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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-24

839 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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LOC691209 ENSRNOT00000007144 Brain-specific K-Cl cotransporter KCC3a isoform (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6T7Y2]
20.0584 -32.62 3.74519e-08 700 14 7 21 [+] picture button
BC039210 ENSRNOT00000018671 cDNA sequence BC039210 [Source:MarkerSymbol;Acc:MGI:3603204]
16.905 -26.5 1.53038e-07 700 24 9 48 [+] picture button
Gba2 ENSRNOT00000022002 Non-lysosomal glucosylceramidase (EC 3.2.1.45) (NLGase) (Glucosylceramidase 2) (Beta-glucocerebrosidase 2) (Beta-glucosidase 2). [Source:Uniprot/SWISSPROT;Acc:Q5M868]
19.4433 -25.67 1.88977e-07 282 16 8 40 [+] picture button
Eif2ak4_predicted ENSRNOT00000009222 Eukaryotic translation initiation factor 2-alpha kinase 4 (EC 2.7.11.1) (GCN2-like protein). [Source:Uniprot/SWISSPROT;Acc:Q9P2K8]Eukaryotic translation initiation factor 2-alpha kinase 4 (EC 2.7.11.1) (GCN2-like protein). [Source:Uniprot/SWISSPROT;Acc:Q9P2K8] BY ORTHOLOGY TO:ENSGALT00000015663
17.5103 -21.32 4.29875e-07 181 9 6 36 [+] picture button
Whsc1 ENSRNOT00000021952 Wolf-Hirschhorn syndrome candidate 1 (human) [Source:MarkerSymbol;Acc:MGI:1276574]
16.2827 -21.97 5.22747e-07 700 17 5 31 [+] picture button
ENSRNOT00000049765 NOT ANNOTATED
16.733 -31.78 1e-06 1405 20 1 3 [+] picture button
ENSRNOT00000036249 NOT ANNOTATED
17.3198 -27.31 1e-06 700 13 1 19 [+] picture button
Ubtf ENSRNOT00000028422 Nucleolar transcription factor 1 (Upstream-binding factor 1) (UBF-1). [Source:Uniprot/SWISSPROT;Acc:P25977]
15.9651 -18.83 1.27462e-06 700 21 6 32 [+] picture button
RGD1305422_predicted ENSRNOT00000046530 Homolog of Homo sapiens "PREDICTED "KIAA0226 gene product [Source:IPI;Acc:IPI00022496]"Homolog of Homo sapiens "PREDICTED "KIAA0226 gene product [Source:IPI;Acc:IPI00022496]" BY ORTHOLOGY TO:SINFRUT00000163195
16.6976 -20.91 1.28027e-06 700 15 4 23 [+] picture button
Lrfn2 ENSRNOT00000015705 SALM1. [Source:Uniprot/SPTREMBL;Acc:Q460M5]
16.9661 -16.99 1.55745e-06 375 17 7 41 [+] picture button
Edg1 ENSRNOT00000018318 Sphingosine 1-phosphate receptor Edg-1 (Sphingosine 1-phosphate receptor 1) (S1P1). [Source:Uniprot/SWISSPROT;Acc:P48303]
16.2265 -22.75 1.64077e-06 1193 15 8 24 [+] picture button
Clcn3 ENSRNOT00000014845 Chloride channel protein 3 (ClC-3). [Source:Uniprot/SWISSPROT;Acc:P51792]
17.0169 -24.86 2.22745e-06 700 21 8 30 [+] picture button
Pigt_predicted ENSRNOT00000019761 GPI transamidase component PIG-T precursor (Phosphatidylinositol- glycan biosynthesis class T protein). [Source:Uniprot/SWISSPROT;Acc:Q969N2]GPI transamidase component PIG-T precursor (Phosphatidylinositol- glycan biosynthesis class T protein). [Source:Uniprot/SWISSPROT;Acc:Q969N2] BY ORTHOLOGY TO:ENSGACT00000009219
