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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-25*

664 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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4930562C15Rik ENSRNOT00000061177 RIKEN cDNA 4930562C15 gene [Source:MarkerSymbol;Acc:MGI:1926059]
17.6495 -29.06 0.000001 700 24 1 17 [+] picture button
Mxd3 ENSRNOT00000021946 Max-interacting transcriptional repressor MAD3 (Max-associated protein 3) (MAX dimerization protein 3) (Myx). [Source:Uniprot/SWISSPROT;Acc:Q62912]
17.0555 -22.16 0.0000401142 297 16 6 70 [+] picture button
A3galt2 ENSRNOT00000007851 iGb3 synthase [Source:RefSeq_peptide;Acc:NP_612533]
15.8276 -18.86 0.000115032 814 15 2 18 [+] picture button
Ren1 ENSRNOT00000003951 Renin precursor (EC 3.4.23.15) (Angiotensinogenase). [Source:Uniprot/SWISSPROT;Acc:P08424]
18.4199 -24.14 0.000138034 190 7 4 23 [+] picture button
Parvb_predicted ENSRNOT00000015665 Beta-parvin (Affixin). [Source:Uniprot/SWISSPROT;Acc:Q9HBI1]Beta-parvin (Affixin). [Source:Uniprot/SWISSPROT;Acc:Q9HBI1] BY ORTHOLOGY TO:ENSGACT00000005125
15.518 -26.18 0.000150477 870 16 2 20 [+] picture button
LOC363675 ENSRNOT00000037531 similar to es 64 (LOC363675), mRNA [Source:RefSeq_dna;Acc:NM_001014229]
18.5336 -23.87 0.000388295 700 14 4 40 [+] picture button
Mia1 ENSRNOT00000002048 Melanoma-derived growth regulatory protein precursor (Melanoma inhibitory activity) (Cartilage-derived retinoic acid-sensitive protein) (CD-RAP). [Source:Uniprot/SWISSPROT;Acc:Q62946]
16.6162 -22.22 0.000559246 700 12 4 17 [+] picture button
LOC689524 ENSRNOT00000038285 WD repeat domain 64 [Source:RefSeq_peptide;Acc:NP_653226]WD repeat domain 64 [Source:RefSeq_peptide;Acc:NP_653226] BY ORTHOLOGY TO:ENST00000366552
16.8013 -23.68 0.000701266 700 20 3 26 [+] picture button
Kdelc1 ENSRNOT00000016080 NOT ANNOTATED
16.5939 -24.04 0.000701266 700 8 1 9 [+] picture button
Mxd4_predicted ENSRNOT00000020247 Max-interacting transcriptional repressor MAD4 (Max-associated protein 4) (MAX dimerization protein 4). [Source:Uniprot/SWISSPROT;Acc:Q14582]Max-interacting transcriptional repressor MAD4 (Max-associated protein 4) (MAX dimerization protein 4). [Source:Uniprot/SWISSPROT;Acc:Q14582] BY ORTHOLOGY TO:SINFRUT00000153473
16.3733 -27.96 0.000718032 241 13 5 38 [+] picture button
Tcfeb ENSRNOT00000020086 transcription factor EB [Source:RefSeq_peptide;Acc:NP_001020878]
17.1322 -25.31 0.000823939 700 14 1 16 [+] picture button
RGD1565360_predicted ENSRNOT00000002291 holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) [Source:MarkerSymbol;Acc:MGI:894646]holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) [Source:MarkerSymbol;Acc:MGI:894646] BY ORTHOLOGY TO:ENSMUST00000088945
16.6976 -23.47 0.000844473 700 23 2 36 [+] picture button
RGD1562747_predicted ENSRNOT00000056518 Protein CXorf40A (Endothelial-overexpressed lipopolysaccharide- associated factor 1). [Source:Uniprot/SWISSPROT;Acc:Q8TE69]Protein CXorf40A (Endothelial-overexpressed lipopolysaccharide- associated factor 1). [Source:Uniprot/SWISSPROT;Acc:Q8TE69] BY ORTHOLOGY TO:ENSGACT00000026467
