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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-21*

792 hits found.


Page 1 of 16
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Zfp2 ENSRNOT00000040346 zinc finger protein 2 [Source:MarkerSymbol;Acc:MGI:99167]zinc finger protein 2 [Source:MarkerSymbol;Acc:MGI:99167] BY ORTHOLOGY TO:ENSMUST00000077686
16.3864 -19.7 0.0000580289 700 12 2 17 [+] picture button
Mybpc2_predicted ENSRNOT00000026590 Myosin-binding protein C, fast-type (Fast MyBP-C) (C-protein, skeletal muscle fast isoform). [Source:Uniprot/SWISSPROT;Acc:Q14324]Myosin-binding protein C, fast-type (Fast MyBP-C) (C-protein, skeletal muscle fast isoform). [Source:Uniprot/SWISSPROT;Acc:Q14324] BY ORTHOLOGY TO:ENSXETT00000007358
16.6976 -20.52 0.0000925827 700 16 2 20 [+] picture button
Ap2a1_predicted ENSRNOT00000020304 The apt-4 gene encodes an adaptin: specifically, it encodes an ortholog of the alpha subunit of adaptor protein complex 2 (AP-2). [Source: WormBase]The apt-4 gene encodes an adaptin: specifically, it encodes an ortholog of the alpha subunit of adaptor protein complex 2 (AP-2). [Source: WormBase] BY ORTHOLOGY TO:T20B5.1.1
19.6707 -21.84 0.000101462 236 15 7 69 [+] picture button
Trappc4 ENSRNOT00000016145 trafficking protein particle complex 4 [Source:RefSeq_peptide;Acc:NP_001003708]
17.1692 -21.06 0.000109724 267 14 6 38 [+] picture button
RGD1561161_predicted ENSRNOT00000039632 cDNA sequence BC067074 [Source:MarkerSymbol;Acc:MGI:3040697]cDNA sequence BC067074 [Source:MarkerSymbol;Acc:MGI:3040697] BY ORTHOLOGY TO:ENSMUST00000078163
17.7349 -23.89 0.000134384 700 20 2 27 [+] picture button
2310022K01Rik ENSRNOT00000031044 RIKEN cDNA 2310022K01 gene [Source:MarkerSymbol;Acc:MGI:1919159]
18.5336 -24.54 0.000163784 231 10 3 36 [+] picture button
Pank2 ENSRNOT00000033554 pantothenate kinase 2 (Hallervorden-Spatz syndrome) [Source:MarkerSymbol;Acc:MGI:1921700]
17.8134 -19.05 0.00023072 342 13 6 53 [+] picture button
Dcun1d4_predicted ENSRNOT00000002945 conserved hypothetical proteinconserved hypothetical protein BY ORTHOLOGY TO:AAEL006847-RA
17.1024 -21.28 0.000303337 700 19 7 34 [+] picture button
A330041C17Rik ENSRNOT00000035071 RIKEN cDNA A330041C17 gene [Source:MarkerSymbol;Acc:MGI:3606143]
17.8384 -22.8 0.000377401 700 16 3 24 [+] picture button
LOC690585 ENSRNOT00000054956 THO complex subunit 4 (Tho4) (Ally of AML-1 and LEF-1) (Transcriptional coactivator Aly/REF) (bZIP-enhancing factor BEF). [Source:Uniprot/SWISSPROT;Acc:Q86V81]THO complex subunit 4 (Tho4) (Ally of AML-1 and LEF-1) (Transcriptional coactivator Aly/REF) (bZIP-enhancing factor BEF). [Source:Uniprot/SWISSPROT;Acc:Q86V81] BY ORTHOLOGY TO:ENST00000331204
17.6073 -19.82 0.000455881 700 19 7 35 [+] picture button
Ddx56 ENSRNOT00000006642 DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 [Source:RefSeq_peptide;Acc:NP_001004211]
18.8747 -16.64 0.000475563 196 12 5 38 [+] picture button
Dclre1c ENSRNOT00000021506 Artemis protein (EC 3.1.-.-) (DNA cross-link repair 1C protein) (SNM1- like protein). [Source:Uniprot/SWISSPROT;Acc:Q5XIX3]
