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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-17-3p

935 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Pou6f1 ENSRNOT00000049998 POU domain, class 6, transcription factor 1 (Brain-specific homeobox/POU domain protein 5) (Brain-5) (Brn-5 protein). [Source:Uniprot/SWISSPROT;Acc:P56223]
15.7114 -21.27 3.10689e-07 359 17 5 54 [+] picture button
Optn ENSRNOT00000042881 optineurin [Source:RefSeq_peptide;Acc:NP_659549]
16.4901 -18.37 8.67122e-07 700 15 2 22 [+] picture button
RGD1565551_predicted ENSRNOT00000012513 NOT ANNOTATED
15.9716 -26.34 1e-06 700 16 1 6 [+] picture button
ENSRNOT00000046689 CDNA FLJ44741 fis, clone BRACE3027931. [Source:Uniprot/SPTREMBL;Acc:Q6ZTE4]CDNA FLJ44741 fis, clone BRACE3027931. [Source:Uniprot/SPTREMBL;Acc:Q6ZTE4] BY ORTHOLOGY TO:ENST00000378337
16.6976 -20.32 1e-06 700 30 1 3 [+] picture button
2210018M11Rik ENSRNOT00000020882 RIKEN cDNA 2210018M11 gene [Source:MarkerSymbol;Acc:MGI:1924203]
15.9185 -17.54 1e-06 199 9 1 38 [+] picture button
RGD1564670_predicted ENSRNOT00000047387 cytoplasmic polyadenylation element binding protein 3 [Source:MarkerSymbol;Acc:MGI:2443075]cytoplasmic polyadenylation element binding protein 3 [Source:MarkerSymbol;Acc:MGI:2443075] BY ORTHOLOGY TO:ENSMUST00000079754
16.2478 -25.39 1.43345e-06 700 14 7 27 [+] picture button
Npat_predicted ENSRNOT00000049076 nuclear protein in the AT region [Source:MarkerSymbol;Acc:MGI:107605]nuclear protein in the AT region [Source:MarkerSymbol;Acc:MGI:107605] BY ORTHOLOGY TO:ENSMUST00000035850
16.4901 -26.28 2.9948e-06 700 13 2 17 [+] picture button
RGD1306660_predicted ENSRNOT00000022650 Vesicle transport protein USE1 (USE1-like protein) (Putative MAPK- activating protein PM26) (Protein p31). [Source:Uniprot/SWISSPROT;Acc:Q9NZ43]Vesicle transport protein USE1 (USE1-like protein) (Putative MAPK- activating protein PM26) (Protein p31). [Source:Uniprot/SWISSPROT;Acc:Q9NZ43] BY ORTHOLOGY TO:SINFRUT00000157007
16.2429 -16.17 3.94585e-06 700 19 5 33 [+] picture button
Hsd11b2 ENSRNOT00000023130 Corticosteroid 11-beta-dehydrogenase isozyme 2 (EC 1.1.1.-) (11-DH2) (11-beta-hydroxysteroid dehydrogenase type 2) (11-beta-HSD2) (NAD- dependent 11-beta-hydroxysteroid dehydrogenase). [Source:Uniprot/SWISSPROT;Acc:P50233]
15.7895 -20.82 4.43833e-06 535 20 8 42 [+] picture button
Ctsb ENSRNOT00000014177 Cathepsin B precursor (EC 3.4.22.1) (Cathepsin B1) (RSG-2) [Contains: Cathepsin B light chain; Cathepsin B heavy chain]. [Source:Uniprot/SWISSPROT;Acc:P00787]
16.84 -24.77 5.88642e-06 793 18 2 22 [+] picture button
Q5BJU4_RAT ENSRNOT00000028119 Osbpl5 protein. [Source:Uniprot/SPTREMBL;Acc:Q5BJU4]
15.7642 -23.17 6.41244e-06 700 18 5 26 [+] picture button
Apobec3 ENSRNOT00000040546 apolipoprotein B editing complex 3 [Source:RefSeq_peptide;Acc:NP_001028875]