16.7144 -20.92 0.000880177 246 13 3 50 [+] picture button
Adamts16_predicted ENSRNOT00000022790 ADAMTS-16 precursor (EC 3.4.24.-) (A disintegrin and metalloproteinase with thrombospondin motifs 16) (ADAM-TS 16) (ADAM-TS16). [Source:Uniprot/SWISSPROT;Acc:Q8TE57]ADAMTS-16 precursor (EC 3.4.24.-) (A disintegrin and metalloproteinase with thrombospondin motifs 16) (ADAM-TS 16) (ADAM-TS16). [Source:Uniprot/SWISSPROT;Acc:Q8TE57] BY ORTHOLOGY TO:ENSMODT00000001894
17.0393 -26.85 0.000964946 700 15 4 23 [+] picture button
Crb1_predicted ENSRNOT00000014774 NOT ANNOTATED
16.905 -23.06 0.00101629 700 7 1 6 [+] picture button
Rgs12 ENSRNOT00000058198 Regulator of G-protein signaling 12 (RGS12). [Source:Uniprot/SWISSPROT;Acc:O08774]
16.179 -25.9 0.00101629 700 10 1 9 [+] picture button
Nmt1 ENSRNOT00000004046 Glycylpeptide N-tetradecanoyltransferase 1 (EC 2.3.1.97) (Peptide N- myristoyltransferase 1) (Myristoyl-CoA:protein N-myristoyltransferase 1) (NMT 1) (Type I N-myristoyltransferase). [Source:Uniprot/SWISSPROT;Acc:Q8K1Q0]
16.9795 -24.51 0.00107755 700 20 2 28 [+] picture button
Spnb4 ENSRNOT00000028393 Spnb4 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5BJU8]
16.3436 -26.69 0.00108592 917 15 5 16 [+] picture button
Acin1 ENSRNOT00000018982 Apoptotic chromatin condensation inducer in the nucleus (Acinus). [Source:Uniprot/SWISSPROT;Acc:Q9UKV3]Apoptotic chromatin condensation inducer in the nucleus (Acinus). [Source:Uniprot/SWISSPROT;Acc:Q9UKV3] BY ORTHOLOGY TO:ENST00000262710
16.2293 -22.55 0.00112391 562 16 6 33 [+] picture button
Naga ENSRNOT00000056026 Alpha-N-acetylgalactosaminidase precursor (EC 3.2.1.49) (Alpha- galactosidase B). [Source:Uniprot/SWISSPROT;Acc:Q66H12]
16.7224 -26.49 0.00117957 700 14 1 20 [+] picture button
Pcsk2 ENSRNOT00000007249 Neuroendocrine convertase 2 precursor (EC 3.4.21.94) (NEC 2) (PC2) (Prohormone convertase 2) (Proprotein convertase 2) (KEX2-like endoprotease 2). [Source:Uniprot/SWISSPROT;Acc:P28841]
17.8514 -27.1 0.00131943 210 10 4 23 [+] picture button
Cilp_predicted ENSRNOT00000044887 Cartilage intermediate layer protein 1 precursor (CILP-1) (Cartilage intermediate-layer protein) [Contains: Cartilage intermediate layer protein 1 C1; Cartilage intermediate layer protein 1 C2]. [Source:Uniprot/SWISSPROT;Acc:O75339]Cartilage intermediate layer protein 1 precursor (CILP-1) (Cartilage intermediate-layer protein) [Contains: Cartilage intermediate layer protein 1 C1; Cartilage intermediate layer protein 1 C2]. [Source:Uniprot/SWISSPROT;Acc:O75339] BY ORTHOLOGY TO:ENSGACT00000020547
17.282 -23.14 0.00135421 700 14 7 20 [+] picture button
Pfkfb3 ENSRNOT00000025731 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 (6PF-2-K/Fru- 2,6-P2ASE brain-type isozyme) (RB2K) [Includes: 6-phosphofructo-2- kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)]. [Source:Uniprot/SWISSPROT;Acc:O35552]
