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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-26a

972 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Slc25a16 ENSRNOT00000029564 Grave disease carrier protein (GDC) (Mitochondrial solute carrier protein homolog) (Solute carrier family 25 member 16) (Fragment). [Source:Uniprot/SWISSPROT;Acc:P16261]
15.8991 -12.31 0.00000000529501 700 11 6 15 [+] picture button
Ube2a ENSRNOT00000061455 ubiquitin-conjugating enzyme E2A, RAD6 homolog [Source:RefSeq_peptide;Acc:NP_001013955]
16.2827 -27.07 0.00000000687135 700 14 8 25 [+] picture button
Hgf ENSRNOT00000009763 Hepatocyte growth factor precursor (Scatter factor) (SF) (Hepatopoeitin-A) [Contains: Hepatocyte growth factor alpha chain; Hepatocyte growth factor beta chain]. [Source:Uniprot/SWISSPROT;Acc:P17945]
16.3733 -12.98 0.00000000876872 157 9 7 30 [+] picture button
Tfcp2l4_predicted ENSRNOT00000047406 Grainyhead-like protein 3 homolog (Sister of mammalian grainyhead) (Transcription factor CP2-like 4). [Source:Uniprot/SWISSPROT;Acc:Q8TE85]Grainyhead-like protein 3 homolog (Sister of mammalian grainyhead) (Transcription factor CP2-like 4). [Source:Uniprot/SWISSPROT;Acc:Q8TE85] BY ORTHOLOGY TO:ENSORLT00000018096
16.7921 -16.22 0.0000000149059 700 16 3 24 [+] picture button
Rps6ka6_predicted ENSRNOT00000040001 ribosomal protein S6 kinase polypeptide 6 [Source:MarkerSymbol;Acc:MGI:1914321]ribosomal protein S6 kinase polypeptide 6 [Source:MarkerSymbol;Acc:MGI:1914321] BY ORTHOLOGY TO:ENSMUST00000082034
16.6259 -18.4 0.0000000354704 700 16 9 20 [+] picture button
9930021J17Rik ENSRNOT00000043089 RIKEN cDNA 9930021J17 gene [Source:MarkerSymbol;Acc:MGI:2444746]
16.0322 -14.56 0.0000000427941 213 15 6 47 [+] picture button
Tnrc6a ENSRNOT00000017885 trinucleotide repeat containing 6a [Source:MarkerSymbol;Acc:MGI:2385292]
17.0442 -12.86 0.0000000506713 700 22 12 37 [+] picture button
RGD1559449_predicted ENSRNOT00000014431 Pseudokinase ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein) (STRAD beta) (ILP-interacting protein) (CALS-21). [Source:Uniprot/SWISSPROT;Acc:Q9C0K7]Pseudokinase ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein) (STRAD beta) (ILP-interacting protein) (CALS-21). [Source:Uniprot/SWISSPROT;Acc:Q9C0K7] BY ORTHOLOGY TO:SINFRUT00000162209
16.179 -14.19 0.000000068145 700 19 9 32 [+] picture button
LOC306805 ENSRNOT00000020704 similar to asporin precursor (LOC306805), mRNA [Source:RefSeq_dna;Acc:NM_001014008]
18.8747 -17.52 0.000000103013 197 9 5 19 [+] picture button
Zdhhc6 ENSRNOT00000054681 zinc finger, DHHC domain containing 6 [Source:MarkerSymbol;Acc:MGI:1914230]
16.857 -15.2 0.000000143455 700 18 10 32 [+] picture button
Smad1 ENSRNOT00000025079 Mothers against decapentaplegic homolog 1 (SMAD 1) (Mothers against DPP homolog 1). [Source:Uniprot/SWISSPROT;Acc:P97588]
15.5096 -16.01 0.000000195021 1242 5 8 4 [+] picture button
Sipa1 ENSRNOT00000054839 signal-induced proliferation-associated gene 1 [Source:RefSeq_peptide;Acc:NP_001004089]
15.8047 -22.7 0.000000306958 78 4 4 18 [+] picture button
