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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-27a*

677 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Clec4f ENSRNOT00000017643 C-type lectin domain family 4 member F (C-type lectin superfamily member 13) (C-type lectin 13) (Kupffer cell receptor). [Source:Uniprot/SWISSPROT;Acc:P10716]
17.7377 -18.25 0.000116452 184 8 2 22 [+] picture button
Trh ENSRNOT00000015944 Thyroliberin precursor [Contains: Prothyroliberin; Thyroliberin (Thyrotropin-releasing hormone) (TRH) (Thyrotropin-releasing factor) (TRF) (TSH-releasing factor) (Protirelin)]. [Source:Uniprot/SWISSPROT;Acc:P01150]
16.6139 -15.9 0.000217391 454 18 4 38 [+] picture button
Nob1p ENSRNOT00000034386 RNA-binding protein NOB1. [Source:Uniprot/SWISSPROT;Acc:Q6VEU1]
16.487 -22.99 0.000231554 288 16 4 50 [+] picture button
Svs7_predicted ENSRNOT00000060454 seminal vesicle secretory protein 7 [Source:MarkerSymbol;Acc:MGI:1930790]seminal vesicle secretory protein 7 [Source:MarkerSymbol;Acc:MGI:1930790] BY ORTHOLOGY TO:ENSMUST00000034610
18.5336 -19.75 0.000323022 237 13 2 25 [+] picture button
Lrrc8d ENSRNOT00000002888 Leucine-rich repeat-containing protein 8D. [Source:Uniprot/SWISSPROT;Acc:Q5U308]
19.7788 -23.72 0.000342899 396 17 7 41 [+] picture button
Map3k1 ENSRNOT00000017968 Mitogen-activated protein kinase kinase kinase 1 (EC 2.7.11.25) (MAPK/ERK kinase kinase 1) (MEK kinase 1) (MEKK 1). [Source:Uniprot/SWISSPROT;Acc:Q62925]
16.2596 -19.17 0.000346119 183 10 6 32 [+] picture button
LOC681658 ENSRNOT00000001928 Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP) (CDP2) (Fragment). [Source:Uniprot/SWISSPROT;Acc:P53565]
16.0697 -18.61 0.000378251 686 17 8 30 [+] picture button
NP_001007724.1 ENSRNOT00000022430 5'-nucleotidase, cytosolic III-like [Source:RefSeq_peptide;Acc:NP_001007724]
16.7144 -22.38 0.000392214 230 12 5 34 [+] picture button
Hddc3_predicted ENSRNOT00000016445 HD domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q8N4P3]HD domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q8N4P3] BY ORTHOLOGY TO:ENSMMUT00000007200
18.0664 -27.7 0.000460975 319 15 7 51 [+] picture button
LOC246187 ENSRNOT00000027200 Metalloproteinase (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8CIV0]
17.1292 -23.86 0.00049753 564 17 2 27 [+] picture button
RGD1561995_predicted ENSRNOT00000032077 Cytosolic carboxypeptidase 3 (EC 3.4.17.-) (ATP/GTP-binding protein- like 3). [Source:Uniprot/SWISSPROT;Acc:Q8NEM8]Cytosolic carboxypeptidase 3 (EC 3.4.17.-) (ATP/GTP-binding protein- like 3). [Source:Uniprot/SWISSPROT;Acc:Q8NEM8] BY ORTHOLOGY TO:ENSXETT00000043668
17.0555 -16.96 0.000576408 110 5 1 10 [+] picture button
LOC360619 ENSRNOT00000047520 Gasdermin. [Source:Uniprot/SWISSPROT;Acc:Q96QA5]Gasdermin. [Source:Uniprot/SWISSPROT;Acc:Q96QA5] BY ORTHOLOGY TO:ENSMMUT00000028662
17.3874 -22.17 0.000583845 700 11 3 15 [+] picture button