18.0458 -23.02 0.000517995 700 16 1 26 [+] picture button
Dclre1c ENSRNOT00000021771 Artemis protein (EC 3.1.-.-) (DNA cross-link repair 1C protein) (SNM1- like protein). [Source:Uniprot/SWISSPROT;Acc:Q5XIX3]
18.0458 -23.02 0.000517995 700 10 1 14 [+] picture button
RGD1560395_predicted ENSRNOT00000036996 RIKEN cDNA 1700108M19 gene [Source:MarkerSymbol;Acc:MGI:1920830]RIKEN cDNA 1700108M19 gene [Source:MarkerSymbol;Acc:MGI:1920830] BY ORTHOLOGY TO:ENSMUST00000020853
16.9418 -16.86 0.000612742 198 9 2 34 [+] picture button
Scap2 ENSRNOT00000016608 Src kinase-associated phosphoprotein 2 (Src family-associated phosphoprotein 2) (Src kinase-associated phosphoprotein 55-related protein) (SKAP55 homolog) (SKAP-HOM) (SKAP-55HOM) (SKAP55-HOM). [Source:Uniprot/SWISSPROT;Acc:Q920G0]
16.8695 -16.12 0.00065286 419 21 3 60 [+] picture button
Neu1 ENSRNOT00000042634 neuraminidase 1 (Neu1), mRNA [Source:RefSeq_dna;Acc:NM_031522]
16.5565 -20.1 0.000675614 700 15 7 26 [+] picture button
NP_001014056.1 ENSRNOT00000018892 glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Source:RefSeq_peptide;Acc:NP_001014056]
17.624 -18.1 0.000690397 313 13 1 40 [+] picture button
Spa17 ENSRNOT00000014866 sperm autoantigenic protein 17 [Source:RefSeq_peptide;Acc:NP_445934]
17.7347 -23.9 0.000734392 700 19 5 30 [+] picture button
Thap7 ENSRNOT00000057751 THAP domain-containing protein 7. [Source:Uniprot/SWISSPROT;Acc:Q9BT49]THAP domain-containing protein 7. [Source:Uniprot/SWISSPROT;Acc:Q9BT49] BY ORTHOLOGY TO:ENSMMUT00000028829
16.905 -21.69 0.000873786 700 18 3 20 [+] picture button
Ace ENSRNOT00000010627 Angiotensin-converting enzyme, somatic isoform precursor (EC 3.4.15.1) (Dipeptidyl carboxypeptidase I) (Kininase II) [Contains: Angiotensin- converting enzyme, somatic isoform, soluble form]. [Source:Uniprot/SWISSPROT;Acc:P47820]
17.2829 -17.78 0.000920413 216 10 6 35 [+] picture button
RGD1562747_predicted ENSRNOT00000056518 Protein CXorf40A (Endothelial-overexpressed lipopolysaccharide- associated factor 1). [Source:Uniprot/SWISSPROT;Acc:Q8TE69]Protein CXorf40A (Endothelial-overexpressed lipopolysaccharide- associated factor 1). [Source:Uniprot/SWISSPROT;Acc:Q8TE69] BY ORTHOLOGY TO:ENSGACT00000026467
19.2158 -20.9 0.00101033 246 13 3 50 [+] picture button
Msh2 ENSRNOT00000021538 DNA mismatch repair protein Msh2 (MutS protein homolog 2). [Source:Uniprot/SWISSPROT;Acc:P54275]
18.0788 -19.34 0.00105382 61 2 3 4 [+] picture button
MGC109455 ENSRNOT00000026134 RING finger protein 185. [Source:Uniprot/SWISSPROT;Acc:Q568Y3]
15.9726 -26.63 0.00107624 2028 8 3 8 [+] picture button
Ap1b1 ENSRNOT00000011822 AP-1 complex subunit beta-1 (Adapter-related protein complex 1 beta-1 subunit) (Beta-adaptin 1) (Adaptor protein complex AP-1 beta-1 subunit) (Golgi adaptor HA1/AP1 adaptin beta subunit) (Clathrin assembly protein complex 1 beta large chain). [Source:Uniprot/SWISSPROT;Acc:P52303]
16.6368 -18.89 0.00112269 770 23 4 34 [+] picture button
