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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-20b-3p

920 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Q5BJU4_RAT ENSRNOT00000028119 Osbpl5 protein. [Source:Uniprot/SPTREMBL;Acc:Q5BJU4]
16.2827 -24.72 0.000000143291 700 18 5 26 [+] picture button
Rasl11b ENSRNOT00000002869 RAS-like family 11 member B [Source:RefSeq_peptide;Acc:NP_001002830]
17.4228 -24.07 0.000000415048 912 16 4 21 [+] picture button
ENSRNOT00000046689 CDNA FLJ44741 fis, clone BRACE3027931. [Source:Uniprot/SPTREMBL;Acc:Q6ZTE4]CDNA FLJ44741 fis, clone BRACE3027931. [Source:Uniprot/SPTREMBL;Acc:Q6ZTE4] BY ORTHOLOGY TO:ENST00000378337
16.179 -18.14 0.000001 700 30 1 3 [+] picture button
RGD1564670_predicted ENSRNOT00000047387 cytoplasmic polyadenylation element binding protein 3 [Source:MarkerSymbol;Acc:MGI:2443075]cytoplasmic polyadenylation element binding protein 3 [Source:MarkerSymbol;Acc:MGI:2443075] BY ORTHOLOGY TO:ENSMUST00000079754
15.9353 -18.51 0.00000275865 700 14 7 27 [+] picture button
Tbx1_predicted ENSRNOT00000002597 T-box transcription factor TBX1 (T-box protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8AXX2]T-box transcription factor TBX1 (T-box protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8AXX2] BY ORTHOLOGY TO:ENSDART00000100670
16.0322 -13.07 0.00000421457 283 14 4 37 [+] picture button
Mpp6_predicted ENSRNOT00000029332 MAGUK p55 subfamily member 6 (Veli-associated MAGUK 1) (VAM-1). [Source:Uniprot/SWISSPROT;Acc:Q9NZW5]MAGUK p55 subfamily member 6 (Veli-associated MAGUK 1) (VAM-1). [Source:Uniprot/SWISSPROT;Acc:Q9NZW5] BY ORTHOLOGY TO:ENSGACT00000011164
15.8679 -19.01 0.00000433672 700 11 3 15 [+] picture button
RGD1306660_predicted ENSRNOT00000022650 Vesicle transport protein USE1 (USE1-like protein) (Putative MAPK- activating protein PM26) (Protein p31). [Source:Uniprot/SWISSPROT;Acc:Q9NZ43]Vesicle transport protein USE1 (USE1-like protein) (Putative MAPK- activating protein PM26) (Protein p31). [Source:Uniprot/SWISSPROT;Acc:Q9NZ43] BY ORTHOLOGY TO:SINFRUT00000157007
15.9158 -19.65 0.00000714526 700 19 5 33 [+] picture button
RGD1312038_predicted ENSRNOT00000032108 RGD1312038_predicted protein. [Source:Uniprot/SPTREMBL;Acc:A0JPQ8]
15.7642 -19.67 0.00000811913 700 15 1 25 [+] picture button
Npat_predicted ENSRNOT00000049076 nuclear protein in the AT region [Source:MarkerSymbol;Acc:MGI:107605]nuclear protein in the AT region [Source:MarkerSymbol;Acc:MGI:107605] BY ORTHOLOGY TO:ENSMUST00000035850
15.7642 -20.46 0.00000985986 700 13 2 17 [+] picture button
RGD1309759_predicted ENSRNOT00000020810 Uncharacterized protein C6orf72 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9NU53]Uncharacterized protein C6orf72 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9NU53] BY ORTHOLOGY TO:ENSOANT00000001696
16.4395 -21.5 0.0000123378 544 15 5 37 [+] picture button