16.0697 -24.78 7.05117e-06 700 15 1 24 [+] picture button
Galnt3 ENSRNOT00000007615 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 [Source:RefSeq_peptide;Acc:NP_001015032]
15.6848 -19.06 8.06295e-06 735 16 7 21 [+] picture button
Hbxip_predicted ENSRNOT00000024473 Hepatitis B virus X-interacting protein (HBX-interacting protein) (HBV X-interacting protein). [Source:Uniprot/SWISSPROT;Acc:O43504]Hepatitis B virus X-interacting protein (HBX-interacting protein) (HBV X-interacting protein). [Source:Uniprot/SWISSPROT;Acc:O43504] BY ORTHOLOGY TO:ENSMODT00000030631
15.7005 -18.04 9.02629e-06 385 18 5 53 [+] picture button
Cda08 ENSRNOT00000021711 T-cell immunomodulatory protein precursor (Protein TIP) (Integrin- alpha FG-GAP repeat-containing protein 1) (CDA08-like protein). [Source:Uniprot/SWISSPROT;Acc:Q8R4E1]
15.9703 -23.2 9.79428e-06 1403 8 2 9 [+] picture button
Tnks1bp1_predicted ENSRNOT00000012209 tankyrase 1 binding protein 1 [Source:MarkerSymbol;Acc:MGI:2446193]tankyrase 1 binding protein 1 [Source:MarkerSymbol;Acc:MGI:2446193] BY ORTHOLOGY TO:ENSMUST00000048400
16.8013 -21.28 1.00298e-05 700 16 5 26 [+] picture button
Rasl11b ENSRNOT00000002869 RAS-like family 11 member B [Source:RefSeq_peptide;Acc:NP_001002830]
16.6125 -20.51 1.25868e-05 912 16 4 21 [+] picture button
Rab6a ENSRNOT00000048204 Ras-related protein Rab-6A (Rab-6) (Fragment). [Source:Uniprot/SWISSPROT;Acc:Q9WVB1]
17.8384 -19.17 1.25903e-05 700 14 7 20 [+] picture button
Prkar2a ENSRNOT00000027552 cAMP-dependent protein kinase type II-alpha regulatory subunit. [Source:Uniprot/SWISSPROT;Acc:P12368]
16.6007 -20.19 1.31545e-05 226 9 5 43 [+] picture button
Vim ENSRNOT00000024430 Vimentin. [Source:Uniprot/SWISSPROT;Acc:P31000]
22.5132 -35.8 1.3225e-05 309 14 8 50 [+] picture button
Cap1 ENSRNOT00000018711 Adenylyl cyclase-associated protein 1 (CAP 1). [Source:Uniprot/SWISSPROT;Acc:Q08163]
15.8971 -21.2 1.57487e-05 1019 14 5 16 [+] picture button
LOC682071 ENSRNOT00000029620 Proteasome inhibitor PI31 subunit. [Source:Uniprot/SWISSPROT;Acc:Q5XIU5]
16.4411 -27.79 2.27421e-05 369 20 4 50 [+] picture button
RGD1563245_predicted ENSRNOT00000004104 Probable G-protein coupled receptor 161 (G-protein coupled receptor RE2). [Source:Uniprot/SWISSPROT;Acc:Q8N6U8]Probable G-protein coupled receptor 161 (G-protein coupled receptor RE2). [Source:Uniprot/SWISSPROT;Acc:Q8N6U8] BY ORTHOLOGY TO:SINFRUT00000138055
16.6099 -24.93 2.7787e-05 700 18 2 28 [+] picture button
RGD1309341 ENSRNOT00000042181 CDNA FLJ38482 fis, clone FEBRA2022963. [Source:Uniprot/SPTREMBL;Acc:Q8N928]CDNA FLJ38482 fis, clone FEBRA2022963. [Source:Uniprot/SPTREMBL;Acc:Q8N928] BY ORTHOLOGY TO:ENSORLT00000009798
16.2596 -21.98 2.91016e-05 211 11 3 50 [+] picture button
Prdm14 ENSRNOT00000034525 PR domain containing 14 [Source:MarkerSymbol;Acc:MGI:3588194]