Vapa ENSRNOT00000020681 Vesicle-associated membrane protein-associated protein A (VAMP- associated protein A) (VAMP-A) (VAP-A) (33 kDa Vamp-associated protein) (VAP-33). [Source:Uniprot/SWISSPROT;Acc:Q9Z270]
17.4504 -14.47 0.00114211 624 7 2 11 [+] picture button
Ng3 ENSRNOT00000000499 EGF-like domain-containing protein 8 precursor (Epidermal growth factor-like protein 8) (Multiple EGF-like domain protein 8). [Source:Uniprot/SWISSPROT;Acc:Q6MG84]
16.6976 -16.98 0.00128898 700 15 4 21 [+] picture button
LOC691143 ENSRNOT00000016254 similar to Serum amyloid A-3 protein precursor (LOC691143), mRNA [Source:RefSeq_dna;Acc:XR_007025]
17.7347 -24.23 0.00133112 700 17 2 20 [+] picture button
Arl6ip4 ENSRNOT00000001432 ADP-ribosylation factor-like 6 interacting protein 4 [Source:RefSeq_peptide;Acc:NP_001020801]
19.4433 -28.78 0.00138481 161 8 6 43 [+] picture button
NEO1_RAT ENSRNOT00000009312 Neogenin precursor (Fragment). [Source:Uniprot/SWISSPROT;Acc:P97603]
17.0264 -20.92 0.00142536 723 17 9 35 [+] picture button
RGD1562038_predicted ENSRNOT00000010746 voltage-gated calcium channel alpha(2)delta-4 subunit [Source:RefSeq_peptide;Acc:NP_758952]voltage-gated calcium channel alpha(2)delta-4 subunit [Source:RefSeq_peptide;Acc:NP_758952] BY ORTHOLOGY TO:ENSGALT00000037501
15.9716 -26.76 0.00143305 700 17 2 23 [+] picture button
LOC688429 ENSRNOT00000017867 Rho GTPase activating protein 10 [Source:RefSeq_peptide;Acc:NP_078881]Rho GTPase activating protein 10 [Source:RefSeq_peptide;Acc:NP_078881] BY ORTHOLOGY TO:ENSCAFT00000012463
16.5939 -23.39 0.00146654 700 18 4 27 [+] picture button
RGD1304706 ENSRNOT00000045696 Transmembrane protein 147. [Source:Uniprot/SWISSPROT;Acc:Q2TA63]
16.8013 -23.01 0.00146654 700 13 1 17 [+] picture button
RGD1561028 ENSRNOT00000037874 Similar to MGC47262 protein. [Source:Uniprot/SPTREMBL;Acc:Q2M1K5]
17.9088 -20.52 0.00163249 700 20 5 35 [+] picture button
Cutl2_predicted ENSRNOT00000001697 Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2). [Source:Uniprot/SWISSPROT;Acc:O14529]Homeobox protein cut-like 2 (Homeobox protein Cux-2) (Cut-like 2). [Source:Uniprot/SWISSPROT;Acc:O14529] BY ORTHOLOGY TO:SINFRUT00000142977
16.9303 -23.95 0.0016716 700 19 7 25 [+] picture button
Npc2 ENSRNOT00000016076 epididymal secretory protein E1 [Source:RefSeq_peptide;Acc:NP_775141]
16.4076 -15.74 0.00168071 612 23 4 36 [+] picture button
Vamp5 ENSRNOT00000016984 Vesicle-associated membrane protein 5 (VAMP-5) (Myobrevin). [Source:Uniprot/SWISSPROT;Acc:Q9Z2J5]
16.3734 -29.62 0.00173424 700 15 6 29 [+] picture button
Pank2 ENSRNOT00000055736 pantothenate kinase 2 (Hallervorden-Spatz syndrome) [Source:MarkerSymbol;Acc:MGI:1921700]
16.5966 -19.05 0.00173629 700 14 1 17 [+] picture button
RGD1307009 ENSRNOT00000022703 retinoid x receptor interacting protein [Source:RefSeq_peptide;Acc:NP_001013906]
17.624 -22.64 0.00177861 247 15 6 50 [+] picture button
Mybpc3_predicted ENSRNOT00000016652 Myosin-binding protein C, cardiac-type (Cardiac MyBP-C) (C-protein, cardiac muscle isoform) (Fragment). [Source:Uniprot/SWISSPROT;Acc:P56741]
