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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-15b

1041 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Slc35e1_predicted ENSRNOT00000016355 cofactor required for Sp1 transcriptional activation, subunit 7 [Source:MarkerSymbol;Acc:MGI:1917875]cofactor required for Sp1 transcriptional activation, subunit 7 [Source:MarkerSymbol;Acc:MGI:1917875] BY ORTHOLOGY TO:ENSMUST00000058534
16.1791 -15.61 0.0000000130065 700 17 9 31 [+] picture button
RGD1309550 ENSRNOT00000009120 RGD1309550 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5FWY6]
19.3295 -15 0.0000000201662 185 9 9 31 [+] picture button
RGD1563178_predicted ENSRNOT00000004505 Ectodysplasin-A (Ectodermal dysplasia protein) (EDA protein) [Contains: Ectodysplasin-A, membrane form; Ectodysplasin-A, secreted form]. [Source:Uniprot/SWISSPROT;Acc:Q92838]Ectodysplasin-A (Ectodermal dysplasia protein) (EDA protein) [Contains: Ectodysplasin-A, membrane form; Ectodysplasin-A, secreted form]. [Source:Uniprot/SWISSPROT;Acc:Q92838] BY ORTHOLOGY TO:ENST00000289824
16.8013 -20.45 0.000000042135 700 17 6 31 [+] picture button
O08564-2 ENSRNOT00000013314 LPP1_RAT Isoform 2 of O08564 - Rattus norvegicus (Rat) [Source:Uniprot/Varsplic;Acc:O08564-2]
15.9906 -13.41 0.0000000478065 700 12 8 17 [+] picture button
Q9JK55_RAT ENSRNOT00000028355 Fibroblast growth factor 4 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9JK55]
17.8384 -23.57 0.0000000819118 700 10 7 25 [+] picture button
Ccne1 ENSRNOT00000020014 G1/S-specific cyclin-E1. [Source:Uniprot/SWISSPROT;Acc:P39949]
16.3625 -15.66 0.000000108662 523 14 9 45 [+] picture button
BC039210 ENSRNOT00000018671 cDNA sequence BC039210 [Source:MarkerSymbol;Acc:MGI:3603204]
18.5644 -25.96 0.00000015003 700 24 9 48 [+] picture button
Gpr63_predicted ENSRNOT00000010081 Probable G-protein coupled receptor 63 (PSP24-beta) (PSP24-2). [Source:Uniprot/SWISSPROT;Acc:Q9BZJ6]Probable G-protein coupled receptor 63 (PSP24-beta) (PSP24-2). [Source:Uniprot/SWISSPROT;Acc:Q9BZJ6] BY ORTHOLOGY TO:SINFRUT00000181772
16.3096 -16.75 0.000000227172 700 20 9 50 [+] picture button
Pfkfb4 ENSRNOT00000028039 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 (6PF-2-K/Fru- 2,6-P2ASE testis-type isozyme) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)]. [Source:Uniprot/SWISSPROT;Acc:P25114]
18.5336 -16.86 0.0000003167 295 16 5 49 [+] picture button
RGD1311970_predicted ENSRNOT00000034137 UPF0418 protein C8orf70. [Source:Uniprot/SWISSPROT;Acc:Q96GY0]UPF0418 protein C8orf70. [Source:Uniprot/SWISSPROT;Acc:Q96GY0] BY ORTHOLOGY TO:ENSMODT00000008467
16.263 -14.34 0.000000374035 700 16 5 24 [+] picture button
Fvt1_predicted ENSRNOT00000003728 3-ketodihydrosphingosine reductase precursor (EC 1.1.1.102) (3- dehydrosphinganine reductase) (KDS reductase) (Follicular variant translocation protein 1) (FVT-1). [Source:Uniprot/SWISSPROT;Acc:Q06136]3-ketodihydrosphingosine reductase precursor (EC 1.1.1.102) (3- dehydrosphinganine reductase) (KDS reductase) (Follicular variant translocation protein 1) (FVT-1). [Source:Uniprot/SWISSPROT;Acc:Q06136] BY ORTHOLOGY TO:SINFRUT00000165182
16.2037 -23.82 0.000000396687 1516 15 7 18 [+] picture button