15.9729 -18.65 2.92858e-05 700 19 3 33 [+] picture button
Grwd1 ENSRNOT00000028594 Glutamate-rich WD repeat-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q5XI13]
15.9716 -15.78 2.96835e-05 700 21 2 35 [+] picture button
ENSRNOT00000040380 zinc finger and BTB domain containing 47 (ZBTB47), mRNA [Source:RefSeq_dna;Acc:NM_145166]zinc finger and BTB domain containing 47 (ZBTB47), mRNA [Source:RefSeq_dna;Acc:NM_145166] BY ORTHOLOGY TO:ENSGACT00000004427
16.5939 -18.4 3.03529e-05 700 20 4 29 [+] picture button
Lrrc28_predicted ENSRNOT00000033858 Leucine-rich repeat-containing protein 28. [Source:Uniprot/SWISSPROT;Acc:Q86X40]Leucine-rich repeat-containing protein 28. [Source:Uniprot/SWISSPROT;Acc:Q86X40] BY ORTHOLOGY TO:ENSORLT00000018488
16.179 -17.77 3.14832e-05 700 17 3 22 [+] picture button
Ripx ENSRNOT00000060349 Protein RUFY3 (Rap2-interacting protein x) (RIPx). [Source:Uniprot/SWISSPROT;Acc:Q5FVJ0]
16.406 -17.45 3.35999e-05 700 19 4 25 [+] picture button
Brwd3_predicted ENSRNOT00000057432 Bromodomain and WD repeat domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q6RI45]Bromodomain and WD repeat domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q6RI45] BY ORTHOLOGY TO:ENSOANT00000001176
17.4967 -25.16 3.47785e-05 700 20 7 28 [+] picture button
Dnmt1 ENSRNOT00000061192 DNA (cytosine-5-)-methyltransferase 1 [Source:RefSeq_peptide;Acc:NP_445806]
17.0115 -22 3.97249e-05 700 19 7 36 [+] picture button
RGD1309051 ENSRNOT00000058642 Uncharacterized protein C14orf50 homolog. [Source:Uniprot/SWISSPROT;Acc:Q68FW6]
16.0259 -16.59 4.21661e-05 700 19 4 30 [+] picture button
Q8K4D5_RAT ENSRNOT00000026640 Phospholipase D2 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8K4D5]
16.8849 -19.99 4.22114e-05 700 19 4 33 [+] picture button
Stard6 ENSRNOT00000058881 START domain containing protein 6 [Source:RefSeq_peptide;Acc:NP_001007628]
16.0089 -22.05 4.25042e-05 700 14 3 22 [+] picture button
Arl3 ENSRNOT00000027093 ADP-ribosylation factor-like protein 3 (ARD3). [Source:Uniprot/SWISSPROT;Acc:P37996]
18.4966 -31.22 4.33916e-05 700 14 5 22 [+] picture button
Psmc6 ENSRNOT00000009649 similar to Psmc6 protein (predicted) (RGD1559647_predicted), mRNA [Source:RefSeq_dna;Acc:XR_008080]
17.8735 -17.37 4.52124e-05 501 20 4 43 [+] picture button
Spdy1 ENSRNOT00000006073 Speedy protein A (Speedy-1) (Spy1) (Rapid inducer of G2/M progression in oocytes A) (RINGO A) (GS4). [Source:Uniprot/SWISSPROT;Acc:Q8R496]
16.328 -22.19 4.80451e-05 852 16 3 20 [+] picture button
Armc8 ENSRNOT00000019536 armadillo repeat containing 8 [Source:MarkerSymbol;Acc:MGI:1921375]
16.6372 -21.7 4.91129e-05 634 18 9 41 [+] picture button
Cyb561d2 ENSRNOT00000031739 Cytochrome b561 domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q641Y1]
15.8047 -18.65 5.32881e-05 281 16 6 57 [+] picture button