Ptpn3 ENSRNOT00000059627 Ptpn3 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q562B7]
15.7642 -24.88 0.000026362 700 15 6 27 [+] picture button
Map3k3_predicted ENSRNOT00000055126 NOT ANNOTATED
16.3687 -23 0.0000281124 700 13 1 14 [+] picture button
RGD1305455 ENSRNOT00000060020 RGD1305455 protein. [Source:Uniprot/SPTREMBL;Acc:Q5BK00]
18.0215 -25.57 0.0000298849 582 14 1 26 [+] picture button
RGD1307773_predicted ENSRNOT00000012720 RIKEN cDNA 1700012G19 gene [Source:MarkerSymbol;Acc:MGI:1914328]RIKEN cDNA 1700012G19 gene [Source:MarkerSymbol;Acc:MGI:1914328] BY ORTHOLOGY TO:ENSMUST00000053024
16.3714 -23.79 0.0000319409 831 21 6 32 [+] picture button
Pkcbpb15 ENSRNOT00000009140 RanBP-type and C3HC4-type zinc finger-containing protein 1 (Ubiquitin- conjugating enzyme 7-interacting protein 3) (RBCC protein interacting with PKC) (Protein kinase C-binding protein beta-15). [Source:Uniprot/SWISSPROT;Acc:Q62921]
16.5174 -19.12 0.0000386859 509 16 4 31 [+] picture button
Krtcap2_predicted ENSRNOT00000027867 keratinocyte associated protein 2 [Source:MarkerSymbol;Acc:MGI:1913309]keratinocyte associated protein 2 [Source:MarkerSymbol;Acc:MGI:1913309] BY ORTHOLOGY TO:ENSMUST00000040888
17.631 -22.82 0.0000397455 700 17 6 26 [+] picture button
Stil ENSRNOT00000010410 Scl/Tal1 interrupting locus [Source:MarkerSymbol;Acc:MGI:107477]
16.2827 -21.49 0.0000423997 700 19 3 31 [+] picture button
Fgf2 ENSRNOT00000023388 Heparin-binding growth factor 2 precursor (HBGF-2) (Basic fibroblast growth factor) (BFGF) (Prostatropin). [Source:Uniprot/SWISSPROT;Acc:P13109]
19.2158 -23.51 0.0000451994 272 14 4 51 [+] picture button
Ubash3a ENSRNOT00000001541 ubiquitin associated and SH3 domain containing, A [Source:MarkerSymbol;Acc:MGI:1926074]
15.8336 -19.72 0.0000472917 671 16 2 24 [+] picture button
Tnks1bp1_predicted ENSRNOT00000012209 tankyrase 1 binding protein 1 [Source:MarkerSymbol;Acc:MGI:2446193]tankyrase 1 binding protein 1 [Source:MarkerSymbol;Acc:MGI:2446193] BY ORTHOLOGY TO:ENSMUST00000048400
17.631 -24.41 0.0000474129 700 16 5 26 [+] picture button
Dnmt1 ENSRNOT00000061192 DNA (cytosine-5-)-methyltransferase 1 [Source:RefSeq_peptide;Acc:NP_445806]
16.1766 -22.55 0.0000478256 700 19 7 36 [+] picture button
RGD1309051 ENSRNOT00000058642 Uncharacterized protein C14orf50 homolog. [Source:Uniprot/SWISSPROT;Acc:Q68FW6]
16.3422 -17.51 0.0000494169 700 19 4 30 [+] picture button
LOC686689 ENSRNOT00000037120 NOT ANNOTATED
15.7642 -28.24 0.0000557354 700 16 2 17 [+] picture button
Ptchd2 ENSRNOT00000036647 patched domain containing 2 [Source:MarkerSymbol;Acc:MGI:2444403]
15.8679 -17.4 0.000057853 700 13 3 17 [+] picture button
Psmc1 ENSRNOT00000005329 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S subunit ATPase 1). [Source:Uniprot/SWISSPROT;Acc:P62193]
16.1817 -19.98 0.0000582579 700 18 2 29 [+] picture button
Commd4_predicted ENSRNOT00000025205 T28F2.2 [Source:RefSeq_peptide;Acc:NP_491191]T28F2.2 [Source:RefSeq_peptide;Acc:NP_491191] BY ORTHOLOGY TO:T28F2.2