LOC688966 ENSRNOT00000027680 UPF0402 protein K11B4.2. [Source:Uniprot/SWISSPROT;Acc:O45685]UPF0402 protein K11B4.2. [Source:Uniprot/SWISSPROT;Acc:O45685] BY ORTHOLOGY TO:K11B4.2
16.5939 -15.65 0.000000549063 700 19 2 36 [+] picture button
Wee1 ENSRNOT00000013362 Wee1-like protein kinase (EC 2.7.10.2) (Wee1A kinase). [Source:Uniprot/SWISSPROT;Acc:Q63802]
16.3286 -23.09 0.000000636378 1120 17 8 34 [+] picture button
Rps6kc1 ENSRNOT00000046336 Ribosomal protein S6 kinase delta-1 (EC 2.7.11.1) (52 kDa ribosomal protein S6 kinase) (Ribosomal S6 kinase-like protein with two PSK domains 118 kDa protein) (SPHK1-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q96S38]Ribosomal protein S6 kinase delta-1 (EC 2.7.11.1) (52 kDa ribosomal protein S6 kinase) (Ribosomal S6 kinase-like protein with two PSK domains 118 kDa protein) (SPHK1-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q96S38] BY ORTHOLOGY TO:SINFRUT00000144656
16.0051 -18.53 0.000000798851 700 22 4 34 [+] picture button
Wipi2 ENSRNOT00000001476 WD repeat domain phosphoinositide-interacting protein 2 (WIPI-2). [Source:Uniprot/SWISSPROT;Acc:Q6AY57]
17.1692 -17.35 0.000000841705 182 11 8 34 [+] picture button
Rnf139_predicted ENSRNOT00000011891 TRC8 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9JLC5]
16.8281 -13.06 0.00000103404 150 5 2 17 [+] picture button
LOC680259 ENSRNOT00000022136 Uncharacterized protein C10orf38 precursor (Astroprincin). [Source:Uniprot/SWISSPROT;Acc:Q5VUB5]Uncharacterized protein C10orf38 precursor (Astroprincin). [Source:Uniprot/SWISSPROT;Acc:Q5VUB5] BY ORTHOLOGY TO:ENSPTRT00000004256
17.715 -20.89 0.00000119603 700 18 9 34 [+] picture button
RragB ENSRNOT00000004235 Ras-related GTP-binding protein B (Rag B) (RagB). [Source:Uniprot/SWISSPROT;Acc:Q63487]
16.9208 -15.2 0.00000139318 603 18 6 27 [+] picture button
Q9JKC9-3 ENSRNOT00000055908 SYNG_RAT Isoform 3 of Q9JKC9 - Rattus norvegicus (Rat) [Source:Uniprot/Varsplic;Acc:Q9JKC9-3]
17.7347 -17.69 0.00000173385 700 16 6 33 [+] picture button
Ppp1r11 ENSRNOT00000001013 Protein phosphatase 1 regulatory subunit 11. [Source:Uniprot/SWISSPROT;Acc:Q6MFY6]
16.8206 -19.68 0.00000219087 989 12 5 19 [+] picture button
PENK_RAT ENSRNOT00000011892 Proenkephalin A precursor [Contains: Synenkephalin; Met-enkephalin (Opioid growth factor) (OGF); Met-enkephalin-Arg-Gly-Leu; Leu- enkephalin; Met-enkephalin-Arg-Phe]. [Source:Uniprot/SWISSPROT;Acc:P04094]
19.1167 -18.34 0.00000239141 314 18 8 53 [+] picture button
Bfar ENSRNOT00000004217 Bifunctional apoptosis regulator. [Source:Uniprot/SWISSPROT;Acc:Q5PQN2]
16.8213 -21.04 0.00000247911 700 14 7 19 [+] picture button
Fzd6 ENSRNOT00000006195 FZ6-like protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8CFA9]
16.0401 -9.88 0.00000269014 700 21 2 27 [+] picture button
Asb1_predicted ENSRNOT00000027528 Ankyrin repeat and SOCS box protein 1 (ASB-1). [Source:Uniprot/SWISSPROT;Acc:Q9Y576]Ankyrin repeat and SOCS box protein 1 (ASB-1). [Source:Uniprot/SWISSPROT;Acc:Q9Y576] BY ORTHOLOGY TO:ENSGALT00000006793
15.8679 -17.03 0.00000341953 700 15 4 32 [+] picture button
RGD1560367_predicted ENSRNOT00000024939 RNA binding motif protein 6 [Source:MarkerSymbol;Acc:MGI:1338037]RNA binding motif protein 6 [Source:MarkerSymbol;Acc:MGI:1338037] BY ORTHOLOGY TO:ENSMUST00000035201
17.1692 -14.27 0.0000038383 118 9 7 35 [+] picture button