Frmd4b ENSRNOT00000010717 Nitzin (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9Z259]
16.905 -16.07 0.000000738925 700 17 8 24 [+] picture button
Gpr151 ENSRNOT00000043544 Probable G-protein coupled receptor 151 (GPCR-2037). [Source:Uniprot/SWISSPROT;Acc:Q7TSN5]
15.5567 -8.32 0.00000115635 700 16 4 27 [+] picture button
Usp3 ENSRNOT00000057742 ubiquitin specific peptidase 3 [Source:MarkerSymbol;Acc:MGI:2152450]
15.7642 -11.24 0.00000122888 700 26 9 38 [+] picture button
Q8VI29_RAT ENSRNOT00000046700 Transient receptor potential channel 3-like protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8VI29]
16.7581 -14.41 0.00000169702 616 17 8 30 [+] picture button
RGD1565237_predicted ENSRNOT00000030102 Interleukin-17 receptor D precursor (IL-17 receptor D) (IL-17RD) (Interleukin-17D receptor) (IL-17D receptor) (IL17Rhom) (Interleukin- 17 receptor-like protein) (Sef homolog) (hSef). [Source:Uniprot/SWISSPROT;Acc:Q8NFM7]Interleukin-17 receptor D precursor (IL-17 receptor D) (IL-17RD) (Interleukin-17D receptor) (IL-17D receptor) (IL17Rhom) (Interleukin- 17 receptor-like protein) (Sef homolog) (hSef). [Source:Uniprot/SWISSPROT;Acc:Q8NFM7] BY ORTHOLOGY TO:ENSXETT00000001988
18.7718 -28.81 0.00000180145 700 18 2 25 [+] picture button
RGD1310722_predicted ENSRNOT00000007388 CDNA FLJ43968 fis, clone TESTI4017543, weakly similar to Homo sapiens ubinuclein 1 (UBN1). [Source:Uniprot/SPTREMBL;Acc:Q6ZU65]CDNA FLJ43968 fis, clone TESTI4017543, weakly similar to Homo sapiens ubinuclein 1 (UBN1). [Source:Uniprot/SPTREMBL;Acc:Q6ZU65] BY ORTHOLOGY TO:ENST00000288561
16.9418 -11.19 0.0000018397 296 16 8 47 [+] picture button
Rnf6_predicted ENSRNOT00000001282 RING finger protein 6 (RING-H2 protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y252]RING finger protein 6 (RING-H2 protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y252] BY ORTHOLOGY TO:ENSPTRT00000010539
17.624 -18.14 0.00000188441 303 13 8 50 [+] picture button
Acmsd ENSRNOT00000005206 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase (EC 4.1.1.45). [Source:Uniprot/SWISSPROT;Acc:Q8R5M5]
18.0458 -23.41 0.00000206323 700 17 6 22 [+] picture button
Hectd3 ENSRNOT00000024737 HECT domain containing 3 [Source:MarkerSymbol;Acc:MGI:1923858]
17.9226 -20.48 0.00000322768 700 11 6 14 [+] picture button
Hoxd3 ENSRNOT00000033511 homeo box D3 [Source:MarkerSymbol;Acc:MGI:96207]
15.7846 -15.95 0.00000395831 846 13 6 14 [+] picture button
Phtf2_predicted ENSRNOT00000018493 putative homeodomain transcription factor 2 [Source:RefSeq_peptide;Acc:NP_065165]putative homeodomain transcription factor 2 [Source:RefSeq_peptide;Acc:NP_065165] BY ORTHOLOGY TO:ENSMMUT00000012584
16.7856 -15.19 0.0000041434 700 20 8 38 [+] picture button
Slit2 ENSRNOT00000005477 Slit homolog 2 protein precursor (Slit-2) (Fragment). [Source:Uniprot/SWISSPROT;Acc:Q9WVC1]
16.7144 -15.75 0.0000045494 173 7 8 21 [+] picture button
Pter ENSRNOT00000023446 Phosphotriesterase-related protein (Parathion hydrolase-related protein) (Resiniferotoxin-binding phosphotriesterase-related protein). [Source:Uniprot/SWISSPROT;Acc:Q63530]
