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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-124*

740 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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RGD1305208_predicted ENSRNOT00000049210 ALS2 C-terminal like isoform 1 [Source:RefSeq_peptide;Acc:NP_667340]ALS2 C-terminal like isoform 1 [Source:RefSeq_peptide;Acc:NP_667340] BY ORTHOLOGY TO:ENST00000318962
15.5567 -14.18 1e-06 700 16 2 15 [+] picture button
Htatip ENSRNOT00000028110 Histone acetyltransferase HTATIP (EC 2.3.1.48) (EC 2.3.1.-) (60 kDa Tat interactive protein) (Tip60). [Source:Uniprot/SWISSPROT;Acc:Q99MK2]
20.022 -29.76 3.96608e-05 403 20 5 50 [+] picture button
P97660_RAT ENSRNOT00000008889 Zinc finger protein 4 (Fragment). [Source:Uniprot/SPTREMBL;Acc:P97660]
17.0087 -21.85 0.000104516 700 16 3 26 [+] picture button
Ace ENSRNOT00000010627 Angiotensin-converting enzyme, somatic isoform precursor (EC 3.4.15.1) (Dipeptidyl carboxypeptidase I) (Kininase II) [Contains: Angiotensin- converting enzyme, somatic isoform, soluble form]. [Source:Uniprot/SWISSPROT;Acc:P47820]
17.3966 -23.58 0.000158471 216 10 6 35 [+] picture button
Snap91 ENSRNOT00000032792 Clathrin coat assembly protein AP180 (Clathrin coat-associated protein AP180) (91 kDa synaptosomal-associated protein). [Source:Uniprot/SWISSPROT;Acc:Q05140]
17.1918 -22.93 0.000267848 700 18 3 31 [+] picture button
Alox15 ENSRNOT00000026038 Arachidonate 12-lipoxygenase, leukocyte-type (EC 1.13.11.31) (12-LOX). [Source:Uniprot/SWISSPROT;Acc:Q02759]
16.7144 -22.21 0.000300788 191 7 3 25 [+] picture button
Ier3 ENSRNOT00000001099 immediate early response 3 [Source:RefSeq_peptide;Acc:NP_997670]
17.3661 -21.69 0.000384201 582 18 5 28 [+] picture button
RGD1560408_predicted ENSRNOT00000024701 mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isoenzyme A [Source:RefSeq_peptide;Acc:NP_036346]mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isoenzyme A [Source:RefSeq_peptide;Acc:NP_036346] BY ORTHOLOGY TO:ENSXETT00000042031
16.7593 -12.89 0.000507289 372 15 8 39 [+] picture button
Rfx3 ENSRNOT00000019515 regulatory factor X, 3 (influences HLA class II expression) [Source:RefSeq_peptide;Acc:NP_001012172]
16.6007 -16.16 0.000581153 291 14 1 39 [+] picture button
Rfx3 ENSRNOT00000054769 regulatory factor X, 3 (influences HLA class II expression) [Source:RefSeq_peptide;Acc:NP_001012172]
16.5634 -16.16 0.000625449 306 17 4 59 [+] picture button
Htatip ENSRNOT00000041916 Histone acetyltransferase HTATIP (EC 2.3.1.48) (EC 2.3.1.-) (60 kDa Tat interactive protein) (Tip60). [Source:Uniprot/SWISSPROT;Acc:Q99MK2]
20.0385 -29.76 0.000683442 400 18 1 30 [+] picture button
RGD1311605_predicted ENSRNOT00000008555 Apoptosis-related protein 3 precursor (APR-3) (p18). [Source:Uniprot/SWISSPROT;Acc:Q6UW56]Apoptosis-related protein 3 precursor (APR-3) (p18). [Source:Uniprot/SWISSPROT;Acc:Q6UW56] BY ORTHOLOGY TO:ENSGACT00000014197
17.7377 -22.76 0.000727957 253 13 5 41 [+] picture button
B4galnt1 ENSRNOT00000006603 Beta-1,4 N-acetylgalactosaminyltransferase 1 (EC 2.4.1.92) ((N- acetylneuraminyl)-galactosylglucosylceramide) (GM2/GD2 synthase) (GalNAc-T). [Source:Uniprot/SWISSPROT;Acc:Q10468]
16.1686 -15.77 0.000877822 495 18 4 22 [+] picture button
RGD1561880_predicted ENSRNOT00000054954 Anaphase-promoting complex subunit 11 (APC11) (Cyclosome subunit 11) (Hepatocellular carcinoma-associated RING finger protein). [Source:Uniprot/SWISSPROT;Acc:Q9NYG5]Anaphase-promoting complex subunit 11 (APC11) (Cyclosome subunit 11) (Hepatocellular carcinoma-associated RING finger protein). [Source:Uniprot/SWISSPROT;Acc:Q9NYG5] BY ORTHOLOGY TO:ENSGACT00000024073