16.3469 -28.82 0.00148613 700 16 3 25 [+] picture button
LOC685850 ENSRNOT00000051955 NOT ANNOTATED
16.8625 -25.16 0.00160921 700 13 1 12 [+] picture button
Ky_predicted ENSRNOT00000035723 kyphoscoliosis peptidase [Source:RefSeq_peptide;Acc:NP_848649]kyphoscoliosis peptidase [Source:RefSeq_peptide;Acc:NP_848649] BY ORTHOLOGY TO:ENSBTAT00000043993
16.1459 -24.5 0.00161326 282 16 5 51 [+] picture button
ENSRNOT00000059121 NOT ANNOTATED
16.1017 -23.59 0.00168437 700 9 1 11 [+] picture button
Nudt22 ENSRNOT00000028734 Nucleoside diphosphate-linked moiety X motif 22 (Nudix motif 22). [Source:Uniprot/SWISSPROT;Acc:Q6P9U1]
16.179 -22.5 0.00176361 700 23 5 33 [+] picture button
Ddx47 ENSRNOT00000011096 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Source:RefSeq_peptide;Acc:NP_001015005]
19.5932 -27.91 0.00197733 344 19 3 52 [+] picture button
Hcrtr1 ENSRNOT00000018674 Orexin receptor type 1 (Ox1r) (Hypocretin receptor type 1). [Source:Uniprot/SWISSPROT;Acc:P56718]
16.4382 -24.5 0.00199954 639 16 3 23 [+] picture button
LOC688313 ENSRNOT00000054943 Tether containing UBX domain for GLUT4 (Alveolar soft part sarcoma chromosome region candidate 1) (Alveolar soft part sarcoma locus) (Renal papillary cell carcinoma protein 17). [Source:Uniprot/SWISSPROT;Acc:Q9BZE9]Tether containing UBX domain for GLUT4 (Alveolar soft part sarcoma chromosome region candidate 1) (Alveolar soft part sarcoma locus) (Renal papillary cell carcinoma protein 17). [Source:Uniprot/SWISSPROT;Acc:Q9BZE9] BY ORTHOLOGY TO:ENSMODT00000003986
16.179 -23.25 0.00200202 700 18 2 25 [+] picture button
LOC246120 ENSRNOT00000001872 LAMA-like protein 2 precursor. [Source:Uniprot/SWISSPROT;Acc:Q4QQW8]
16.1196 -18.56 0.0020198 415 18 3 43 [+] picture button
Fbxl16 ENSRNOT00000039777 F-box/LRR-repeat protein 16 (F-box and leucine-rich repeat protein 16) (Spinal cord injury and regeneration-related protein 1). [Source:Uniprot/SWISSPROT;Acc:Q5MJ12]
16.5939 -22.02 0.00211572 700 22 6 30 [+] picture button
Nob1p ENSRNOT00000034386 RNA-binding protein NOB1. [Source:Uniprot/SWISSPROT;Acc:Q6VEU1]
16.1459 -20.04 0.00212285 288 16 4 50 [+] picture button
Dnajc15_predicted ENSRNOT00000012530 DnaJ homolog subfamily C member 15 (Methylation-controlled J protein) (MCJ) (Cell growth-inhibiting gene 22 protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y5T4]DnaJ homolog subfamily C member 15 (Methylation-controlled J protein) (MCJ) (Cell growth-inhibiting gene 22 protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y5T4] BY ORTHOLOGY TO:ENSMMUT00000019226
16.187 -19 0.00217061 425 21 3 43 [+] picture button
Aldoc ENSRNOT00000046388 Fructose-bisphosphate aldolase C (EC 4.1.2.13) (Brain-type aldolase). [Source:Uniprot/SWISSPROT;Acc:P09117]
15.7371 -22.41 0.00221846 377 13 1 17 [+] picture button
Acin1 ENSRNOT00000046144 NOT ANNOTATED
15.8386 -22.55 0.00222892 700 14 1 20 [+] picture button
