;Acc:NP_001007003]
16.3397 -19.73 6.05366e-05 765 10 3 16 [+] picture button
Exosc2_predicted ENSRNOT00000012312 Rrp4 CG3931-PA [Source:RefSeq_peptide;Acc:NP_611807]Rrp4 CG3931-PA [Source:RefSeq_peptide;Acc:NP_611807] BY ORTHOLOGY TO:CG3931-RA
15.9019 -20.14 6.32434e-05 1008 12 2 19 [+] picture button
Aanat ENSRNOT00000015221 Serotonin N-acetyltransferase (EC 2.3.1.87) (Aralkylamine N- acetyltransferase) (AA-NAT) (Serotonin acetylase). [Source:Uniprot/SWISSPROT;Acc:Q64666]
15.872 -17.95 8.84673e-05 578 20 4 32 [+] picture button
Mrpl3_predicted ENSRNOT00000017280 Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3). [Source:Uniprot/SWISSPROT;Acc:P18665]
16.7413 -14.85 8.93736e-05 314 16 3 65 [+] picture button
Gpr98 ENSRNOT00000021912 G protein-coupled receptor 98 [Source:MarkerSymbol;Acc:MGI:1274784]
16.6247 -18.83 9.09948e-05 700 23 3 43 [+] picture button
Rspo4 ENSRNOT00000055446 R-spondin family, member 4 [Source:MarkerSymbol;Acc:MGI:1924467]
18.2028 -25.57 9.84954e-05 352 17 3 44 [+] picture button
RGD1561223_predicted ENSRNOT00000029602 gene model 467, (NCBI) [Source:MarkerSymbol;Acc:MGI:2685313]gene model 467, (NCBI) [Source:MarkerSymbol;Acc:MGI:2685313] BY ORTHOLOGY TO:ENSMUST00000096108
16.5939 -26.25 9.93926e-05 700 17 4 26 [+] picture button
Syn1 ENSRNOT00000014250 Synapsin-1 (Synapsin I). [Source:Uniprot/SWISSPROT;Acc:P09951]
17.4235 -20.16 0.000100815 700 18 4 18 [+] picture button
RGD1304982_predicted ENSRNOT00000006924 cDNA sequence BC026585 [Source:MarkerSymbol;Acc:MGI:2448516]cDNA sequence BC026585 [Source:MarkerSymbol;Acc:MGI:2448516] BY ORTHOLOGY TO:ENSMUST00000046743
18.1767 -25.39 0.000104871 496 18 2 41 [+] picture button
Slc26a3 ENSRNOT00000009473 Chloride anion exchanger (Protein DRA) (Down-regulated in adenoma) (Solute carrier family 26 member 3). [Source:Uniprot/SWISSPROT;Acc:Q924C9]
17.5784 -21.31 0.000112672 700 14 2 17 [+] picture button
C11orf8h ENSRNOT00000006458 putative C11orf8 homolog (human) (C11orf8h), mRNA [Source:RefSeq_dna;Acc:NM_198778]
16.4275 -20.25 0.000116015 700 16 5 25 [+] picture button
LOC680815 ENSRNOT00000051802 occludin/ELL domain containing 1 [Source:MarkerSymbol;Acc:MGI:1924340]occludin/ELL domain containing 1 [Source:MarkerSymbol;Acc:MGI:1924340] BY ORTHOLOGY TO:ENSMUST00000002469
16.1459 -18.31 0.000126115 108 4 6 12 [+] picture button
Gria4 ENSRNOT00000009542 Glutamate receptor 4 precursor (GluR-4) (GluR4) (GluR-D) (Glutamate receptor ionotropic, AMPA 4) (AMPA-selective glutamate receptor 4). [Source:Uniprot/SWISSPROT;Acc:P19493]
16.0866 -19.66 0.000131981 631 19 9 28 [+] picture button
RGD1311994_predicted ENSRNOT00000002995 ankyrin repeat domain 56 [Source:RefSeq_peptide;Acc:NP_001025041]ankyrin repeat domain 56 [Source:RefSeq_peptide;Acc:NP_001025041] BY ORTHOLOGY TO:ENSGALT00000037917
16.8652 -15.99 0.000134714 373 16 2 37 [+] picture button
Slc7a10 ENSRNOT00000015205 Asc-type amino acid transporter 1 (Asc-1) (D-serine transporter). [Source:Uniprot/SWISSPROT;Acc:P63116]
17.3966 -17.76 0.000141779 233 12 6 35 [+] picture button
Ltv1 ENSRNOT00000020453 LTV1 homolog [Source:RefSeq_peptide;Acc:NP_001014179]
15.9716 -19.79 0.000157106 700 15 4 22 [+] picture button
Gm1322 ENSRNOT00000058819 gene model 1322, (NCBI) [Source:MarkerSymbol;Acc:MGI:2686168]
18.3049 -25.25 0.000158631 700 16 3 23 [+] picture button
LOC316573 ENSRNOT00000022564 Similar to Dner protein. [Source:Uniprot/SPTREMBL;Acc:Q5U215]
17.0555 -16.2 0.00015983 335 15 7 39 [+] picture button
Slc38a1 ENSRNOT00000008138 solute carrier family 38, member 1 [Source:RefSeq_peptide;Acc:NP_620187]
16.7468 -15.04 0.000163619 430 16 5 32 [+] picture button
Slc31a2 ENSRNOT00000019379 solute carrier family 31, member 2 [Source:RefSeq_peptide;Acc:NP_001028865]