Plekhc1 ENSRNOT00000012400 pleckstrin homology domain containing, family C (with FERM domain) member 1 [Source:RefSeq_peptide;Acc:NP_001011915]
15.9967 -20.35 0.00000395031 1077 12 8 16 [+] picture button
RGD1563246_predicted ENSRNOT00000015395 R-spondin 3 homolog (Xenopus laevis) [Source:MarkerSymbol;Acc:MGI:1920030]R-spondin 3 homolog (Xenopus laevis) [Source:MarkerSymbol;Acc:MGI:1920030] BY ORTHOLOGY TO:ENSMUST00000092623
17.273 -26.14 0.00000398126 1028 12 6 16 [+] picture button
Polr3f_predicted ENSRNOT00000010468 DNA-directed RNA polymerase III subunit F (EC 2.7.7.6) (DNA-directed RNA polymerase III 39 kDa polypeptide) (RNA polymerase III C39 subunit). [Source:Uniprot/SWISSPROT;Acc:Q9H1D9]DNA-directed RNA polymerase III subunit F (EC 2.7.7.6) (DNA-directed RNA polymerase III 39 kDa polypeptide) (RNA polymerase III C39 subunit). [Source:Uniprot/SWISSPROT;Acc:Q9H1D9] BY ORTHOLOGY TO:ENSOANT00000001997
16.6019 -15.67 0.00000438953 750 16 7 24 [+] picture button
Cops2 ENSRNOT00000012287 COP9 signalosome complex subunit 2 (Signalosome subunit 2) (SGN2) (JAB1-containing signalosome subunit 2) (Thyroid receptor-interacting protein 15) (TRIP-15) (Alien homolog). [Source:Uniprot/SWISSPROT;Acc:P61203]
16.3802 -13.89 0.00000452538 585 18 10 29 [+] picture button
Lats2_predicted ENSRNOT00000014031 Serine/threonine-protein kinase LATS2 (EC 2.7.11.1) (Large tumor suppressor homolog 2) (Serine/threonine-protein kinase kpm) (Kinase phosphorylated during mitosis protein) (Warts-like kinase). [Source:Uniprot/SWISSPROT;Acc:Q9NRM7]Serine/threonine-protein kinase LATS2 (EC 2.7.11.1) (Large tumor suppressor homolog 2) (Serine/threonine-protein kinase kpm) (Kinase phosphorylated during mitosis protein) (Warts-like kinase). [Source:Uniprot/SWISSPROT;Acc:Q9NRM7] BY ORTHOLOGY TO:ENSXETT00000021164
15.8679 -20.82 0.0000049316 700 16 7 32 [+] picture button
Otud6b_predicted ENSRNOT00000008725 OTU domain-containing protein 6B. [Source:Uniprot/SWISSPROT;Acc:Q8N6M0]OTU domain-containing protein 6B. [Source:Uniprot/SWISSPROT;Acc:Q8N6M0] BY ORTHOLOGY TO:ENSOANT00000024001
18.0458 -28.72 0.0000053957 700 11 1 15 [+] picture button
Eif2b2 ENSRNOT00000008730 Translation initiation factor eIF-2B subunit beta (eIF-2B GDP-GTP exchange factor subunit beta). [Source:Uniprot/SWISSPROT;Acc:Q62818]
16.9965 -17.47 0.00000620403 369 20 5 75 [+] picture button
Nup188 ENSRNOT00000030996 Nup188 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5RJY5]
16.2336 -11.63 0.00000688477 366 20 7 56 [+] picture button
O08591_RAT ENSRNOT00000039341 Perlecan (Fragment). [Source:Uniprot/SPTREMBL;Acc:O08591]
17.0359 -16.4 0.00000703527 700 16 5 23 [+] picture button
Crtac1 ENSRNOT00000020568 Crtac1 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5EB82]
16.8239 -18.63 0.00000839734 700 16 4 30 [+] picture button
RGD1308616_predicted ENSRNOT00000032624 Uncharacterized protein KIAA0467. [Source:Uniprot/SWISSPROT;Acc:Q5T011]Uncharacterized protein KIAA0467. [Source:Uniprot/SWISSPROT;Acc:Q5T011] BY ORTHOLOGY TO:ENST00000372442
16.1322 -17.49 0.00000839858 700 18 3 36 [+] picture button
Nf2 ENSRNOT00000046803 Merlin (Moesin-ezrin-radixin-like protein) (Neurofibromin-2) (Schwannomin) (Fragment). [Source:Uniprot/SWISSPROT;Acc:Q63648]