16.2827 -18.68 0.0000589326 700 16 4 28 [+] picture button
Tle4 ENSRNOT00000018272 Transducin-like enhancer protein 4 (Protein ESP2). [Source:Uniprot/SWISSPROT;Acc:Q07141]
15.9185 -15.1 0.0000597563 144 6 5 42 [+] picture button
Traf3ip1 ENSRNOT00000056612 TNF receptor-associated factor 3 interacting protein 1 [Source:RefSeq_peptide;Acc:NP_001012204]
17.2829 -18.51 0.0000630906 173 7 4 30 [+] picture button
LOC290396 ENSRNOT00000057956 Protein diaphanous homolog 3 (Diaphanous-related formin-3) (DRF3). [Source:Uniprot/SWISSPROT;Acc:Q9NSV4]Protein diaphanous homolog 3 (Diaphanous-related formin-3) (DRF3). [Source:Uniprot/SWISSPROT;Acc:Q9NSV4] BY ORTHOLOGY TO:ENSGALT00000027377
16.4901 -22.09 0.0000685118 700 16 1 28 [+] picture button
RGD1563359_predicted ENSRNOT00000011622 Inversin (Inversion of embryo turning homolog) (Nephrocystin-2). [Source:Uniprot/SWISSPROT;Acc:Q9Y283]Inversin (Inversion of embryo turning homolog) (Nephrocystin-2). [Source:Uniprot/SWISSPROT;Acc:Q9Y283] BY ORTHOLOGY TO:ENSGACT00000011977
16.2827 -25.32 0.0000693445 700 9 3 12 [+] picture button
Taf4b ENSRNOT00000037955 TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:MarkerSymbol;Acc:MGI:2152345]
18.357 -23.71 0.0000700394 700 18 4 31 [+] picture button
RGD1305455 ENSRNOT00000060019 RGD1305455 protein. [Source:Uniprot/SPTREMBL;Acc:Q5BK00]
17.668 -25.57 0.0000706351 700 20 4 39 [+] picture button
Epb4.1l4a_predicted ENSRNOT00000038247 Band 4.1-like protein 4 (Protein Nbl4). [Source:Uniprot/SWISSPROT;Acc:O57457]Band 4.1-like protein 4 (Protein Nbl4). [Source:Uniprot/SWISSPROT;Acc:O57457] BY ORTHOLOGY TO:ENSDART00000058627
16.9483 -22.21 0.0000730133 443 16 6 33 [+] picture button
Slc22a13_predicted ENSRNOT00000045105 Organic-cation transporter-like 3 (Solute carrier family 22 member 13). [Source:Uniprot/SWISSPROT;Acc:Q9Y226]Organic-cation transporter-like 3 (Solute carrier family 22 member 13). [Source:Uniprot/SWISSPROT;Acc:Q9Y226] BY ORTHOLOGY TO:ENST00000311856
16.2129 -21.06 0.0000768099 700 15 1 19 [+] picture button
Csmd2 ENSRNOT00000036029 CUB and Sushi multiple domains 2 [Source:MarkerSymbol;Acc:MGI:2386401]
15.9906 -18.44 0.0000795912 700 10 1 15 [+] picture button
RGD1307688 ENSRNOT00000013571 Pre-mRNA-splicing factor ISY1 homolog. [Source:Uniprot/SWISSPROT;Acc:Q6AYB3]
16.0747 -19.07 0.0000854054 546 17 3 23 [+] picture button
RGD1309073_predicted ENSRNOT00000032965 RIKEN cDNA A630050E13 gene [Source:MarkerSymbol;Acc:MGI:2442569]RIKEN cDNA A630050E13 gene [Source:MarkerSymbol;Acc:MGI:2442569] BY ORTHOLOGY TO:ENSMUST00000061327
17.6814 -20.19 0.0000861298 700 14 6 29 [+] picture button
Ugdh ENSRNOT00000003691 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH). [Source:Uniprot/SWISSPROT;Acc:O70199]
15.9091 -14.73 0.000086277 727 20 5 28 [+] picture button
