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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-20b-5p

1057 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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RGD1564528_predicted ENSRNOT00000026724 mesenchymal stem cell protein DSC54 [Source:RefSeq_peptide;Acc:NP_057728]mesenchymal stem cell protein DSC54 [Source:RefSeq_peptide;Acc:NP_057728] BY ORTHOLOGY TO:ENSXETT00000010187
16.8012 -15.77 0.00000000111076 700 18 13 27 [+] picture button
Rsnl2 ENSRNOT00000011810 CAP-Gly domain-containing linker protein 4 (Restin-like protein 2). [Source:Uniprot/SWISSPROT;Acc:Q66HD5]
16.9842 -11.41 0.00000000124102 700 18 12 44 [+] picture button
Bambi ENSRNOT00000021801 BMP and activin membrane-bound inhibitor homolog precursor (Kinase- deficient TGFbeta superfamily receptor subunit). [Source:Uniprot/SWISSPROT;Acc:Q91XN4]
17.7085 -19.59 0.00000000152784 357 17 14 45 [+] picture button
LOC301334 ENSRNOT00000018935 Rho guanine nucleotide exchange factor 4 (APC-stimulated guanine nucleotide exchange factor) (Asef). [Source:Uniprot/SWISSPROT;Acc:Q9NR80]Rho guanine nucleotide exchange factor 4 (APC-stimulated guanine nucleotide exchange factor) (Asef). [Source:Uniprot/SWISSPROT;Acc:Q9NR80] BY ORTHOLOGY TO:ENSPTRT00000023127
16.2574 -21.02 0.00000000245466 700 23 5 44 [+] picture button
Arid4b ENSRNOT00000010836 AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1). [Source:Uniprot/SWISSPROT;Acc:Q9JKB5]
17.0099 -22.79 0.00000000279167 700 19 11 38 [+] picture button
Map3k2 ENSRNOT00000018975 Mitogen activated serine/threonine protein kinase MEKK2 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8R4A9]
16.6459 -10.74 0.00000000365613 700 17 7 22 [+] picture button
Wee1 ENSRNOT00000013362 Wee1-like protein kinase (EC 2.7.10.2) (Wee1A kinase). [Source:Uniprot/SWISSPROT;Acc:Q63802]
16.3047 -19.23 0.00000000543826 1120 17 8 34 [+] picture button
Nritp ENSRNOT00000023149 Ion transporter protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9QZG1]
16.6363 -12.03 0.00000000714679 910 11 8 23 [+] picture button
2210018M11Rik ENSRNOT00000043788 RIKEN cDNA 2210018M11 gene [Source:MarkerSymbol;Acc:MGI:1924203]
15.8036 -15.5 0.0000000114915 700 14 7 31 [+] picture button
RGD1306344 ENSRNOT00000055127 similar to Ab1-133 (RGD1306344), mRNA [Source:RefSeq_dna;Acc:NM_001047860]
17.4038 -25.02 0.0000000313552 700 23 8 43 [+] picture button
Pde3b ENSRNOT00000015498 cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B) (CGIPDE1). [Source:Uniprot/SWISSPROT;Acc:Q63085]
15.8998 -19.83 0.000000136215 990 8 11 15 [+] picture button
Q80YF3_RAT ENSRNOT00000009693 Mixed-lineage kinase 1 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q80YF3]
18.9751 -25.35 0.000000155761 207 11 8 44 [+] picture button
Zfp148 ENSRNOT00000002435 Zinc finger protein 148 (Zinc finger DNA-binding protein 89) (Transcription factor ZBP-89). [Source:Uniprot/SWISSPROT;Acc:Q62806]
15.7311 -10.83 0.000000160976 700 12 11 27 [+] picture button
LOC314393 ENSRNOT00000007061 Thyroid receptor-interacting protein 11 (TRIP-11) (Golgi-associated microtubule-binding protein 210) (GMAP-210) (Trip230) (Clonal evolution-related gene on chromosome 14). [Source:Uniprot/SWISSPROT;Acc:Q15643]Thyroid receptor-interacting protein 11 (TRIP-11) (Golgi-associated microtubule-binding protein 210) (GMAP-210) (Trip230) (Clonal evolution-related gene on chromosome 14). [Source:Uniprot/SWISSPROT;Acc:Q15643] BY ORTHOLOGY TO:ENSORLT00000012156