16.6976 -20.07 0.000171004 700 20 4 33 [+] picture button
RGD1310951_predicted ENSRNOT00000022680 Uncharacterized protein KIAA1958. [Source:Uniprot/SWISSPROT;Acc:Q8N8K9]Uncharacterized protein KIAA1958. [Source:Uniprot/SWISSPROT;Acc:Q8N8K9] BY ORTHOLOGY TO:ENSXETT00000004750
16.5914 -22.96 0.000172849 700 16 6 28 [+] picture button
Pxk ENSRNOT00000044321 PX domain-containing protein kinase-like protein (Modulator of Na,K- ATPase) (MONaKA). [Source:Uniprot/SWISSPROT;Acc:Q4FZZ1]
16.5939 -20.97 0.000187822 700 16 4 32 [+] picture button
Iiig9 ENSRNOT00000028003 Uncharacterized protein C11orf66 homolog (Protein IIIG9). [Source:Uniprot/SWISSPROT;Acc:Q66HR9]
16.487 -16.65 0.000192741 97 4 6 10 [+] picture button
Grb7 ENSRNOT00000009299 growth factor receptor bound protein 7 [Source:RefSeq_peptide;Acc:NP_445855]
16.1824 -17.49 0.000208112 364 17 6 52 [+] picture button
Cfdp1 ENSRNOT00000026249 Craniofacial development protein 1 (Bucentaur). [Source:Uniprot/SWISSPROT;Acc:Q75UQ2]
18.0788 -21.07 0.000208504 202 9 8 28 [+] picture button
Eif3s7 ENSRNOT00000029753 eukaryotic translation initiation factor 3 subunit 7 [Source:RefSeq_peptide;Acc:NP_001004283]
17.0555 -18.39 0.000212322 109 4 3 15 [+] picture button
Rasa2 ENSRNOT00000016327 Ras GTPase-activating protein 2 (GAP1m). [Source:Uniprot/SWISSPROT;Acc:Q63713]
15.9402 -16.2 0.000213596 1363 12 3 14 [+] picture button
LOC679439 ENSRNOT00000049557 CDNA FLJ43363 fis, clone NT2RP7017474. [Source:Uniprot/SPTREMBL;Acc:Q6ZUS6]CDNA FLJ43363 fis, clone NT2RP7017474. [Source:Uniprot/SPTREMBL;Acc:Q6ZUS6] BY ORTHOLOGY TO:ENSOANT00000010670
16.8013 -22.31 0.00022241 700 23 5 38 [+] picture button
Dncl2a ENSRNOT00000035673 Dynein light chain roadblock-type 1 (Dynein light chain 2A, cytoplasmic) (Dynein-associated protein Km23) (Bithoraxoid-like protein) (BLP) (robl/LC7-like protein). [Source:Uniprot/SWISSPROT;Acc:P62628]
16.0027 -17.54 0.000225342 700 15 6 29 [+] picture button
Cyb5d2 ENSRNOT00000036942 cytochrome b5 domain containing 2 [Source:RefSeq_peptide;Acc:NP_001007672]
16.4664 -25.6 0.000225671 464 19 3 43 [+] picture button
Foxi2 ENSRNOT00000025569 Forkhead box protein I2 (Hepatocyte nuclear factor 3 forkhead homolog 5) (HFH-5) (Fragment). [Source:Uniprot/SWISSPROT;Acc:Q63248]
16.3343 -21.36 0.000236048 700 13 3 17 [+] picture button
Tbx19_predicted ENSRNOT00000004053 T-box 19 [Source:MarkerSymbol;Acc:MGI:1891158]T-box 19 [Source:MarkerSymbol;Acc:MGI:1891158] BY ORTHOLOGY TO:ENSMUST00000027859
16.2827 -20.35 0.000236201 700 17 2 26 [+] picture button
Q38PG1_RAT ENSRNOT00000027322 AHNAK 1 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q38PG1]
16.5213 -19.22 0.000244424 700 21 4 32 [+] picture button
Mbtps2 ENSRNOT00000033010 membrane-bound transcription factor protease, site 2 [Source:RefSeq_peptide;Acc:NP_001030179]
17.1107 -18.81 0.000257853 439 16 2 37 [+] picture button
Mrpl18_predicted ENSRNOT00000020064 39S ribosomal protein L18, mitochondrial precursor (L18mt) (MRP-L18). [Source:Uniprot/SWISSPROT;Acc:Q9H0U6]39S ribosomal protein L18, mitochondrial precursor (L18mt) (MRP-L18). [Source:Uniprot/SWISSPROT;Acc:Q9H0U6] BY ORTHOLOGY TO:ENSGALT00000018992
16.6007 -15 0.000258154 314 13 3 38 [+] picture button
INP5E_RAT ENSRNOT00000025818 72 kDa inositol polyphosphate 5-phosphatase (EC 3.1.3.36) (Phosphatidylinositol-4,5-bisphosphate 5-phosphatase) (Phosphatidylinositol polyphosphate 5-phosphatase type IV) (5- phosphatase that induces arborization) (Pharbin). [Source:Uniprot/SWISSPROT;Acc:Q9WVR1]
16.2607 -14.05 0.000285989 802 16 3 24 [+] picture button

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Download table: GFF TXT
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