20.0571 -24.03 0.000914207 359 15 3 37 [+] picture button
Otog_predicted ENSRNOT00000056118 NOT ANNOTATED
16.8044 -20.21 0.000918859 700 17 1 31 [+] picture button
Slamf9_predicted ENSRNOT00000010594 SLAM family member 9 precursor (CD2 family member 10) (CD2F-10) (CD84 homolog 1) (CD84-H1). [Source:Uniprot/SWISSPROT;Acc:Q96A28]SLAM family member 9 precursor (CD2 family member 10) (CD2F-10) (CD84 homolog 1) (CD84-H1). [Source:Uniprot/SWISSPROT;Acc:Q96A28] BY ORTHOLOGY TO:ENSMMUT00000006648
17.2829 -11.73 0.00100923 148 7 5 17 [+] picture button
ENSRNOT00000055266 NOT ANNOTATED
17.7347 -27.2 0.00106743 700 12 1 12 [+] picture button
Rhbdf1 ENSRNOT00000027965 rhomboid family 1 [Source:RefSeq_peptide;Acc:NP_001025205]
17.2829 -14.73 0.00113916 227 10 8 35 [+] picture button
Ka17 ENSRNOT00000005382 type I keratin KA17 [Source:RefSeq_peptide;Acc:NP_997710]
17.9651 -15.2 0.0012837 193 10 3 32 [+] picture button
RGD1306682_predicted ENSRNOT00000009485 CG15456-PA [Source:RefSeq_peptide;Acc:NP_652292]CG15456-PA [Source:RefSeq_peptide;Acc:NP_652292] BY ORTHOLOGY TO:CG15456-RA
15.5855 -13.43 0.0013101 386 18 4 42 [+] picture button
Zfp641_predicted ENSRNOT00000045473 zinc finger protein 641 [Source:RefSeq_peptide;Acc:NP_689533]zinc finger protein 641 [Source:RefSeq_peptide;Acc:NP_689533] BY ORTHOLOGY TO:ENSCAFT00000014313
16.1779 -17.05 0.00131412 700 17 4 26 [+] picture button
Acbd4 ENSRNOT00000004163 Acyl-CoA-binding domain-containing protein 4. [Source:Uniprot/SWISSPROT;Acc:Q6DGF9]
16.0615 -16.64 0.00134355 517 16 6 31 [+] picture button
Chsy1_predicted ENSRNOT00000016939 Chondroitin synthase (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8WNX6]Chondroitin synthase (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8WNX6] BY ORTHOLOGY TO:ENSBTAT00000009678
18.3711 -19.56 0.00143717 700 15 5 18 [+] picture button
Megf10 ENSRNOT00000037901 Rattus norvegicus (clone REM4) ORF (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q63404]
16.7225 -29.11 0.00146609 700 14 2 21 [+] picture button
ENSRNOT00000057536 NOT ANNOTATED
16.8366 -21.66 0.00149984 700 6 1 10 [+] picture button
Prkcz ENSRNOT00000021285 protein kinase C, zeta (Prkcz), mRNA [Source:RefSeq_dna;Acc:NM_022507]
16.8013 -28.08 0.00157718 700 16 3 28 [+] picture button
ENSRNOT00000055693 NOT ANNOTATED
16.0753 -14.93 0.001601 700 12 1 11 [+] picture button
Arfgap1 ENSRNOT00000014858 ADP-ribosylation factor GTPase-activating protein 1 (ADP-ribosylation factor 1 GTPase-activating protein) (ARF1 GAP) (ARF1-directed GTPase- activating protein) (GAP protein). [Source:Uniprot/SWISSPROT;Acc:Q62848]
17.2161 -22.1 0.001601 700 20 1 23 [+] picture button
Zfp74 ENSRNOT00000034158 Zinc finger protein 5 (Fragment). [Source:Uniprot/SPTREMBL;Acc:P97661]
17.8514 -21.66 0.00177506 72 4 2 10 [+] picture button
Mtdh ENSRNOT00000009989 Protein LYRIC (Lysine-rich CEACAM1 co-isolated protein) (Metastasis adhesion protein) (Metadherin). [Source:Uniprot/SWISSPROT;Acc:Q9Z1W6]
16.487 -17.37 0.00177506 172 6 6 15 [+] picture button
Gpr107_predicted ENSRNOT00000037742 G protein-coupled receptor 107 [Source:RefSeq_peptide;Acc:NP_001025857]G protein-coupled receptor 107 [Source:RefSeq_peptide;Acc:NP_001025857] BY ORTHOLOGY TO:ENSGALT00000006448
16.1459 -17.04 0.00177506 265 14 4 44 [+] picture button