17.0073 -22.83 0.000000161511 700 15 7 29 [+] picture button
Fgd5_predicted ENSRNOT00000051022 FYVE, RhoGEF and PH domain-containing protein 5 (Zinc finger FYVE domain-containing protein 23). [Source:Uniprot/SWISSPROT;Acc:Q6ZNL6]FYVE, RhoGEF and PH domain-containing protein 5 (Zinc finger FYVE domain-containing protein 23). [Source:Uniprot/SWISSPROT;Acc:Q6ZNL6] BY ORTHOLOGY TO:ENSMODT00000035165
16.9869 -15.95 0.000000335181 700 13 7 22 [+] picture button
Tsg101 ENSRNOT00000018194 Tumor susceptibility gene 101 protein. [Source:Uniprot/SWISSPROT;Acc:Q6IRE4]
15.9562 -12.83 0.000000428041 700 15 6 32 [+] picture button
Pcaf ENSRNOT00000061882 p300/CBP-associated factor [Source:RefSeq_peptide;Acc:NP_001019423]
16.2515 -16.5 0.000000506149 1829 5 6 7 [+] picture button
Solh ENSRNOT00000027430 small optic lobes homolog (Drosophila) [Source:MarkerSymbol;Acc:MGI:1355075]
17.2605 -18.11 0.000000589339 237 14 6 37 [+] picture button
RGD1560731_predicted ENSRNOT00000001733 Probable G-protein coupled receptor 146 (G-protein coupled receptor PGR8). [Source:Uniprot/SWISSPROT;Acc:Q96CH1]Probable G-protein coupled receptor 146 (G-protein coupled receptor PGR8). [Source:Uniprot/SWISSPROT;Acc:Q96CH1] BY ORTHOLOGY TO:ENSXETT00000046667
16.8827 -21.56 0.000000703498 700 15 4 33 [+] picture button
Zfyve9_predicted ENSRNOT00000037523 zinc finger, FYVE domain containing 9 [Source:MarkerSymbol;Acc:MGI:2652838]zinc finger, FYVE domain containing 9 [Source:MarkerSymbol;Acc:MGI:2652838] BY ORTHOLOGY TO:ENSMUST00000042185
17.1453 -11.16 0.000000782142 443 14 8 41 [+] picture button
Mmp23 ENSRNOT00000023590 matrix metallopeptidase 23 [Source:MarkerSymbol;Acc:MGI:1347361]
16.049 -14.66 0.000000833504 700 18 6 30 [+] picture button
Med6_predicted ENSRNOT00000009483 RNA polymerase transcriptional regulation mediator subunit 6 homolog (Activator-recruited cofactor 33 kDa component) (ARC33) (Renal carcinoma antigen NY-REN-28). [Source:Uniprot/SWISSPROT;Acc:O75586]RNA polymerase transcriptional regulation mediator subunit 6 homolog (Activator-recruited cofactor 33 kDa component) (ARC33) (Renal carcinoma antigen NY-REN-28). [Source:Uniprot/SWISSPROT;Acc:O75586] BY ORTHOLOGY TO:ENSXETT00000004723
15.7447 -15.51 0.00000087601 305 14 4 46 [+] picture button
Bag5 ENSRNOT00000015333 BAG family molecular chaperone regulator 5 (BCL2-associated athanogene 5) (BAG-5). [Source:Uniprot/SWISSPROT;Acc:Q5QJC9]
16.2294 -19.48 0.000000881692 533 15 7 42 [+] picture button
RGD1561632_predicted ENSRNOT00000022563 Interleukin-25 precursor (IL-25) (Interleukin-17E) (IL-17E). [Source:Uniprot/SWISSPROT;Acc:Q9H293]Interleukin-25 precursor (IL-25) (Interleukin-17E) (IL-17E). [Source:Uniprot/SWISSPROT;Acc:Q9H293] BY ORTHOLOGY TO:ENSMMUT00000020692
15.8406 -17.36 0.000000947613 700 12 5 22 [+] picture button
Pou6f1 ENSRNOT00000049998 POU domain, class 6, transcription factor 1 (Brain-specific homeobox/POU domain protein 5) (Brain-5) (Brn-5 protein). [Source:Uniprot/SWISSPROT;Acc:P56223]
16.8014 -15.53 0.00000106843 359 17 5 54 [+] picture button
Usp53_predicted ENSRNOT00000019684 Inactive ubiquitin carboxyl-terminal hydrolase 53 (Inactive ubiquitin- specific peptidase 53). [Source:Uniprot/SWISSPROT;Acc:Q70EK8]Inactive ubiquitin carboxyl-terminal hydrolase 53 (Inactive ubiquitin- specific peptidase 53). [Source:Uniprot/SWISSPROT;Acc:Q70EK8] BY ORTHOLOGY TO:SINFRUT00000152651
16.049 -16.62 0.00000110239 700 14 5 21 [+] picture button
Ankrd9 ENSRNOT00000010610 ankyrin repeat domain 9 [Source:RefSeq_peptide;Acc:NP_001012112]