16.5575 -12.32 0.00000622271 867 13 7 16 [+] picture button
Tmem26_predicted ENSRNOT00000038095 Transmembrane protein 26. [Source:Uniprot/SWISSPROT;Acc:Q6ZUK4]Transmembrane protein 26. [Source:Uniprot/SWISSPROT;Acc:Q6ZUK4] BY ORTHOLOGY TO:ENSGALT00000004797
16.0222 -14.8 0.00000704916 700 11 3 16 [+] picture button
Cep152_predicted ENSRNOT00000031268 centrosomal protein 152 (predicted) (Cep152_predicted), mRNA [Source:RefSeq_dna;Acc:XR_009444]
16.9354 -15.09 0.00000738127 700 23 5 36 [+] picture button
LOC498331 ENSRNOT00000061162 Protein tyrosine phosphatase (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q99ND7]
17.5812 -16.96 0.00000744533 573 21 5 29 [+] picture button
Sfxn4_predicted ENSRNOT00000054674 Sideroflexin-4 (Breast cancer resistance marker 1). [Source:Uniprot/SWISSPROT;Acc:Q6P4A7]Sideroflexin-4 (Breast cancer resistance marker 1). [Source:Uniprot/SWISSPROT;Acc:Q6P4A7] BY ORTHOLOGY TO:ENSMMUT00000011593
19.8981 -22.69 0.00000765936 264 14 5 49 [+] picture button
Ndufs1 ENSRNOT00000015852 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3). [Source:Uniprot/SWISSPROT;Acc:Q66HF1]
16.5024 -12.6 0.00000785683 428 14 5 35 [+] picture button
Epha2_predicted ENSRNOT00000012328 Ephrin type-A receptor 2 precursor (EC 2.7.10.1) (Tyrosine-protein kinase receptor ECK) (Epithelial cell kinase). [Source:Uniprot/SWISSPROT;Acc:P29317]Ephrin type-A receptor 2 precursor (EC 2.7.10.1) (Tyrosine-protein kinase receptor ECK) (Epithelial cell kinase). [Source:Uniprot/SWISSPROT;Acc:P29317] BY ORTHOLOGY TO:ENST00000375634
16.7175 -14.98 0.00000846461 700 19 6 31 [+] picture button
RGD1566140_predicted ENSRNOT00000000676 K08E7.8a [Source:RefSeq_peptide;Acc:NP_001040969]K08E7.8a [Source:RefSeq_peptide;Acc:NP_001040969] BY ORTHOLOGY TO:K08E7.8a
16.2827 -21.19 0.00000893092 700 16 4 22 [+] picture button
Cdk8 ENSRNOT00000061105 cyclin-dependent kinase 8 [Source:MarkerSymbol;Acc:MGI:1196224]
17.2161 -14.93 0.00000943 700 18 2 29 [+] picture button
LOC688052 ENSRNOT00000036209 WD repeat protein 76. [Source:Uniprot/SWISSPROT;Acc:Q9H967]WD repeat protein 76. [Source:Uniprot/SWISSPROT;Acc:Q9H967] BY ORTHOLOGY TO:SINFRUT00000136646
17.5273 -13.59 0.0000126697 700 13 3 23 [+] picture button
RGD1307961_predicted ENSRNOT00000017283 CG5882-PA [Source:RefSeq_peptide;Acc:NP_651540]CG5882-PA [Source:RefSeq_peptide;Acc:NP_651540] BY ORTHOLOGY TO:CG5882-RA
15.7393 -12.87 0.0000129888 700 14 5 29 [+] picture button
Tusc3 ENSRNOT00000017452 tumor suppressor candidate 3 [Source:RefSeq_peptide;Acc:NP_001004212]
16.1459 -16.61 0.0000138063 260 10 4 23 [+] picture button
Mtx2 ENSRNOT00000002134 metaxin 2 [Source:RefSeq_peptide;Acc:NP_001008287]
19.4433 -20.34 0.0000150573 261 14 7 47 [+] picture button
RGD1562047_predicted ENSRNOT00000019234 Cyclin-dependent kinases regulatory subunit 2 (CKS-2). [Source:Uniprot/SWISSPROT;Acc:P33552]Cyclin-dependent kinases regulatory subunit 2 (CKS-2). [Source:Uniprot/SWISSPROT;Acc:P33552] BY ORTHOLOGY TO:ENSMODT00000017024