Agc1 ENSRNOT00000051985 aggrecan 1 [Source:RefSeq_peptide;Acc:NP_071526]
18.1925 -24.57 0.000597116 62 1 5 8 [+] picture button
Snx12_predicted ENSRNOT00000005385 Sorting nexin-12. [Source:Uniprot/SWISSPROT;Acc:Q9UMY4]Sorting nexin-12. [Source:Uniprot/SWISSPROT;Acc:Q9UMY4] BY ORTHOLOGY TO:ENSMODT00000006382
17.9743 -28.42 0.000663033 700 16 2 27 [+] picture button
Tex264 ENSRNOT00000018122 putative secreted protein ZSIG11 [Source:RefSeq_peptide;Acc:NP_001007666]
16.7144 -14.15 0.000718542 280 17 4 49 [+] picture button
Nudc ENSRNOT00000009933 Nuclear migration protein nudC (Nuclear distribution protein C homolog) (c15). [Source:Uniprot/SWISSPROT;Acc:Q63525]
17.624 -25.97 0.000718542 204 12 5 40 [+] picture button
Olfml2a_predicted ENSRNOT00000018853 olfactomedin-like 2A [Source:RefSeq_peptide;Acc:NP_872293]olfactomedin-like 2A [Source:RefSeq_peptide;Acc:NP_872293] BY ORTHOLOGY TO:SINFRUT00000173935
18.0458 -29.54 0.000728292 700 25 3 39 [+] picture button
Pycrl ENSRNOT00000056517 pyrroline-5-carboxylate reductase-like [Source:RefSeq_peptide;Acc:NP_001011993]
16.7842 -21.18 0.000755429 578 22 2 45 [+] picture button
Zfyve26_predicted ENSRNOT00000002625 NOT ANNOTATED
16.6585 -20.47 0.000788373 700 9 1 10 [+] picture button
LOC306079 ENSRNOT00000040851 ribosomal protein L14 [Source:RefSeq_peptide;Acc:NP_001041344]
17.2601 -24.47 0.000822471 700 8 1 11 [+] picture button
Pllp ENSRNOT00000022277 Plasmolipin (Plasma membrane proteolipid). [Source:Uniprot/SWISSPROT;Acc:P47987]
17.2894 -24.6 0.00086475 712 16 6 21 [+] picture button
Rilp_predicted ENSRNOT00000005039 Rab-interacting lysosomal protein. [Source:Uniprot/SWISSPROT;Acc:Q96NA2]Rab-interacting lysosomal protein. [Source:Uniprot/SWISSPROT;Acc:Q96NA2] BY ORTHOLOGY TO:ENST00000382118
17.2032 -17.88 0.000892623 380 15 5 29 [+] picture button
Nat5 ENSRNOT00000014046 N-acetyltransferase 5 (ARD1 homolog, S. cerevisiae) [Source:MarkerSymbol;Acc:MGI:1915127]
16.7172 -20.74 0.00089369 424 17 7 37 [+] picture button
RGD1304842_predicted ENSRNOT00000010723 Uncharacterized protein C3orf29 precursor (HCV NS5A-transactivated protein 4 splice variant A-binding protein 1) (NS5ATP4ABP1). [Source:Uniprot/SWISSPROT;Acc:Q8NCE2]Uncharacterized protein C3orf29 precursor (HCV NS5A-transactivated protein 4 splice variant A-binding protein 1) (NS5ATP4ABP1). [Source:Uniprot/SWISSPROT;Acc:Q8NCE2] BY ORTHOLOGY TO:ENSMMUT00000010937
16.7669 -26.93 0.000916373 597 18 7 33 [+] picture button
Olr323_predicted ENSRNOT00000028601 olfactory receptor Olr323 [Source:RefSeq_peptide;Acc:NP_001000245]
18.2532 -24.59 0.000970109 700 13 2 23 [+] picture button
Myod1 ENSRNOT00000015109 Myoblast determination protein 1. [Source:Uniprot/SWISSPROT;Acc:Q02346]
17.0548 -23.47 0.00101396 781 13 5 19 [+] picture button
G6pc3 ENSRNOT00000028375 glucose 6 phosphatase, catalytic, 3 [Source:RefSeq_peptide;Acc:NP_788266]
