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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-21

906 hits found.


Page 1 of 19
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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LOC688065 ENSRNOT00000031360 chemokine (C-C motif) ligand 1 [Source:MarkerSymbol;Acc:MGI:98258]chemokine (C-C motif) ligand 1 [Source:MarkerSymbol;Acc:MGI:98258] BY ORTHOLOGY TO:ENSMUST00000021043
17.5535 -22.73 4.52454e-10 700 18 5 29 [+] picture button
Pdcd4 ENSRNOT00000020155 Programmed cell death protein 4 (Death up-regulated gene protein). [Source:Uniprot/SWISSPROT;Acc:Q9JID1]
17.8348 -17.79 1.06798e-08 700 20 11 45 [+] picture button
Wwp1 ENSRNOT00000009047 WW domain containing E3 ubiquitin protein ligase 1 [Source:RefSeq_peptide;Acc:NP_001019928]
16.9418 -14.38 3.65059e-08 278 13 11 38 [+] picture button
O70185_RAT ENSRNOT00000032356 NF1-B1. [Source:Uniprot/SPTREMBL;Acc:O70185]
18.4875 -18.59 2.1094e-07 925 12 9 23 [+] picture button
LOC691164 ENSRNOT00000009319 Peli1 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q562B8]
16.0401 -13.3 3.48939e-07 862 11 10 18 [+] picture button
Tgfbi ENSRNOT00000016390 Transforming growth factor-beta-induced protein ig-h3 precursor (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP). [Source:Uniprot/SWISSPROT;Acc:Q15582]Transforming growth factor-beta-induced protein ig-h3 precursor (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP). [Source:Uniprot/SWISSPROT;Acc:Q15582] BY ORTHOLOGY TO:ENSOANT00000013282
16.5213 -16.05 4.03374e-07 609 22 7 36 [+] picture button
RGD1563612_predicted ENSRNOT00000011395 Glucocorticoid-induced transcript 1 protein. [Source:Uniprot/SWISSPROT;Acc:Q86VQ1]Glucocorticoid-induced transcript 1 protein. [Source:Uniprot/SWISSPROT;Acc:Q86VQ1] BY ORTHOLOGY TO:ENSGACT00000000100
16.4032 -14.33 7.9385e-07 794 16 7 23 [+] picture button
RGD1311456_predicted ENSRNOT00000020089 family with sequence similarity 63, member B (FAM63B), transcript variant 1, mRNA [Source:RefSeq_dna;Acc:NM_001040450]family with sequence similarity 63, member B (FAM63B), transcript variant 1, mRNA [Source:RefSeq_dna;Acc:NM_001040450] BY ORTHOLOGY TO:SINFRUT00000142938
16.1688 -17.42 1.59552e-06 585 15 7 23 [+] picture button
MRIP_RAT ENSRNOT00000039444 Myosin phosphatase Rho-interacting protein (Rho-interacting protein 3) (p116Rip) (RIP3). [Source:Uniprot/SWISSPROT;Acc:Q9ERE6]
17.5141 -17.31 2.16118e-06 629 14 7 26 [+] picture button
Abra ENSRNOT00000010539 Actin-binding Rho-activating protein (Striated muscle activator of Rho-dependent signaling) (STARS) (MS1). [Source:Uniprot/SWISSPROT;Acc:Q8K4K7]
15.9185 -5.36 4.45638e-06 101 6 2 20 [+] picture button
Tomm40 ENSRNOT00000025281 Probable mitochondrial import receptor subunit TOM40 homolog (Translocase of outer membrane 40 kDa subunit homolog) (38 kDa mitochondrial outer membrane protein) (OM38). [Source:Uniprot/SWISSPROT;Acc:Q75Q40]