17.0087 -22.37 0.00190058 700 20 5 34 [+] picture button
LOC683132 ENSRNOT00000060929 predicted gene, EG244595 [Source:MarkerSymbol;Acc:MGI:3648919]predicted gene, EG244595 [Source:MarkerSymbol;Acc:MGI:3648919] BY ORTHOLOGY TO:ENSMUST00000095211
17.2255 -14.28 0.00192101 700 11 2 20 [+] picture button
Sbsn ENSRNOT00000028526 suprabasin [Source:MarkerSymbol;Acc:MGI:2446326]
17.1124 -22.24 0.00199376 700 17 2 23 [+] picture button
Ube2i ENSRNOT00000024406 SUMO-conjugating enzyme UBC9 (EC 6.3.2.-) (SUMO-protein ligase) (Ubiquitin-conjugating enzyme E2 I) (Ubiquitin-protein ligase I) (Ubiquitin carrier protein I) (Ubiquitin carrier protein 9) (Ubiquitin-conjugating enzyme UbcE2A). [Source:Uniprot/SWISSPROT;Acc:P63281]
16.507 -16.9 0.00203062 512 18 6 34 [+] picture button
Trpv1 ENSRNOT00000026456 Transient receptor potential cation channel subfamily V member 1 (TrpV1) (osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1) (Vanilloid receptor type 1-like) (Capsaicin receptor). [Source:Uniprot/SWISSPROT;Acc:O35433]
16.3864 -18.53 0.00206391 700 17 1 16 [+] picture button
RGD1565360_predicted ENSRNOT00000002291 holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) [Source:MarkerSymbol;Acc:MGI:894646]holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) [Source:MarkerSymbol;Acc:MGI:894646] BY ORTHOLOGY TO:ENSMUST00000088945
17.2161 -18.4 0.00206391 700 23 2 36 [+] picture button
RGD1304929_predicted ENSRNOT00000039518 Uncharacterized protein C13orf18. [Source:Uniprot/SWISSPROT;Acc:Q9H714]Uncharacterized protein C13orf18. [Source:Uniprot/SWISSPROT;Acc:Q9H714] BY ORTHOLOGY TO:ENSBTAT00000017794
17.3276 -20.99 0.00208181 700 17 4 37 [+] picture button
Q9R273_RAT ENSRNOT00000049582 Ryanodine receptor type 3 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9R273]
19.4978 -27.99 0.0021251 700 16 4 21 [+] picture button
Zdhhc24 ENSRNOT00000026832 Probable palmitoyltransferase ZDHHC24 (EC 2.3.1.-) (Zinc finger DHHC domain-containing protein 24) (DHHC-24) (Membrane-associated zinc finger protein DHHC25). [Source:Uniprot/SWISSPROT;Acc:Q2TGI5]
16.8013 -20.57 0.00213335 700 20 3 26 [+] picture button
Chrna9 ENSRNOT00000003382 Neuronal acetylcholine receptor subunit alpha-9 precursor (Nicotinic acetylcholine receptor subunit alpha 9) (NACHR alpha 9). [Source:Uniprot/SWISSPROT;Acc:P43144]
16.951 -17.75 0.00216867 411 16 3 30 [+] picture button
Kiaa0415 ENSRNOT00000001469 KIAA0415 protein (Kiaa0415), mRNA [Source:RefSeq_dna;Acc:NM_001037220]
15.8386 -15.74 0.00217617 700 15 3 33 [+] picture button
Trpv1 ENSRNOT00000026505 Transient receptor potential cation channel subfamily V member 1 (TrpV1) (osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1) (Vanilloid receptor type 1-like) (Capsaicin receptor). [Source:Uniprot/SWISSPROT;Acc:O35433]
16.3481 -18.53 0.00219674 716 15 1 14 [+] picture button

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Download table: GFF TXT
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