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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-22*

720 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Atp5f1 ENSRNOT00000021920 ATP synthase B chain, mitochondrial precursor (EC 3.6.3.14). [Source:Uniprot/SWISSPROT;Acc:P19511]
17.8514 -17.63 1.9908e-05 288 12 3 34 [+] picture button
RRMJ3_RAT ENSRNOT00000013295 Putative rRNA methyltransferase 3 (EC 2.1.1.-) (rRNA (uridine-2'-O-)- methyltransferase 3). [Source:Uniprot/SWISSPROT;Acc:Q5RJT2]
17.4956 -15.47 4.24843e-05 320 17 3 60 [+] picture button
Dhrs7b ENSRNOT00000007116 dehydrogenase/reductase (SDR family) member 7B [Source:RefSeq_peptide;Acc:NP_001008507]
16.7505 -15.1 6.00603e-05 700 18 3 25 [+] picture button
Rsn ENSRNOT00000001683 restin [Source:RefSeq_peptide;Acc:NP_113933]
16.4732 -15.06 0.000115994 449 17 6 36 [+] picture button
RGD1306576_predicted ENSRNOT00000049032 CG9422-PC, isoform C [Source:RefSeq_peptide;Acc:NP_610227]CG9422-PC, isoform C [Source:RefSeq_peptide;Acc:NP_610227] BY ORTHOLOGY TO:CG9422-RA
18.4199 -19.14 0.000213018 213 10 3 31 [+] picture button
RGD1308696 ENSRNOT00000006708 hypothetical protein LOC450034 [Source:RefSeq_peptide;Acc:NP_001006055]hypothetical protein LOC450034 [Source:RefSeq_peptide;Acc:NP_001006055] BY ORTHOLOGY TO:ENSDART00000075438
16.352 -20.04 0.000301887 700 17 3 19 [+] picture button
C1galt1 ENSRNOT00000010375 Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 (EC 2.4.1.122) (Core 1 beta1,3-galactosyltransferase 1) (Core1 UDP- galactose:N-acetylgalactosamine-alpha-R beta 1,3-galactosyltransferase 1) (Core 1 beta3-Gal-T) (C1GalT1) (Core 1 O-glycan [Source:Uniprot/SWISSPROT;Acc:Q9JJ05]
17.7377 -21.43 0.000340499 159 8 5 41 [+] picture button
Prss25 ENSRNOT00000037333 Serine protease HTRA2, mitochondrial precursor (EC 3.4.21.108) (High temperature requirement protein A2) (HtrA2) (Omi stress-regulated endoprotease) (Serine proteinase OMI) (Serine protease 25). [Source:Uniprot/SWISSPROT;Acc:O43464]Serine protease HTRA2, mitochondrial precursor (EC 3.4.21.108) (High temperature requirement protein A2) (HtrA2) (Omi stress-regulated endoprotease) (Serine proteinase OMI) (Serine protease 25). [Source:Uniprot/SWISSPROT;Acc:O43464] BY ORTHOLOGY TO:ENSMODT00000006056
18.4199 -17.21 0.000342234 181 8 7 25 [+] picture button
Nmt2 ENSRNOT00000030219 N-myristoyltransferase 2 [Source:RefSeq_peptide;Acc:NP_997473]
16.1512 -14.72 0.000466955 700 19 1 19 [+] picture button
Kcnn4 ENSRNOT00000057684 Intermediate conductance calcium-activated potassium channel protein 4 (SK4) (KCa4) (IK1). [Source:Uniprot/SWISSPROT;Acc:Q9QYW1]
16.3046 -17.94 0.00047385 700 15 1 25 [+] picture button
Jph3_predicted ENSRNOT00000025392 Junctophilin-3 (Junctophilin type 3) (JP-3). [Source:Uniprot/SWISSPROT;Acc:Q8WXH2]Junctophilin-3 (Junctophilin type 3) (JP-3). [Source:Uniprot/SWISSPROT;Acc:Q8WXH2] BY ORTHOLOGY TO:ENSMMUT00000032185