Zfhx4_predicted ENSRNOT00000011641 Zinc finger homeobox protein 4 (Zinc finger homeodomain protein 4) (ZFH-4). [Source:Uniprot/SWISSPROT;Acc:Q86UP3]Zinc finger homeobox protein 4 (Zinc finger homeodomain protein 4) (ZFH-4). [Source:Uniprot/SWISSPROT;Acc:Q86UP3] BY ORTHOLOGY TO:ENSGALT00000025275
16.2732 -15.23 0.0000864566 700 22 7 41 [+] picture button
Acad11_predicted ENSRNOT00000022250 NOT ANNOTATED
17.0573 -17.11 0.0000876347 700 12 1 25 [+] picture button
Psmc6 ENSRNOT00000009649 similar to Psmc6 protein (predicted) (RGD1559647_predicted), mRNA [Source:RefSeq_dna;Acc:XR_008080]
16.6891 -15.12 0.000090118 501 20 4 43 [+] picture button
Cmtm3_predicted ENSRNOT00000014234 CKLF-like MARVEL transmembrane domain-containing protein 3 (Chemokine- like factor superfamily member 3). [Source:Uniprot/SWISSPROT;Acc:Q96MX0]CKLF-like MARVEL transmembrane domain-containing protein 3 (Chemokine- like factor superfamily member 3). [Source:Uniprot/SWISSPROT;Acc:Q96MX0] BY ORTHOLOGY TO:ENSGACT00000020375
16.1378 -21.69 0.0000922498 896 17 4 22 [+] picture button
LOC682071 ENSRNOT00000029620 Proteasome inhibitor PI31 subunit. [Source:Uniprot/SWISSPROT;Acc:Q5XIU5]
16.1078 -24.7 0.0000927527 369 20 4 50 [+] picture button
Twsg1_predicted ENSRNOT00000017915 Twisted gastrulation protein homolog 1 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9GZX9]Twisted gastrulation protein homolog 1 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9GZX9] BY ORTHOLOGY TO:ENSORLT00000005015
16.6007 -21.97 0.0000968576 231 11 2 47 [+] picture button
RGD1309341 ENSRNOT00000042181 CDNA FLJ38482 fis, clone FEBRA2022963. [Source:Uniprot/SPTREMBL;Acc:Q8N928]CDNA FLJ38482 fis, clone FEBRA2022963. [Source:Uniprot/SPTREMBL;Acc:Q8N928] BY ORTHOLOGY TO:ENSORLT00000009798
16.2596 -17.57 0.000100415 211 11 3 50 [+] picture button
RGD1565862_predicted ENSRNOT00000042670 NOT ANNOTATED
16.2155 -23.64 0.000101366 700 13 1 22 [+] picture button
Exosc4_predicted ENSRNOT00000016464 Exosome complex exonuclease RRP41 (EC 3.1.13.-) (Ribosomal RNA- processing protein 41) (Exosome component 4) (p12A). [Source:Uniprot/SWISSPROT;Acc:Q9NPD3]Exosome complex exonuclease RRP41 (EC 3.1.13.-) (Ribosomal RNA- processing protein 41) (Exosome component 4) (p12A). [Source:Uniprot/SWISSPROT;Acc:Q9NPD3] BY ORTHOLOGY TO:ENSOANT00000023466
17.7347 -20.21 0.000101939 700 17 2 35 [+] picture button
Ninj2 ENSRNOT00000013721 Ninjurin-2 (Nerve injury-induced protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9JHE8]
15.8821 -13.61 0.000104054 326 15 3 61 [+] picture button
Rab30 ENSRNOT00000013851 RAB30, member RAS oncogene family [Source:RefSeq_peptide;Acc:NP_001015012]
16.0753 -18.8 0.00011108 700 10 1 17 [+] picture button
Rab30 ENSRNOT00000055380 RAB30, member RAS oncogene family [Source:RefSeq_peptide;Acc:NP_001015012]
16.0705 -18.8 0.000112499 702 16 7 32 [+] picture button

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Download table: GFF TXT
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