18.6473 -14.06 0.0000160625 271 14 7 40 [+] picture button
Acvr1c ENSRNOT00000059280 Activin receptor type 1C precursor (EC 2.7.11.30) (ACTR-IC) (Activin receptor-like kinase 7) (ALK-7). [Source:Uniprot/SWISSPROT;Acc:P70539]
16.312 -14.98 0.0000163833 700 10 7 16 [+] picture button
Chrna1 ENSRNOT00000024706 Acetylcholine receptor subunit alpha precursor. [Source:Uniprot/SWISSPROT;Acc:P25108]
16.5017 -18.97 0.0000188002 336 15 5 44 [+] picture button
LOC684447 ENSRNOT00000042662 similar to karyopherin (importin) alpha 6 (predicted) (LOC684447), mRNA [Source:RefSeq_dna;Acc:XR_008706]
17.8179 -16.49 0.0000192386 700 18 2 58 [+] picture button
Q3KR69_RAT ENSRNOT00000038600 Ttc13 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q3KR69]
15.8912 -10 0.000019472 735 21 7 28 [+] picture button
Col10a1 ENSRNOT00000000655 Collagen alpha-1(X) chain precursor. [Source:Uniprot/SWISSPROT;Acc:Q03692]Collagen alpha-1(X) chain precursor. [Source:Uniprot/SWISSPROT;Acc:Q03692] BY ORTHOLOGY TO:ENSMODT00000022642
15.9084 -9.9 0.0000212932 700 14 5 25 [+] picture button
Reep4 ENSRNOT00000015169 Receptor expression-enhancing protein 4. [Source:Uniprot/SWISSPROT;Acc:Q4QQW1]
16.9412 -17.06 0.0000249138 414 16 6 36 [+] picture button
Prpsap2 ENSRNOT00000049769 Phosphoribosyl pyrophosphate synthetase-associated protein 2 (PRPP synthetase-associated protein 2) (41 kDa phosphoribosypyrophosphate synthetase-associated protein) (PAP41). [Source:Uniprot/SWISSPROT;Acc:O08618]
16.2764 -16.39 0.0000298724 486 14 5 27 [+] picture button
Syt10 ENSRNOT00000019406 Synaptotagmin-10 (Synaptotagmin X) (SytX). [Source:Uniprot/SWISSPROT;Acc:O08625]
15.5567 -13.07 0.0000306871 700 20 3 26 [+] picture button
RGD1305486 ENSRNOT00000052131 Protein FAM98A. [Source:Uniprot/SWISSPROT;Acc:Q5FWT1]
15.3991 -11.36 0.0000315911 1069 14 8 17 [+] picture button
Ndufa12_predicted ENSRNOT00000010117 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase subunit B17.2) (Complex I-B17.2) (CI-B17.2) (CIB17.2) (13 kDa differentiation- associated protein). [Source:Uniprot/SWISSPROT;Acc:Q9UI09]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase subunit B17.2) (Complex I-B17.2) (CI-B17.2) (CIB17.2) (13 kDa differentiation- associated protein). [Source:Uniprot/SWISSPROT;Acc:Q9UI09] BY ORTHOLOGY TO:ENSOANT00000010558
15.9906 -13.49 0.0000337122 700 20 3 29 [+] picture button
LOC691155 ENSRNOT00000032159 T09B9.4 is orthologous to the human gene PUTATIVE CYTOSKELETAL PROTEIN (D10S170. OMIM:601985), which when mutated leads to disease. [Source: WormBase]T09B9.4 is orthologous to the human gene PUTATIVE CYTOSKELETAL PROTEIN (D10S170. OMIM:601985), which when mutated leads to disease. [Source: WormBase] BY ORTHOLOGY TO:T09B9.4.1
15.9716 -16.61 0.0000345261 700 14 6 19 [+] picture button
Tasp1_predicted ENSRNOT00000055630 taspase, threonine aspartase 1 [Source:RefSeq_peptide;Acc:NP_001037708]
16.5036 -17.64 0.000035077 918 13 7 20 [+] picture button

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Download table: GFF TXT
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