16.7921 -17.24 0.000487498 700 19 4 27 [+] picture button
Nol9 ENSRNOT00000013535 Nol9 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q4G021]
18.8031 -22.78 0.000549005 808 19 2 21 [+] picture button
LOC690691 ENSRNOT00000059507 similar to putative pheromone receptor (Go-VN4) (LOC690691), mRNA [Source:RefSeq_dna;Acc:XR_006928]
17.1045 -17.21 0.000597354 700 11 1 17 [+] picture button
4930431L04Rik ENSRNOT00000040424 RIKEN cDNA 4930431L04 gene [Source:MarkerSymbol;Acc:MGI:1921140]
16.3864 -18.11 0.000709162 700 12 2 20 [+] picture button
2310061C15Rik ENSRNOT00000014997 RIKEN cDNA 2310061C15 gene [Source:MarkerSymbol;Acc:MGI:1913781]
17.2367 -18.36 0.000776968 700 14 4 27 [+] picture button
RGD1310262_predicted ENSRNOT00000007519 RIKEN cDNA 2210011C24 gene [Source:MarkerSymbol;Acc:MGI:1917384]RIKEN cDNA 2210011C24 gene [Source:MarkerSymbol;Acc:MGI:1917384] BY ORTHOLOGY TO:ENSMUST00000056686
16.5939 -19.12 0.000832627 700 17 4 27 [+] picture button
Q8CJ97_RAT ENSRNOT00000014762 Sodium channel associated protein 2 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8CJ97]
17.1692 -13.71 0.000851223 159 7 3 19 [+] picture button
Mrpl18_predicted ENSRNOT00000020064 39S ribosomal protein L18, mitochondrial precursor (L18mt) (MRP-L18). [Source:Uniprot/SWISSPROT;Acc:Q9H0U6]39S ribosomal protein L18, mitochondrial precursor (L18mt) (MRP-L18). [Source:Uniprot/SWISSPROT;Acc:Q9H0U6] BY ORTHOLOGY TO:ENSGALT00000018992
17.2829 -16.92 0.000935919 314 13 3 38 [+] picture button
Il2ra ENSRNOT00000045861 interleukin 2 receptor, alpha chain [Source:MarkerSymbol;Acc:MGI:96549]
17.3635 -19.74 0.00100134 700 13 1 16 [+] picture button
RGD1565779_predicted ENSRNOT00000060583 Riken cDNA E230025N22 gene [Source:MarkerSymbol;Acc:MGI:3687212]Riken cDNA E230025N22 gene [Source:MarkerSymbol;Acc:MGI:3687212] BY ORTHOLOGY TO:ENSMUST00000052890
18.5336 -18.08 0.00105628 246 14 2 39 [+] picture button
Arhgef2 ENSRNOT00000027182 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:RefSeq_peptide;Acc:NP_001012079]
17.0381 -21.81 0.00122428 1149 10 5 10 [+] picture button
LOC500152 ENSRNOT00000030320 PREDICTED: Bos taurus similar to multimerin 1 (LOC516574), mRNA. [Source:RefSeq_dna;Acc:XR_028285]PREDICTED: Bos taurus similar to multimerin 1 (LOC516574), mRNA. [Source:RefSeq_dna;Acc:XR_028285] BY ORTHOLOGY TO:ENSBTAT00000013581
17.3198 -20.27 0.0013933 700 17 2 27 [+] picture button
Zfr ENSRNOT00000016196 Zfr protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q562A2]
16.7723 -16.53 0.00141527 1305 14 6 19 [+] picture button
RGD1564842_predicted ENSRNOT00000010413 pleckstrin homology, Sec7 and coiled/coil domains 4 [Source:RefSeq_peptide;Acc:NP_001030398]pleckstrin homology, Sec7 and coiled/coil domains 4 [Source:RefSeq_peptide;Acc:NP_001030398] BY ORTHOLOGY TO:ENSBTAT00000030432
19.4433 -22.95 0.00156219 200 11 3 32 [+] picture button