16.6733 -18.65 2.53052e-06 367 21 5 64 [+] picture button
Suv420h2_predicted ENSRNOT00000023744 Histone-lysine N-methyltransferase SUV420H2 (EC 2.1.1.43) (Suppressor of variegation 4-20 homolog 2) (Suv4-20h2) (Su(var)4-20 homolog 2). [Source:Uniprot/SWISSPROT;Acc:P0C2N6]
17.0442 -25.54 2.58279e-06 647 21 8 33 [+] picture button
RGD1359201 ENSRNOT00000003131 RGD1359201 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5HZX2]
16.737 -21.89 3.28618e-06 906 20 5 24 [+] picture button
Eml3 ENSRNOT00000026938 echinoderm microtubule associated protein like 3 [Source:MarkerSymbol;Acc:MGI:2387612]
17.2829 -26.23 3.36763e-06 240 14 7 50 [+] picture button
RGD1309655 ENSRNOT00000019380 Coiled-coil domain-containing protein 45. [Source:Uniprot/SWISSPROT;Acc:Q5XI03]
16.0993 -20.42 4.136e-06 700 12 6 24 [+] picture button
RGD1565561_predicted ENSRNOT00000036978 Membrane-bound O-acyltransferase domain-containing protein 1 (EC 2.3.-.-) (O-acyltransferase domain-containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q6ZNC8]Membrane-bound O-acyltransferase domain-containing protein 1 (EC 2.3.-.-) (O-acyltransferase domain-containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q6ZNC8] BY ORTHOLOGY TO:ENSMODT00000014424
18.1768 -28.1 5.16163e-06 700 17 6 23 [+] picture button
Rpo1-4 ENSRNOT00000013587 DNA-directed RNA polymerase I subunit RPA1 (EC 2.7.7.6) (DNA-directed RNA polymerase I largest subunit) (RNA polymerase I 194 kDa subunit) (RPA194) (A194). [Source:Uniprot/SWISSPROT;Acc:O54889]
17.053 -25.37 5.31022e-06 814 17 4 21 [+] picture button
Tcf2 ENSRNOT00000003507 transcription factor 2 [Source:MarkerSymbol;Acc:MGI:98505]
18.8755 -29.85 7.213e-06 700 19 7 30 [+] picture button
Ncln ENSRNOT00000007110 Nicalin precursor (Nicastrin-like protein). [Source:Uniprot/SWISSPROT;Acc:Q5XIA1]
16.5177 -26.52 7.33228e-06 1118 14 4 19 [+] picture button
RGD1307753_predicted ENSRNOT00000037453 podocan-like 1 [Source:RefSeq_peptide;Acc:NP_079101]podocan-like 1 [Source:RefSeq_peptide;Acc:NP_079101] BY ORTHOLOGY TO:ENSMMUT00000011641
16.179 -23.04 7.58776e-06 700 19 4 24 [+] picture button
Sdccag33_predicted ENSRNOT00000021750 similar to teashirt family zinc finger 1 (LOC682217), mRNA [Source:RefSeq_dna;Acc:XR_007840]
16.2208 -20.84 7.58893e-06 700 20 10 29 [+] picture button
Ppp2r2d ENSRNOT00000023139 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform (PP2A, subunit B, B-delta isoform) (PP2A, subunit B, B55-delta isoform) (PP2A, subunit B, PR55-delta isoform) (PP2A, subunit B, R2-delta isoform). [Source:Uniprot/SWISSPROT;Acc:P56932]
16.0945 -14.97 8.56553e-06 700 17 5 29 [+] picture button
Psap ENSRNOT00000000696 Sulfated glycoprotein 1 precursor (SGP-1) (Prosaposin). [Source:Uniprot/SWISSPROT;Acc:P10960]
16.0644 -17.3 8.59655e-06 485 17 2 31 [+] picture button