16.8033 -15.36 0.00000118642 97 5 7 25 [+] picture button
LOC683642 ENSRNOT00000013260 RIKEN cDNA D930015E06 gene [Source:MarkerSymbol;Acc:MGI:2443399]RIKEN cDNA D930015E06 gene [Source:MarkerSymbol;Acc:MGI:2443399] BY ORTHOLOGY TO:ENSMUST00000052342
16.4316 -17.78 0.00000149332 700 22 10 40 [+] picture button
Lrriq2_predicted ENSRNOT00000002191 Leucine-rich repeat and IQ domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q8IW35]Leucine-rich repeat and IQ domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q8IW35] BY ORTHOLOGY TO:ENSMMUT00000009163
15.8342 -7.28 0.00000193403 700 17 6 49 [+] picture button
Tor1b ENSRNOT00000009002 torsin family 1, member B [Source:RefSeq_peptide;Acc:NP_001034286]
17.832 -20.35 0.00000215035 175 8 7 34 [+] picture button
Npas3_predicted ENSRNOT00000049945 Neuronal PAS domain-containing protein 3 (Neuronal PAS3) (Member of PAS protein 6) (Basic-helix-loop-helix-PAS protein MOP6). [Source:Uniprot/SWISSPROT;Acc:Q8IXF0]Neuronal PAS domain-containing protein 3 (Neuronal PAS3) (Member of PAS protein 6) (Basic-helix-loop-helix-PAS protein MOP6). [Source:Uniprot/SWISSPROT;Acc:Q8IXF0] BY ORTHOLOGY TO:ENSMODT00000022361
17.3574 -18.05 0.00000234095 700 19 9 30 [+] picture button
LOC690286 ENSRNOT00000055664 Hepatic leukemia factor. [Source:Uniprot/SWISSPROT;Acc:Q64709]
16.6287 -14.94 0.00000309106 700 16 7 32 [+] picture button
Cdk7 ENSRNOT00000025026 Cell division protein kinase 7 (EC 2.7.11.22) (EC 2.7.11.23) (CDK- activating kinase) (CAK) (TFIIH basal transcription factor complex kinase subunit) (39 protein kinase) (P39 Mo15) (Fragment). [Source:Uniprot/SWISSPROT;Acc:P51952]
15.6602 -6.79 0.00000337175 200 10 7 32 [+] picture button
Nagk ENSRNOT00000042875 N-acetylglucosamine kinase (EC 2.7.1.59) (GlcNAc kinase). [Source:Uniprot/SWISSPROT;Acc:P81799]
16.346 -6.92 0.00000364508 119 5 8 21 [+] picture button
Naalad2_predicted ENSRNOT00000007855 N-acetylated alpha-linked acidic dipeptidase 2 [Source:MarkerSymbol;Acc:MGI:1919810]N-acetylated alpha-linked acidic dipeptidase 2 [Source:MarkerSymbol;Acc:MGI:1919810] BY ORTHOLOGY TO:ENSMUST00000001826
17.3417 -17.33 0.00000423253 407 17 5 49 [+] picture button
March8 ENSRNOT00000017294 membrane-associated ring finger (C3HC4) 8 [Source:MarkerSymbol;Acc:MGI:1919029]
16.6743 -13.3 0.00000428199 700 14 2 26 [+] picture button
LOC682704 ENSRNOT00000047305 Probable ubiquitin-conjugating enzyme E2 W (EC 6.3.2.19) (Ubiquitin- protein ligase W) (Ubiquitin carrier protein W). [Source:Uniprot/SWISSPROT;Acc:Q96B02]Probable ubiquitin-conjugating enzyme E2 W (EC 6.3.2.19) (Ubiquitin- protein ligase W) (Ubiquitin carrier protein W). [Source:Uniprot/SWISSPROT;Acc:Q96B02] BY ORTHOLOGY TO:ENSGACT00000003616
17.4809 -23.95 0.00000431003 700 19 7 46 [+] picture button
Tnfrsf21_predicted ENSRNOT00000015918 Tumor necrosis factor receptor superfamily member 21 precursor (TNFR- related death receptor 6) (Death receptor 6). [Source:Uniprot/SWISSPROT;Acc:O75509]Tumor necrosis factor receptor superfamily member 21 precursor (TNFR- related death receptor 6) (Death receptor 6). [Source:Uniprot/SWISSPROT;Acc:O75509] BY ORTHOLOGY TO:ENSOANT00000013161
16.7263 -15.12 0.00000446269 700 12 5 20 [+] picture button