MGC94555 ENSRNOT00000013329 intimal thickness-related receptor [Source:RefSeq_peptide;Acc:NP_001006995]
16.8417 -13.49 0.0016061 479 18 6 36 [+] picture button
RGD1565379_predicted ENSRNOT00000058768 NOT ANNOTATED
17.5922 -16.3 0.00160671 405 14 1 24 [+] picture button
Plcd3 ENSRNOT00000047383 phospholipase C, delta 3 [Source:MarkerSymbol;Acc:MGI:107451]
16.2827 -16.39 0.00171418 700 13 3 20 [+] picture button
Slc35b2 ENSRNOT00000026988 solute carrier family 35, member B2 [Source:RefSeq_peptide;Acc:NP_954542]
17.1211 -15.23 0.0017609 326 17 2 49 [+] picture button
Stra6 ENSRNOT00000011074 stimulated by retinoic acid gene 6 homolog [Source:RefSeq_peptide;Acc:NP_001025095]
16.9506 -20.38 0.00179813 652 19 3 31 [+] picture button
LOC298062 ENSRNOT00000009987 plasticity-related protein 3 [Source:RefSeq_peptide;Acc:NP_958428]
17.8212 -19.36 0.00186519 700 18 8 28 [+] picture button
Pzp ENSRNOT00000009467 Alpha-1-macroglobulin precursor (Alpha-1-M) [Contains: Alpha-1- macroglobulin 165 kDa subunit; Alpha-1-macroglobulin 45 kDa subunit]. [Source:Uniprot/SWISSPROT;Acc:Q63041]
16.9418 -16.05 0.00188913 104 4 2 7 [+] picture button
ENSRNOT00000057696 Myosin-Ia (Brush border myosin I) (BBM-I) (BBMI) (Myosin I heavy chain) (MIHC). [Source:Uniprot/SWISSPROT;Acc:Q9UBC5]Myosin-Ia (Brush border myosin I) (BBM-I) (BBMI) (Myosin I heavy chain) (MIHC). [Source:Uniprot/SWISSPROT;Acc:Q9UBC5] BY ORTHOLOGY TO:ENST00000379401
17.2161 -18.26 0.00192616 700 14 2 23 [+] picture button
Spcs1 ENSRNOT00000024447 signal peptidase complex subunit 1 homolog (S. cerevisiae) [Source:MarkerSymbol;Acc:MGI:1916269]
18.4199 -22.51 0.00194728 263 13 5 42 [+] picture button
Olr745_predicted ENSRNOT00000050785 olfactory receptor Olr745 [Source:RefSeq_peptide;Acc:NP_001000578]
16.4901 -12.56 0.00197213 700 7 1 10 [+] picture button
Cd3g ENSRNOT00000021390 T-cell surface glycoprotein CD3 gamma chain precursor (T-cell receptor T3 gamma chain). [Source:Uniprot/SWISSPROT;Acc:Q64159]
16.8281 -15.28 0.00198458 143 8 2 23 [+] picture button
Zfp142 ENSRNOT00000034187 zinc finger protein 142 [Source:MarkerSymbol;Acc:MGI:1924514]
17.4905 -20.63 0.00204548 469 15 7 31 [+] picture button
Dhodh ENSRNOT00000020302 Dihydroorotate dehydrogenase, mitochondrial precursor (EC 1.3.3.1) (Dihydroorotate oxidase) (DHOdehase). [Source:Uniprot/SWISSPROT;Acc:Q63707]
19.7844 -23.7 0.00209851 293 13 6 36 [+] picture button
Gtf2h2_predicted ENSRNOT00000024615 general transcription factor II H, polypeptide 2 [Source:RefSeq_peptide;Acc:NP_001070896]
16.7225 -14.3 0.00213978 700 13 2 23 [+] picture button
Med28_predicted ENSRNOT00000004912 Mediator of RNA polymerase II transcription subunit 28 (Mediator complex subunit 28) (Med23 homolog). [Source:Uniprot/SWISSPROT;Acc:P68943]
17.2829 -14.68 0.00224196 252 14 3 51 [+] picture button