Cd2 ENSRNOT00000021268 T-cell surface antigen CD2 precursor (T-cell surface antigen T11/Leu- 5) (LFA-2) (LFA-3 receptor) (OX-34 antigen). [Source:Uniprot/SWISSPROT;Acc:P08921]
16.8013 -20.56 0.00189057 700 18 2 25 [+] picture button
Fads1 ENSRNOT00000054814 fatty acid desaturase 1 [Source:RefSeq_peptide;Acc:NP_445897]
16.0753 -15.23 0.00195776 700 13 1 12 [+] picture button
RGD1306894_predicted ENSRNOT00000059375 CG34001-PA [Source:RefSeq_peptide;Acc:NP_001033999]CG34001-PA [Source:RefSeq_peptide;Acc:NP_001033999] BY ORTHOLOGY TO:CG34001-RA
16.6976 -24.13 0.00195776 700 10 2 10 [+] picture button
MGC94190 ENSRNOT00000049159 similar to 0610007L01Rik protein (MGC94190), mRNA [Source:RefSeq_dna;Acc:NM_001004204]
16.487 -19.57 0.00201752 134 8 6 18 [+] picture button
Rnase6 ENSRNOT00000033739 ribonuclease, RNase A family, 6 [Source:RefSeq_peptide;Acc:NP_996538]
16.8363 -22.05 0.00208208 700 16 4 24 [+] picture button
Acy3 ENSRNOT00000024112 aspartoacylase-3 [Source:RefSeq_peptide;Acc:NP_001009603]
16.1459 -13.42 0.00211737 156 8 4 24 [+] picture button
LOC680378 ENSRNOT00000040789 NOT ANNOTATED
15.9304 -19.84 0.00212445 700 10 1 11 [+] picture button
Sema4a ENSRNOT00000026733 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A [Source:RefSeq_peptide;Acc:NP_001012078]
17.1571 -18.47 0.00216279 644 17 4 23 [+] picture button
RGD1311293 ENSRNOT00000059765 similar to CDNA sequence BC034204 (RGD1311293), mRNA [Source:RefSeq_dna;Acc:NM_001025010]
16.6142 -17.06 0.00224608 512 23 6 43 [+] picture button
Ecm1 ENSRNOT00000028740 Extracellular matrix protein 1 precursor (Secretory component P85). [Source:Uniprot/SWISSPROT;Acc:Q62894]
16.6007 -11.13 0.0022631 93 3 4 10 [+] picture button
ENSRNOT00000048860 NOT ANNOTATED
17.8624 -29.85 0.00229576 700 11 1 15 [+] picture button
ENSRNOT00000061990 NOT ANNOTATED
16.5123 -19.84 0.00229576 700 12 1 15 [+] picture button
A2VD13_RAT ENSRNOT00000001306 Pentatricopeptide repeat protein 1. [Source:Uniprot/SWISSPROT;Acc:O75127]Pentatricopeptide repeat protein 1. [Source:Uniprot/SWISSPROT;Acc:O75127] BY ORTHOLOGY TO:ENSBTAT00000027241
16.179 -18.37 0.00239126 700 20 4 31 [+] picture button
Pdcd8 ENSRNOT00000008503 Apoptosis-inducing factor 1, mitochondrial precursor (EC 1.-.-.-) (Programmed cell death protein 8). [Source:Uniprot/SWISSPROT;Acc:Q9JM53]
16.2596 -19.75 0.00246011 176 11 6 40 [+] picture button
Bcam ENSRNOT00000045574 basal cell adhesion molecule [Source:RefSeq_peptide;Acc:NP_113940]
16.2681 -15.24 0.00256672 700 17 6 21 [+] picture button
RGD1560195_predicted ENSRNOT00000001486 transmembrane protein 118 [Source:MarkerSymbol;Acc:MGI:2442859]transmembrane protein 118 [Source:MarkerSymbol;Acc:MGI:2442859] BY ORTHOLOGY TO:ENSMUST00000072529
16.0753 -18.64 0.00257118 700 8 2 15 [+] picture button
Eif4ebp1 ENSRNOT00000016885 Eukaryotic translation initiation factor 4E-binding protein 1 (4E-BP1) (eIF4E-binding protein 1) (Phosphorylated heat- and acid-stable protein regulated by insulin 1) (PHAS-I). [Source:Uniprot/SWISSPROT;Acc:Q62622]
16.4058 -22.43 0.00263208 425 21 4 49 [+] picture button
Chga ENSRNOT00000057388 chromogranin A [Source:MarkerSymbol;Acc:MGI:88394]
15.5567 -15.46 0.0026369 700 15 6 23 [+] picture button
A530016L24Rik ENSRNOT00000017504 RIKEN cDNA A530016L24 gene [Source:MarkerSymbol;Acc:MGI:2443020]
16.9328 -22.53 0.0026731 700 17 2 21 [+] picture button

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Download table: GFF TXT
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