RGD1308014_predicted ENSRNOT00000005715 Integrator complex subunit 7 (Int7). [Source:Uniprot/SWISSPROT;Acc:Q9NVH2]Integrator complex subunit 7 (Int7). [Source:Uniprot/SWISSPROT;Acc:Q9NVH2] BY ORTHOLOGY TO:ENSXETT00000031516
17.2287 -20.96 0.00224382 700 20 4 42 [+] picture button
Ccdc43 ENSRNOT00000048526 Coiled-coil domain-containing protein 43. [Source:Uniprot/SWISSPROT;Acc:Q5BK07]
15.9261 -25.67 0.00230493 700 11 1 17 [+] picture button
RGD1562784_predicted ENSRNOT00000041062 Seipin (Bernardinelli-Seip congenital lipodystrophy type 2 protein). [Source:Uniprot/SWISSPROT;Acc:Q96G97]Seipin (Bernardinelli-Seip congenital lipodystrophy type 2 protein). [Source:Uniprot/SWISSPROT;Acc:Q96G97] BY ORTHOLOGY TO:ENSMODT00000010073
15.8177 -18.87 0.00231372 700 11 1 24 [+] picture button
Aldoc ENSRNOT00000015535 Fructose-bisphosphate aldolase C (EC 4.1.2.13) (Brain-type aldolase). [Source:Uniprot/SWISSPROT;Acc:P09117]
15.705 -22.41 0.00234607 384 15 3 24 [+] picture button
Gpr43 ENSRNOT00000028532 Free fatty acid receptor 2 (G-protein coupled receptor 43). [Source:Uniprot/SWISSPROT;Acc:Q76EI6]
17.5841 -25.52 0.00236632 700 16 4 24 [+] picture button
ENSMUSG00000074924 ENSRNOT00000061520 predicted gene, ENSMUSG00000074924 [Source:MarkerSymbol;Acc:MGI:3641846]
15.8679 -28.47 0.00253564 700 19 2 22 [+] picture button
Adcy10 ENSRNOT00000004326 soluble adenylyl cyclase [Source:RefSeq_peptide;Acc:NP_067716]
15.7642 -21.41 0.00253564 700 9 1 12 [+] picture button
Trim46_predicted ENSRNOT00000056713 NOT ANNOTATED
16.905 -25.09 0.00253564 700 13 1 13 [+] picture button
RGD1562784_predicted ENSRNOT00000026416 NOT ANNOTATED
15.7566 -18.87 0.00257206 700 13 1 23 [+] picture button
NP_001012073.1 ENSRNOT00000058786 novel nuclear protein 1 [Source:RefSeq_peptide;Acc:NP_001012073]
16.9835 -30.16 0.00266589 418 13 5 31 [+] picture button
Crocc_predicted ENSRNOT00000011114 Rootletin (Ciliary rootlet coiled-coil protein). [Source:Uniprot/SWISSPROT;Acc:Q5TZA2]Rootletin (Ciliary rootlet coiled-coil protein). [Source:Uniprot/SWISSPROT;Acc:Q5TZA2] BY ORTHOLOGY TO:ENSXETT00000029410
16.0753 -21.5 0.00277102 700 23 5 43 [+] picture button
Htra3_predicted ENSRNOT00000010852 Probable serine protease HTRA3 precursor (EC 3.4.21.-) (High- temperature requirement factor A3) (Pregnancy-related serine protease). [Source:Uniprot/SWISSPROT;Acc:P83110]Probable serine protease HTRA3 precursor (EC 3.4.21.-) (High- temperature requirement factor A3) (Pregnancy-related serine protease). [Source:Uniprot/SWISSPROT;Acc:P83110] BY ORTHOLOGY TO:ENSCAFT00000023096
16.0601 -18.56 0.00277595 379 16 4 43 [+] picture button
Tle2 ENSRNOT00000008310 transducin-like enhancer of split 2 homolog [Source:RefSeq_peptide;Acc:NP_001034102]
15.9182 -21.74 0.00278712 700 14 3 22 [+] picture button
Tle2 ENSRNOT00000040760 transducin-like enhancer of split 2 homolog [Source:RefSeq_peptide;Acc:NP_001034102]
15.9182 -21.74 0.00278712 700 12 1 12 [+] picture button

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Download table: GFF TXT
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