Nudt9 ENSRNOT00000002973 ADP-ribose pyrophosphatase, mitochondrial precursor (EC 3.6.1.13) (ADP-ribose diphosphatase) (Adenosine diphosphoribose pyrophosphatase) (ADPR-PPase) (ADP-ribose phosphohydrolase) (Nucleoside diphosphate- linked moiety X motif 9) (Nudix motif 9). [Source:Uniprot/SWISSPROT;Acc:Q5XIG0]
16.2596 -15.25 0.00225186 247 11 5 34 [+] picture button
Alg9_predicted ENSRNOT00000029137 hypothetical protein LOC393598 [Source:RefSeq_peptide;Acc:NP_956919]hypothetical protein LOC393598 [Source:RefSeq_peptide;Acc:NP_956919] BY ORTHOLOGY TO:ENSDART00000005090
18.6007 -28.63 0.00226251 651 14 3 26 [+] picture button
Rgs19 ENSRNOT00000022451 Regulator of G-protein signaling 19 (RGS19) (G-alpha-interacting protein) (GAIP). [Source:Uniprot/SWISSPROT;Acc:O70521]
18.2144 -17.18 0.0022631 350 15 3 29 [+] picture button
RGD1564655_predicted ENSRNOT00000059172 Amino-terminal enhancer of split (Amino enhancer of split) (GRG protein) (Protein ESP1) (Gp130-associated protein GAM). [Source:Uniprot/SWISSPROT;Acc:Q08117]Amino-terminal enhancer of split (Amino enhancer of split) (GRG protein) (Protein ESP1) (Gp130-associated protein GAM). [Source:Uniprot/SWISSPROT;Acc:Q08117] BY ORTHOLOGY TO:ENSBTAT00000032296
18.7738 -23.59 0.00233176 700 13 3 20 [+] picture button
LOC686566 ENSRNOT00000038519 Grainyhead-like protein 1 homolog (Transcription factor CP2-like 2) (Transcription factor LBP-32) (NH32) (Mammalian grainyhead). [Source:Uniprot/SWISSPROT;Acc:Q9NZI5]Grainyhead-like protein 1 homolog (Transcription factor CP2-like 2) (Transcription factor LBP-32) (NH32) (Mammalian grainyhead). [Source:Uniprot/SWISSPROT;Acc:Q9NZI5] BY ORTHOLOGY TO:ENSPTRT00000021702
17.5899 -17.33 0.00236272 700 17 4 31 [+] picture button
Q8K1P7_RAT ENSRNOT00000013165 Brahma-related protein 1 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8K1P7]
17.3966 -16.94 0.00237755 106 6 7 25 [+] picture button
Pik3r4_predicted ENSRNOT00000018654 Phosphoinositide 3-kinase regulatory subunit 4 (EC 2.7.11.1) (PI3- kinase regulatory subunit 4). [Source:Uniprot/SWISSPROT;Acc:P0C0R5]
17.2161 -20.92 0.00245076 700 20 3 27 [+] picture button
P97674_RAT ENSRNOT00000039827 Zinc finger protein 18 (Fragment). [Source:Uniprot/SPTREMBL;Acc:P97674]
16.8281 -17.99 0.00251476 209 10 1 12 [+] picture button
Ccnb2 ENSRNOT00000017117 cyclin B2 [Source:RefSeq_peptide;Acc:NP_001009470]
16.487 -17.19 0.00251476 217 9 1 15 [+] picture button
LOC680528 ENSRNOT00000060861 gene model 813, (NCBI) [Source:MarkerSymbol;Acc:MGI:2685659]gene model 813, (NCBI) [Source:MarkerSymbol;Acc:MGI:2685659] BY ORTHOLOGY TO:ENSMUST00000099663
16.9534 -21.19 0.00256516 700 14 2 20 [+] picture button
LOC499240 ENSRNOT00000055158 similar to predicted gene ICRFP703B1614Q5.5 (LOC499240), mRNA [Source:RefSeq_dna;Acc:NM_001024287]
16.3518 -17.01 0.00258932 503 15 1 22 [+] picture button

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Download table: GFF TXT
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