19.8981 -25.78 0.00134622 283 11 5 34 [+] picture button
Cxcr6 ENSRNOT00000008294 chemokine (C-X-C motif) receptor 6 [Source:MarkerSymbol;Acc:MGI:1934582]
16.6363 -23.28 0.00151642 700 16 5 26 [+] picture button
LOC691209 ENSRNOT00000007144 Brain-specific K-Cl cotransporter KCC3a isoform (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6T7Y2]
16.3169 -23.64 0.0015384 700 14 7 21 [+] picture button
RGD1306106 ENSRNOT00000003359 RRP15-like protein. [Source:Uniprot/SWISSPROT;Acc:Q5M947]
16.4856 -14.34 0.00174955 319 16 3 46 [+] picture button
Atp7b ENSRNOT00000018320 Copper-transporting ATPase 2 (EC 3.6.3.4) (Copper pump 2) (Wilson disease-associated protein homolog) (Pineal night-specific ATPase). [Source:Uniprot/SWISSPROT;Acc:Q64535]
17.0104 -28.92 0.00179899 412 15 1 26 [+] picture button
Lrfn2 ENSRNOT00000015705 SALM1. [Source:Uniprot/SPTREMBL;Acc:Q460M5]
17.7424 -28.76 0.00180744 375 17 7 41 [+] picture button
Noc4l ENSRNOT00000056725 Nucleolar complex protein 4 homolog (NOC4 protein homolog) (NOC4-like protein) (Nucleolar complex-associated protein 4-like protein). [Source:Uniprot/SWISSPROT;Acc:Q5I0I8]
17.8514 -24.84 0.00188197 162 9 3 35 [+] picture button
Hars2_predicted ENSRNOT00000012510 Probable D-tyrosyl-tRNA(Tyr) deacylase 1 (EC 3.1.-.-). [Source:Uniprot/SWISSPROT;Acc:Q2T9V8]Probable D-tyrosyl-tRNA(Tyr) deacylase 1 (EC 3.1.-.-). [Source:Uniprot/SWISSPROT;Acc:Q2T9V8] BY ORTHOLOGY TO:ENSBTAT00000011800
18.6473 -22.02 0.00190008 170 6 4 13 [+] picture button
LOC500909 ENSRNOT00000056048 Coiled-coil domain-containing protein 134 precursor. [Source:Uniprot/SWISSPROT;Acc:Q5M862]
16.2024 -26.35 0.0020326 684 19 5 28 [+] picture button
LOC685348 ENSRNOT00000059938 NOT ANNOTATED
16.0475 -16.33 0.00212029 1101 12 1 9 [+] picture button
Gsg1 ENSRNOT00000011295 germ cell associated 1 [Source:RefSeq_peptide;Acc:NP_001013184]
19.4433 -26.77 0.00214079 259 13 3 32 [+] picture button
RGD1563812_predicted ENSRNOT00000042547 basic transcription factor 3 (Btf3), mRNA [Source:RefSeq_dna;Acc:NM_001008309]
16.6007 -14.84 0.00218409 303 13 1 30 [+] picture button
RGD1564126_predicted ENSRNOT00000022864 basic transcription factor 3 [Source:RefSeq_peptide;Acc:NP_001008310]
16.6007 -14.84 0.00218409 262 12 2 35 [+] picture button
Osr1_predicted ENSRNOT00000005666 odd-skipped related 1 (Drosophila) [Source:MarkerSymbol;Acc:MGI:1344424]odd-skipped related 1 (Drosophila) [Source:MarkerSymbol;Acc:MGI:1344424] BY ORTHOLOGY TO:ENSMUST00000057021
16.6007 -23.08 0.00227791 280 16 7 49 [+] picture button
Mpp7 ENSRNOT00000058914 membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) [Source:MarkerSymbol;Acc:MGI:1922989]
16.0945 -22.47 0.00236587 700 14 2 20 [+] picture button
RGD1564353_predicted ENSRNOT00000040039 Nucleoporin-62 C-terminal-like protein. [Source:Uniprot/SWISSPROT;Acc:Q9H1M0]Nucleoporin-62 C-terminal-like protein. [Source:Uniprot/SWISSPROT;Acc:Q9H1M0] BY ORTHOLOGY TO:ENSMMUT00000017819