Iqgap2 ENSRNOT00000061551 IQ motif containing GTPase activating protein 2 [Source:MarkerSymbol;Acc:MGI:2449975]
15.8679 -20.38 5.42812e-05 700 14 2 19 [+] picture button
LOC362012 ENSRNOT00000025036 LOC362012 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q4FZS7]
16.5399 -19.27 5.66084e-05 680 12 6 21 [+] picture button
RGD1307773_predicted ENSRNOT00000012720 RIKEN cDNA 1700012G19 gene [Source:MarkerSymbol;Acc:MGI:1914328]RIKEN cDNA 1700012G19 gene [Source:MarkerSymbol;Acc:MGI:1914328] BY ORTHOLOGY TO:ENSMUST00000053024
16.0644 -24.42 5.84125e-05 831 21 6 32 [+] picture button
RGD1309759_predicted ENSRNOT00000020810 Uncharacterized protein C6orf72 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9NU53]Uncharacterized protein C6orf72 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9NU53] BY ORTHOLOGY TO:ENSOANT00000001696
19.3217 -33.96 6.1205e-05 544 15 5 37 [+] picture button
Zbtb8os_predicted ENSRNOT00000010941 C43H8.1 [Source:RefSeq_peptide;Acc:NP_492778]C43H8.1 [Source:RefSeq_peptide;Acc:NP_492778] BY ORTHOLOGY TO:C43H8.1.1
15.7635 -22.1 6.14987e-05 837 19 2 24 [+] picture button
Spata18 ENSRNOT00000002899 Spermatogenesis-associated protein 18 (Spermatid-expressing gene 1 protein) (Spetex-1). [Source:Uniprot/SWISSPROT;Acc:Q6AYL6]
16.6976 -21.4 6.45451e-05 700 16 3 23 [+] picture button
Tle4 ENSRNOT00000018272 Transducin-like enhancer protein 4 (Protein ESP2). [Source:Uniprot/SWISSPROT;Acc:Q07141]
16.2596 -17.81 6.58464e-05 144 6 5 42 [+] picture button
RGD1305314 ENSRNOT00000054717 Zinc finger protein 518. [Source:Uniprot/SWISSPROT;Acc:Q6AHZ1]Zinc finger protein 518. [Source:Uniprot/SWISSPROT;Acc:Q6AHZ1] BY ORTHOLOGY TO:ENSOANT00000008186
15.7607 -24.28 7.22051e-05 1862 5 4 6 [+] picture button
Naalad2_predicted ENSRNOT00000007855 N-acetylated alpha-linked acidic dipeptidase 2 [Source:MarkerSymbol;Acc:MGI:1919810]N-acetylated alpha-linked acidic dipeptidase 2 [Source:MarkerSymbol;Acc:MGI:1919810] BY ORTHOLOGY TO:ENSMUST00000001826
15.8244 -13.43 7.73532e-05 407 17 5 49 [+] picture button
Ris2_predicted ENSRNOT00000018923 DNA replication factor Cdt1 (Double parked homolog) (DUP). [Source:Uniprot/SWISSPROT;Acc:Q9H211]DNA replication factor Cdt1 (Double parked homolog) (DUP). [Source:Uniprot/SWISSPROT;Acc:Q9H211] BY ORTHOLOGY TO:ENST00000301019
15.8679 -21.33 7.86443e-05 700 19 5 31 [+] picture button
Pkcbpb15 ENSRNOT00000045314 RanBP-type and C3HC4-type zinc finger-containing protein 1 (Ubiquitin- conjugating enzyme 7-interacting protein 3) (RBCC protein interacting with PKC) (Protein kinase C-binding protein beta-15). [Source:Uniprot/SWISSPROT;Acc:Q62921]
16.3054 -19.19 8.1385e-05 1061 10 1 8 [+] picture button

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Download table: GFF TXT
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