Surf2 ENSRNOT00000006889 surfeit 2 [Source:RefSeq_peptide;Acc:NP_001029038]
16.7198 -17.07 9.49034e-06 380 16 8 46 [+] picture button
Anks1_predicted ENSRNOT00000059373 Ankyrin repeat and SAM domain-containing protein 1A (Odin). [Source:Uniprot/SWISSPROT;Acc:Q92625]Ankyrin repeat and SAM domain-containing protein 1A (Odin). [Source:Uniprot/SWISSPROT;Acc:Q92625] BY ORTHOLOGY TO:ENSMMUT00000030560
17.0087 -23.33 9.9288e-06 700 20 3 33 [+] picture button
Mcrs1 ENSRNOT00000050487 Microspherule protein 1. [Source:Uniprot/SPTREMBL;Acc:Q5BJR5]
16.0322 -15.94 1.00946e-05 311 16 5 45 [+] picture button
Csk ENSRNOT00000026358 Tyrosine-protein kinase CSK (EC 2.7.10.2) (C-SRC kinase). [Source:Uniprot/SWISSPROT;Acc:P32577]
17.7447 -31.46 1.06571e-05 679 19 7 31 [+] picture button
Traf3ip1 ENSRNOT00000056612 TNF receptor-associated factor 3 interacting protein 1 [Source:RefSeq_peptide;Acc:NP_001012204]
16.8281 -18.88 1.27421e-05 173 7 4 30 [+] picture button
Plekhj1 ENSRNOT00000026155 pleckstrin homology domain containing, family J member 1 [Source:RefSeq_peptide;Acc:NP_060519]pleckstrin homology domain containing, family J member 1 [Source:RefSeq_peptide;Acc:NP_060519] BY ORTHOLOGY TO:ENSMMUT00000014112
17.9651 -21.31 1.49692e-05 284 18 6 57 [+] picture button
Enc1 ENSRNOT00000022144 ectodermal-neural cortex 1 [Source:RefSeq_peptide;Acc:NP_001003401]
15.9283 -23.26 1.57435e-05 544 18 3 31 [+] picture button
KLC1_RAT ENSRNOT00000040617 Kinesin light chain 1 (KLC 1). [Source:Uniprot/SWISSPROT;Acc:P37285]
17.7347 -29.35 1.99913e-05 700 16 3 34 [+] picture button
Rab4b ENSRNOT00000002052 Ras-related protein Rab-4B. [Source:Uniprot/SWISSPROT;Acc:P51146]
15.956 -17.72 2.01332e-05 402 17 7 40 [+] picture button
Plcl2_predicted ENSRNOT00000018146 phospholipase C-like 2 [Source:RefSeq_peptide;Acc:NP_055999]phospholipase C-like 2 [Source:RefSeq_peptide;Acc:NP_055999] BY ORTHOLOGY TO:SINFRUT00000175433
16.4901 -29.52 2.69914e-05 700 22 8 38 [+] picture button
Aars ENSRNOT00000025052 Aars protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q4G057]
18.626 -23.67 2.88815e-05 356 15 5 43 [+] picture button
Ccdc58_predicted ENSRNOT00000042208 Coiled-coil domain-containing protein 58. [Source:Uniprot/SWISSPROT;Acc:Q4VC31]Coiled-coil domain-containing protein 58. [Source:Uniprot/SWISSPROT;Acc:Q4VC31] BY ORTHOLOGY TO:ENSMODT00000023221
16.487 -21.29 3.03654e-05 218 8 7 21 [+] picture button
EGFL7_RAT ENSRNOT00000026318 EGF-like domain-containing protein 7 precursor (Multiple EGF-like domain protein 7) (Multiple epidermal growth factor-like domain protein 7). [Source:Uniprot/SWISSPROT;Acc:Q6AZ60]
16.1144 -22.83 3.06252e-05 612 18 3 31 [+] picture button
Degs2 ENSRNOT00000015855 degenerative spermatocyte homolog 2 (Drosophila), lipid desaturase [Source:RefSeq_peptide;Acc:NP_001017457]