Spag9_predicted ENSRNOT00000055627 C-jun-amino-terminal kinase-interacting protein 4 (JNK-interacting protein 4) (JIP-4) (JNK-associated leucine-zipper protein) (JLP) (Sperm-associated antigen 9) (Mitogen-activated protein kinase 8- interacting protein 4) (Human lung cancer protein 6) (HLC [Source:Uniprot/SWISSPROT;Acc:O60271]C-jun-amino-terminal kinase-interacting protein 4 (JNK-interacting protein 4) (JIP-4) (JNK-associated leucine-zipper protein) (JLP) (Sperm-associated antigen 9) (Mitogen-activated protein kinase 8- interacting protein 4) (Human lung cancer protein 6) (HLC [Source:Uniprot/SWISSPROT;Acc:O60271] BY ORTHOLOGY TO:ENSMMUT00000031704
15.8405 -14.85 0.00000479072 652 19 10 39 [+] picture button
Stk17b ENSRNOT00000016856 Serine/threonine-protein kinase 17B (EC 2.7.11.1) (DAP kinase-related apoptosis-inducing protein kinase 2). [Source:Uniprot/SWISSPROT;Acc:Q91XS8]
15.988 -11.44 0.00000504025 876 17 7 23 [+] picture button
Q8C784-2 ENSRNOT00000036226 CP052_MOUSE Isoform 2 of Q8C784 - Mus musculus (Mouse) [Source:Uniprot/Varsplic;Acc:Q8C784-2]
16.8773 -20.79 0.00000574399 586 13 6 34 [+] picture button
RGD1564719_predicted ENSRNOT00000033396 Uncharacterized protein C19orf40. [Source:Uniprot/SWISSPROT;Acc:Q9BTP7]Uncharacterized protein C19orf40. [Source:Uniprot/SWISSPROT;Acc:Q9BTP7] BY ORTHOLOGY TO:ENST00000254262
17.6985 -22.26 0.00000575112 700 15 5 31 [+] picture button
RGD1565078_predicted ENSRNOT00000059063 Zinc finger CCCH-type-containing protein 12C (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9C0D7]Zinc finger CCCH-type-containing protein 12C (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9C0D7] BY ORTHOLOGY TO:ENSOANT00000009992
15.9448 -14.11 0.00000671185 700 18 7 35 [+] picture button
Tbx3 ENSRNOT00000011552 T-box transcription factor TBX3 (T-box protein 3). [Source:Uniprot/SWISSPROT;Acc:Q7TST9]
16.1279 -18.6 0.00000752301 700 12 5 21 [+] picture button
Trpv6 ENSRNOT00000020616 Transient receptor potential cation channel subfamily V member 6 (TrpV6) (Epithelial calcium channel 2) (ECaC2) (Calcium transport protein 1) (CaT1). [Source:Uniprot/SWISSPROT;Acc:Q9R186]
17.9557 -25 0.0000076644 441 16 6 46 [+] picture button
RGD1563070_predicted ENSRNOT00000036235 G protein-coupled receptor 137ba [Source:RefSeq_peptide;Acc:NP_001007434]G protein-coupled receptor 137ba [Source:RefSeq_peptide;Acc:NP_001007434] BY ORTHOLOGY TO:ENSDART00000066604
18.0036 -16.14 0.00000773475 481 19 8 40 [+] picture button
Usp3 ENSRNOT00000057742 ubiquitin specific peptidase 3 [Source:MarkerSymbol;Acc:MGI:2152450]
15.7364 -10.96 0.00000918092 700 26 9 38 [+] picture button
Tnks2_predicted ENSRNOT00000039942 Tankyrase-2 (EC 2.4.2.30) (TANK2) (Tankyrase II) (TNKS-2) (TRF1- interacting ankyrin-related ADP-ribose polymerase 2) (Tankyrase-like protein) (Tankyrase-related protein). [Source:Uniprot/SWISSPROT;Acc:Q9H2K2]Tankyrase-2 (EC 2.4.2.30) (TANK2) (Tankyrase II) (TNKS-2) (TRF1- interacting ankyrin-related ADP-ribose polymerase 2) (Tankyrase-like protein) (Tankyrase-related protein). [Source:Uniprot/SWISSPROT;Acc:Q9H2K2] BY ORTHOLOGY TO:ENSMODT00000008519
16.2574 -17.21 0.00000960877 700 18 9 32 [+] picture button
Dnm2 ENSRNOT00000010947 Dynamin-2 (EC 3.6.5.5). [Source:Uniprot/SWISSPROT;Acc:P39052]
16.1982 -16.96 0.0000104837 739 9 6 17 [+] picture button
RGD1309759_predicted ENSRNOT00000020810 Uncharacterized protein C6orf72 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9NU53]Uncharacterized protein C6orf72 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9NU53] BY ORTHOLOGY TO:ENSOANT00000001696
16.5215 -9.08 0.0000123378 544 15 5 37 [+] picture button

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Download table: GFF TXT
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