16.3605 -20.6 0.00000961699 700 20 3 36 [+] picture button
Atpbd1c ENSRNOT00000001722 protein x 0004 [Source:RefSeq_peptide;Acc:NP_973720]
18.4199 -21.36 0.0000101955 262 14 4 56 [+] picture button
Tada1l ENSRNOT00000058689 Tada1l protein. [Source:Uniprot/SPTREMBL;Acc:Q5BJQ7]
15.9506 -18.66 0.000012586 911 12 8 16 [+] picture button
Sos2 ENSRNOT00000006425 Son of sevenless 1 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9Z1I1]
16.6476 -14.39 0.0000131274 700 20 10 47 [+] picture button
Rapgef6_predicted ENSRNOT00000013245 Rap guanine nucleotide exchange factor 6 (PDZ domain-containing guanine nucleotide exchange factor 2) (PDZ-GEF2) (RA-GEF-2). [Source:Uniprot/SWISSPROT;Acc:Q8TEU7]Rap guanine nucleotide exchange factor 6 (PDZ domain-containing guanine nucleotide exchange factor 2) (PDZ-GEF2) (RA-GEF-2). [Source:Uniprot/SWISSPROT;Acc:Q8TEU7] BY ORTHOLOGY TO:ENSXETT00000018397
16.179 -19.79 0.0000133529 700 11 1 16 [+] picture button
Cdc25a ENSRNOT00000028141 M-phase inducer phosphatase 1 (EC 3.1.3.48) (Dual specificity phosphatase Cdc25A). [Source:Uniprot/SWISSPROT;Acc:P48965]
16.6149 -25.81 0.0000139083 1629 8 4 11 [+] picture button
RGD1565360_predicted ENSRNOT00000002291 holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) [Source:MarkerSymbol;Acc:MGI:894646]holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) [Source:MarkerSymbol;Acc:MGI:894646] BY ORTHOLOGY TO:ENSMUST00000088945
16.179 -17.04 0.000014556 700 23 2 36 [+] picture button
Dll1 ENSRNOT00000019934 Delta-like protein 1 precursor (Drosophila Delta homolog 1) (Delta1). [Source:Uniprot/SWISSPROT;Acc:P97677]
16.1894 -18.18 0.0000160894 700 18 8 31 [+] picture button
Dcun1d4_predicted ENSRNOT00000002945 conserved hypothetical proteinconserved hypothetical protein BY ORTHOLOGY TO:AAEL006847-RA
15.9552 -15.24 0.0000164686 700 19 7 34 [+] picture button
Epha1_predicted ENSRNOT00000024037 Ephrin type-A receptor 1 precursor (EC 2.7.10.1) (Tyrosine-protein kinase receptor EPH). [Source:Uniprot/SWISSPROT;Acc:P21709]Ephrin type-A receptor 1 precursor (EC 2.7.10.1) (Tyrosine-protein kinase receptor EPH). [Source:Uniprot/SWISSPROT;Acc:P21709] BY ORTHOLOGY TO:ENSMODT00000001819
19.6707 -23.9 0.0000172043 255 9 6 37 [+] picture button
Pex13_predicted ENSRNOT00000007853 CG4663-PA [Source:RefSeq_peptide;Acc:NP_610850]CG4663-PA [Source:RefSeq_peptide;Acc:NP_610850] BY ORTHOLOGY TO:CG4663-RA
16.288 -15.8 0.0000176403 427 16 7 37 [+] picture button
Rnf10 ENSRNOT00000001549 RING finger protein 10. [Source:Uniprot/SWISSPROT;Acc:Q5XI59]
19.1021 -18.3 0.0000187459 208 11 5 46 [+] picture button
Helz_predicted ENSRNOT00000030300 zinc finger proteinzinc finger protein BY ORTHOLOGY TO:AAEL008579-RA
16.487 -12.44 0.0000228209 289 15 9 65 [+] picture button
Ap2a1_predicted ENSRNOT00000020304 The apt-4 gene encodes an adaptin: specifically, it encodes an ortholog of the alpha subunit of adaptor protein complex 2 (AP-2). [Source: WormBase]The apt-4 gene encodes an adaptin: specifically, it encodes an ortholog of the alpha subunit of adaptor protein complex 2 (AP-2). [Source: WormBase] BY ORTHOLOGY TO:T20B5.1.1
17.1692 -13.48 0.0000239578 236 15 7 69 [+] picture button

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Download table: GFF TXT
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