16.3905 -13.48 4.94515e-06 700 16 7 21 [+] picture button
Dhrs9 ENSRNOT00000008921 Dehydrogenase/reductase SDR family member 9 precursor (EC 1.1.-.-) (3- alpha hydroxysteroid dehydrogenase) (3alpha-HSD) (Short-chain dehydrogenase/reductase retSDR8). [Source:Uniprot/SWISSPROT;Acc:Q8VD48]
17.4314 -19.02 6.08046e-06 506 16 3 32 [+] picture button
Rtn4 ENSRNOT00000006443 Reticulon-4 (Neurite outgrowth inhibitor) (Nogo protein) (Foocen) (Glut4 vesicle 20 kDa protein). [Source:Uniprot/SWISSPROT;Acc:Q9JK11]
16.1347 -14.63 7.88949e-06 921 13 8 18 [+] picture button
Mtap2 ENSRNOT00000045766 Microtubule-associated protein 2 (MAP 2) (MAP-2). [Source:Uniprot/SWISSPROT;Acc:P15146]
15.691 -9.38 8.65291e-06 182 9 8 30 [+] picture button
RGD1306820_predicted ENSRNOT00000023827 erythroid differentiation-related factor 1 [Source:RefSeq_peptide;Acc:NP_056423]erythroid differentiation-related factor 1 [Source:RefSeq_peptide;Acc:NP_056423] BY ORTHOLOGY TO:ENSGACT00000012751
15.5567 -8.53 9.40326e-06 700 16 6 18 [+] picture button
Elovl7_predicted ENSRNOT00000014074 elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1 [Source:RefSeq_peptide;Acc:NP_956072]elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1 [Source:RefSeq_peptide;Acc:NP_956072] BY ORTHOLOGY TO:ENSDART00000076686
16.4901 -9.25 9.84157e-06 700 19 7 28 [+] picture button
Ntf3 ENSRNOT00000026685 Neurotrophin-3 precursor (NT-3) (Neurotrophic factor) (HDNF) (Nerve growth factor 2) (NGF-2). [Source:Uniprot/SWISSPROT;Acc:P18280]
15.4175 -6.04 9.98733e-06 316 17 10 52 [+] picture button
Stag2_predicted ENSRNOT00000044240 Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2). [Source:Uniprot/SWISSPROT;Acc:Q8N3U4]Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2). [Source:Uniprot/SWISSPROT;Acc:Q8N3U4] BY ORTHOLOGY TO:ENSGACT00000026970
16.6473 -16.32 1.28885e-05 886 14 5 16 [+] picture button
LOC682612 ENSRNOT00000008420 SPT2, Suppressor of Ty, domain containing 1 [Source:RefSeq_peptide;Acc:NP_919261]SPT2, Suppressor of Ty, domain containing 1 [Source:RefSeq_peptide;Acc:NP_919261] BY ORTHOLOGY TO:ENSOANT00000024947
17.631 -24.79 1.39208e-05 700 15 3 28 [+] picture button
Pitx2 ENSRNOT00000014368 Pituitary homeobox 2 (rPtx2). [Source:Uniprot/SWISSPROT;Acc:Q9R0W1]
16.5939 -14.49 1.41946e-05 700 19 7 30 [+] picture button
ENSRNOT00000054763 NOT ANNOTATED
16.9821 -20.71 1.55194e-05 700 15 5 21 [+] picture button
Fkbp14 ENSRNOT00000013205 FK506 binding protein 14 [Source:RefSeq_peptide;Acc:NP_001013228]
15.7927 -16.85 1.72151e-05 603 17 5 28 [+] picture button
Pspc1 ENSRNOT00000028219 paraspeckle protein 1 [Source:RefSeq_peptide;Acc:NP_001020843]
16.3733 -6.95 2.21105e-05 302 15 8 41 [+] picture button
Zbtb2_predicted ENSRNOT00000026433 zinc finger and BTB domain containing 2 [Source:RefSeq_peptide;Acc:NP_001026241]zinc finger and BTB domain containing 2 [Source:RefSeq_peptide;Acc:NP_001026241] BY ORTHOLOGY TO:ENSGALT00000021152