16.6007 -22.07 3.45769e-05 246 16 3 39 [+] picture button
Grwd1 ENSRNOT00000028594 Glutamate-rich WD repeat-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q5XI13]
16.4901 -20.5 3.70078e-05 700 21 2 35 [+] picture button
Hip1r ENSRNOT00000001461 Huntingtin interacting protein 1 related (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q99PW9]
16.209 -20.46 4.5943e-05 1059 12 4 17 [+] picture button
LOC294513 ENSRNOT00000044805 DnaJ (Hsp40) homolog, subfamily B, member 12 [Source:RefSeq_peptide;Acc:NP_001013929]
16.4931 -31.23 4.61386e-05 1720 2 1 5 [+] picture button
Gtf2b ENSRNOT00000015032 Transcription initiation factor IIB (General transcription factor TFIIB) (RNA polymerase II alpha initiation factor). [Source:Uniprot/SWISSPROT;Acc:P62916]
16.2596 -19.71 4.88101e-05 266 15 7 41 [+] picture button
Csnk1d ENSRNOT00000015178 Casein kinase I isoform delta (EC 2.7.11.1) (CKI-delta). [Source:Uniprot/SWISSPROT;Acc:Q06486]
17.5103 -21.71 4.91994e-05 204 10 4 23 [+] picture button
Hddc3_predicted ENSRNOT00000016445 HD domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q8N4P3]HD domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q8N4P3] BY ORTHOLOGY TO:ENSMMUT00000007200
18.1793 -14.44 5.2361e-05 319 15 7 51 [+] picture button
Trim54 ENSRNOT00000008113 tripartite motif-containing 54 [Source:MarkerSymbol;Acc:MGI:1889623]
17.0087 -27.35 5.31073e-05 700 21 7 34 [+] picture button
Ldb1_predicted ENSRNOT00000025025 LIM domain-binding protein 1 (Carboxyl-terminal LIM domain-binding protein 2) (CLIM-2) (LIM domain-binding factor CLIM2). [Source:Uniprot/SWISSPROT;Acc:Q86U70]LIM domain-binding protein 1 (Carboxyl-terminal LIM domain-binding protein 2) (CLIM-2) (LIM domain-binding factor CLIM2). [Source:Uniprot/SWISSPROT;Acc:Q86U70] BY ORTHOLOGY TO:ENSGACT00000009725
16.0896 -24.5 5.53743e-05 519 14 8 31 [+] picture button
Lamb3 ENSRNOT00000008440 Laminin chain (Fragment). [Source:Uniprot/SPTREMBL;Acc:P70637]
16.6262 -26.52 5.54797e-05 700 19 4 29 [+] picture button
RGD1307244_predicted ENSRNOT00000034816 mitochondrial glutamate carrier, putativemitochondrial glutamate carrier, putative BY ORTHOLOGY TO:AAEL004124-RA
16.1462 -21.93 5.65431e-05 700 17 2 20 [+] picture button
Dusp16_predicted ENSRNOT00000009151 Dual specificity protein phosphatase 16 (EC 3.1.3.48) (EC 3.1.3.16) (Mitogen-activated protein kinase phosphatase 7) (MAP kinase phosphatase 7) (MKP-7). [Source:Uniprot/SWISSPROT;Acc:Q9BY84]Dual specificity protein phosphatase 16 (EC 3.1.3.48) (EC 3.1.3.16) (Mitogen-activated protein kinase phosphatase 7) (MAP kinase phosphatase 7) (MKP-7). [Source:Uniprot/SWISSPROT;Acc:Q9BY84] BY ORTHOLOGY TO:ENSMODT00000023138
16.263 -22.37 5.69534e-05 700 17 6 25 [+] picture button

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Download table: GFF TXT
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