16.5939 -18.81 0.00238581 700 11 1 13 [+] picture button
MIB2_RAT ENSRNOT00000023696 E3 ubiquitin-protein ligase MIB2 (EC 6.3.2.-) (Mind bomb homolog 2) (RBSC-skeletrophin/dystrophin-like polypeptide). [Source:Uniprot/SWISSPROT;Acc:Q68LP1]
17.3439 -25.87 0.00238875 700 11 2 18 [+] picture button
LOC686988 ENSRNOT00000003901 Discoidin domain-containing receptor 2 precursor (EC 2.7.10.1) (Discoidin domain receptor 2) (Receptor protein-tyrosine kinase TKT) (Tyrosine-protein kinase TYRO 10) (Neurotrophic tyrosine kinase, receptor-related 3) (CD167b antigen). [Source:Uniprot/SWISSPROT;Acc:Q16832]Discoidin domain-containing receptor 2 precursor (EC 2.7.10.1) (Discoidin domain receptor 2) (Receptor protein-tyrosine kinase TKT) (Tyrosine-protein kinase TYRO 10) (Neurotrophic tyrosine kinase, receptor-related 3) (CD167b antigen). [Source:Uniprot/SWISSPROT;Acc:Q16832] BY ORTHOLOGY TO:ENSOANT00000015968
17.3966 -22.55 0.00243322 112 6 4 18 [+] picture button
Ggn ENSRNOT00000039804 Gametogenetin. [Source:Uniprot/SWISSPROT;Acc:Q66HC8]
16.5939 -20.67 0.00245418 700 10 1 11 [+] picture button
Cotl1_predicted ENSRNOT00000021954 Coactosin-like protein. [Source:Uniprot/SWISSPROT;Acc:Q14019]Coactosin-like protein. [Source:Uniprot/SWISSPROT;Acc:Q14019] BY ORTHOLOGY TO:ENSORLT00000019349
16.2907 -23.95 0.00259876 947 19 3 22 [+] picture button
RGD1562346_predicted ENSRNOT00000028770 Histone H2B type 1-J (H2B.r) (H2B/r) (H2B.1). [Source:Uniprot/SWISSPROT;Acc:P06899]Histone H2B type 1-J (H2B.r) (H2B/r) (H2B.1). [Source:Uniprot/SWISSPROT;Acc:P06899] BY ORTHOLOGY TO:ENSMMUT00000013441
16.1294 -19.05 0.0027101 700 16 2 20 [+] picture button
Dlgap2 ENSRNOT00000057845 Disks large-associated protein 2 (DAP-2) (SAP90/PSD-95-associated protein 2) (SAPAP2) (PSD-95/SAP90-binding protein 2). [Source:Uniprot/SWISSPROT;Acc:P97837]
16.7144 -22.8 0.00271751 276 10 1 21 [+] picture button
Rcbtb2 ENSRNOT00000020836 RCC1 and BTB domain-containing protein 2 (Regulator of chromosome condensation and BTB domain-containing protein 2) (Chromosome condensation 1-like). [Source:Uniprot/SWISSPROT;Acc:Q6P798]
16.2596 -14.41 0.00276006 80 3 2 9 [+] picture button
Pik3c2a_predicted ENSRNOT00000055120 Phosphatidylinositol-4-phosphate 3-kinase C2 domain-containing alpha polypeptide (EC 2.7.1.154) (Phosphoinositide 3-Kinase-C2-alpha) (PtdIns-3-kinase C2 alpha) (PI3K-C2alpha). [Source:Uniprot/SWISSPROT;Acc:O00443]Phosphatidylinositol-4-phosphate 3-kinase C2 domain-containing alpha polypeptide (EC 2.7.1.154) (Phosphoinositide 3-Kinase-C2-alpha) (PtdIns-3-kinase C2 alpha) (PI3K-C2alpha). [Source:Uniprot/SWISSPROT;Acc:O00443] BY ORTHOLOGY TO:ENST00000265970
16.2267 -18.59 0.00279204 500 17 5 25 [+] picture button

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Download table: GFF TXT
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