16.8417 -18.03 2.29336e-05 700 14 5 19 [+] picture button
Srl_predicted ENSRNOT00000048687 Srl protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q66JG6]Srl protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q66JG6] BY ORTHOLOGY TO:ENSXETT00000037692
17.5505 -13.44 2.52992e-05 491 17 6 22 [+] picture button
RGD1310348_predicted ENSRNOT00000046594 Uncharacterized protein C22orf25. [Source:Uniprot/SWISSPROT;Acc:Q6ICL3]Uncharacterized protein C22orf25. [Source:Uniprot/SWISSPROT;Acc:Q6ICL3] BY ORTHOLOGY TO:ENSMMUT00000028462
18.365 -14.92 2.53038e-05 607 22 4 41 [+] picture button
Atxn10 ENSRNOT00000021071 Ataxin-10 (Spinocerebellar ataxia type 10 protein homolog) (Neuronal beta-catenin-like protein). [Source:Uniprot/SWISSPROT;Acc:Q9ER24]
16.3864 -12.65 3.25423e-05 700 21 4 36 [+] picture button
LOC306805 ENSRNOT00000020704 similar to asporin precursor (LOC306805), mRNA [Source:RefSeq_dna;Acc:NM_001014008]
16.3733 -9.5 3.53197e-05 197 9 5 19 [+] picture button
RGD1311704_predicted ENSRNOT00000036414 Uncharacterized protein C10orf12. [Source:Uniprot/SWISSPROT;Acc:Q8N655]Uncharacterized protein C10orf12. [Source:Uniprot/SWISSPROT;Acc:Q8N655] BY ORTHOLOGY TO:ENSMMUT00000014590
16.905 -16.24 3.78084e-05 700 19 7 38 [+] picture button
Plek ENSRNOT00000007044 Pleckstrin. [Source:Uniprot/SWISSPROT;Acc:Q4KM33]
16.5939 -23.23 3.8534e-05 700 16 1 21 [+] picture button
1110049F12Rik ENSRNOT00000014458 RIKEN cDNA 1110049F12 gene [Source:MarkerSymbol;Acc:MGI:1913443]
15.6203 -10.75 4.1133e-05 765 16 4 21 [+] picture button
LOC498404 ENSRNOT00000015627 Coiled-coil domain-containing protein 117. [Source:Uniprot/SWISSPROT;Acc:Q5M9G5]
15.5356 -15.42 4.18681e-05 1350 10 2 12 [+] picture button
Jag1 ENSRNOT00000010638 Jagged-1 precursor (Jagged1) (CD339 antigen). [Source:Uniprot/SWISSPROT;Acc:Q63722]
16.0483 -12.23 4.22107e-05 1547 7 10 8 [+] picture button
RGD621098 ENSRNOT00000020003 UPF0183 protein C16orf70 homolog. [Source:Uniprot/SWISSPROT;Acc:O08654]
16.471 -18.91 4.26059e-05 590 21 7 34 [+] picture button
Zdhhc13 ENSRNOT00000019175 zinc finger, DHHC domain containing 13 [Source:RefSeq_peptide;Acc:NP_001034126]
15.5567 -12.57 6.39218e-05 700 18 7 25 [+] picture button
RGD1305679 ENSRNOT00000060403 Uncharacterized protein C6orf105 homolog (Liver regeneration-related protein LRRG140). [Source:Uniprot/SWISSPROT;Acc:Q5M828]
17.1692 -9.3 6.40546e-05 291 15 3 49 [+] picture button
Dnajb4 ENSRNOT00000017381 DnaJ (Hsp40) homolog, subfamily B, member 4 [Source:RefSeq_peptide;Acc:NP_001013094]
17.7209 -24.11 6.51558e-05 700 19 3 29 [+] picture button
Pdk1 ENSRNOT00000002072 [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1, mitochondrial precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase isoform 1) (PDK p48). [Source:Uniprot/SWISSPROT;Acc:Q63065]
16.1459 -16.43 6.62841e-05 172 9 5 28 [+] picture button
Faslg ENSRNOT00000003998 Tumor necrosis factor ligand superfamily member 6 (Fas antigen ligand) (Fas ligand) (CD178 antigen) (CD95L protein) [Contains: Tumor necrosis factor ligand superfamily member 6, membrane form; Tumor necrosis factor ligand superfamily member 6, soluble for [Source:Uniprot/SWISSPROT;Acc:P36940]
15.8608 -13.32 6.80441e-05 713 19 6 30 [+] picture button
mrpl9 ENSRNOT00000028316 mitochondrial ribosomal protein L9 [Source:RefSeq_peptide;Acc:NP_001007697]
17.3364 -15.83 6.95464e-05 618 21 4 42 [+] picture button
RGD1306841 ENSRNOT00000026725 Integrator complex subunit 11 (EC 3.1.27.-) (Int11) (CPSF3L-like protein). [Source:Uniprot/SWISSPROT;Acc:Q3MHC2]
19.1021 -22.51 7.44691e-05 96 4 3 9 [+] picture button
hshin7 ENSRNOT00000030476 Ubiquitin thioesterase OTU1 (EC 3.1.2.-). [Source:Uniprot/SWISSPROT;Acc:Q32Q05]
16.9418 -11.57 7.75347e-05 175 8 7 20 [+] picture button
Mthfd1l_predicted ENSRNOT00000026564 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like [Source:RefSeq_peptide;Acc:NP_056255]methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like [Source:RefSeq_peptide;Acc:NP_056255] BY ORTHOLOGY TO:ENSGACT00000011475
15.3493 -14.68 7.79823e-05 700 18 1 31 [+] picture button
Snrpa1 ENSRNOT00000016758 small nuclear ribonucleoprotein polypeptide A' [Source:MarkerSymbol;Acc:MGI:1916231]
18.4199 -18.35 8.66719e-05 202 10 4 37 [+] picture button
RGD1562500_predicted ENSRNOT00000029572 RIKEN cDNA 2310010M20 gene [Source:MarkerSymbol;Acc:MGI:1916826]RIKEN cDNA 2310010M20 gene [Source:MarkerSymbol;Acc:MGI:1916826] BY ORTHOLOGY TO:ENSMUST00000054267
16.0322 -9.9 8.78728e-05 136 9 5 31 [+] picture button
Eif2a ENSRNOT00000018022 eukaryotic translation initiation factor 2A [Source:RefSeq_peptide;Acc:NP_114414]eukaryotic translation initiation factor 2A [Source:RefSeq_peptide;Acc:NP_114414] BY ORTHOLOGY TO:ENSMMUT00000045549
15.8892 -10.52 0.000102767 700 16 5 27 [+] picture button
LOC362317 ENSRNOT00000032505 krev interaction trapped 1 [Source:RefSeq_peptide;Acc:NP_001026144]krev interaction trapped 1 [Source:RefSeq_peptide;Acc:NP_001026144] BY ORTHOLOGY TO:ENSGALT00000015290
16.5455 -9.31 0.000110107 501 20 6 42 [+] picture button
Fundc1 ENSRNOT00000004676 FUN14 domain-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q5BJS4]
16.213 -14.54 0.000125044 1361 6 3 8 [+] picture button
Emb ENSRNOT00000015306 Embigin precursor. [Source:Uniprot/SWISSPROT;Acc:O88775]
15.2983 -17.14 0.000130733 376 19 5 51 [+] picture button
Pcbd1 ENSRNOT00000000687 Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) (PHS) (4-alpha- hydroxy-tetrahydropterin dehydratase) (Phenylalanine hydroxylase- stimulating protein) (Pterin carbinolamine dehydratase) (PCD) (Dimerization cofactor of hepatocyte nuclear factor 1-al [Source:Uniprot/SWISSPROT;Acc:P61459]
15.8679 -9.4 0.000133258 700 22 6 38 [+] picture button

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Download table: GFF TXT
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