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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-122

783 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Mon2 ENSRNOT00000045130 Mon2 protein. [Source:Uniprot/SPTREMBL;Acc:Q3KR70]
16.4901 -18.77 1.04683e-08 700 19 11 33 [+] picture button
Bcat2 ENSRNOT00000028474 Branched-chain-amino-acid aminotransferase, mitochondrial precursor (EC 2.6.1.42) (BCAT(m)). [Source:Uniprot/SWISSPROT;Acc:O35854]
18.3796 -21.13 1.56291e-08 357 17 7 40 [+] picture button
Clcn3 ENSRNOT00000014845 Chloride channel protein 3 (ClC-3). [Source:Uniprot/SWISSPROT;Acc:P51792]
16.4949 -21.21 2.409e-07 700 21 8 30 [+] picture button
RGD1560410_predicted ENSRNOT00000047380 similar to G protein-coupled receptor 172B [Source:RefSeq_peptide;Acc:NP_001069369]similar to G protein-coupled receptor 172B [Source:RefSeq_peptide;Acc:NP_001069369] BY ORTHOLOGY TO:ENSBTAT00000001142
16.5939 -19.65 2.57474e-07 700 19 4 31 [+] picture button
Clic1 ENSRNOT00000042972 chloride intracellular channel 1 [Source:RefSeq_peptide;Acc:NP_001002807]
17.631 -20.33 4.20404e-07 700 21 5 32 [+] picture button
Bai2_predicted ENSRNOT00000019547 Brain-specific angiogenesis inhibitor 2 precursor. [Source:Uniprot/SWISSPROT;Acc:O60241]Brain-specific angiogenesis inhibitor 2 precursor. [Source:Uniprot/SWISSPROT;Acc:O60241] BY ORTHOLOGY TO:ENSMMUT00000032928
20.2392 -23.55 4.99246e-07 294 15 6 51 [+] picture button
Ppib ENSRNOT00000022828 Peptidyl-prolyl cis-trans isomerase B precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin B) (S-cyclophilin) (SCYLP) (CYP-S1). [Source:Uniprot/SWISSPROT;Acc:P24368]
16.6007 -22.68 5.11337e-07 213 12 8 36 [+] picture button
LOC686714 ENSRNOT00000032816 RIKEN cDNA 2210415F13 gene [Source:MarkerSymbol;Acc:MGI:1917413]RIKEN cDNA 2210415F13 gene [Source:MarkerSymbol;Acc:MGI:1917413] BY ORTHOLOGY TO:ENSMUST00000013787
17.6131 -23.48 1e-06 700 17 3 15 [+] picture button
Ptprg ENSRNOT00000048742 protein tyrosine phosphatase, receptor type, G [Source:RefSeq_peptide;Acc:NP_599183]
17.4522 -22.01 1.49358e-06 700 18 12 33 [+] picture button
Sirt6 ENSRNOT00000008758 sirtuin 6 [Source:RefSeq_peptide;Acc:NP_001026819]
16.957 -24.25 1.6922e-06 604 19 5 38 [+] picture button
Papss2_predicted ENSRNOT00000014979 3'-phosphoadenosine 5'-phosphosulfate synthase 2. [Source:Uniprot/SPTREMBL;Acc:Q90XY2]3'-phosphoadenosine 5'-phosphosulfate synthase 2. [Source:Uniprot/SPTREMBL;Acc:Q90XY2] BY ORTHOLOGY TO:SINFRUT00000154154
18.0874 -23.82 2.82361e-06 700 13 3 32 [+] picture button
Gtf2b ENSRNOT00000015032 Transcription initiation factor IIB (General transcription factor TFIIB) (RNA polymerase II alpha initiation factor). [Source:Uniprot/SWISSPROT;Acc:P62916]
17.5103 -24.11 3.44651e-06 266 15 7 41 [+] picture button
RGD1310121_predicted ENSRNOT00000039166 Tubulin polymerization-promoting protein (TPPP) (25 kDa brain-specific protein) (p25-alpha) (p24) (p25). [Source:Uniprot/SWISSPROT;Acc:O94811]Tubulin polymerization-promoting protein (TPPP) (25 kDa brain-specific protein) (p25-alpha) (p24) (p25). [Source:Uniprot/SWISSPROT;Acc:O94811] BY ORTHOLOGY TO:ENSOANT00000017838
16.0322 -15.79 3.76164e-06 87 5 11 24 [+] picture button
Kcnf1 ENSRNOT00000033327 Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1). [Source:Uniprot/SWISSPROT;Acc:Q9H3M0]Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1). [Source:Uniprot/SWISSPROT;Acc:Q9H3M0] BY ORTHOLOGY TO:SINFRUT00000134639
17.0367 -27.18 4.07732e-06 700 18 5 37 [+] picture button
Slc4a3 ENSRNOT00000027337 Anion exchange protein 3 (Neuronal band 3-like protein) (Solute carrier family 4 member 3). [Source:Uniprot/SWISSPROT;Acc:P23348]
17.9651 -19.2 4.52938e-06 159 9 8 33 [+] picture button
Trappc3 ENSRNOT00000014383 Trafficking protein particle complex subunit 3. [Source:Uniprot/SWISSPROT;Acc:Q5U1Z2]
15.9842 -17.39 5.22763e-06 613 20 7 39 [+] picture button
St6gal1 ENSRNOT00000002499 CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,6-sialyltransferase (EC 2.4.99.1) (Beta-galactoside alpha-2,6-sialyltransferase) (Alpha 2,6-ST) (Sialyltransferase 1) (ST6Gal I). [Source:Uniprot/SWISSPROT;Acc:P13721]
16.487 -18.26 6.56818e-06 251 14 4 43 [+] picture button
Tgfbi ENSRNOT00000016390 Transforming growth factor-beta-induced protein ig-h3 precursor (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP). [Source:Uniprot/SWISSPROT;Acc:Q15582]Transforming growth factor-beta-induced protein ig-h3 precursor (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP). [Source:Uniprot/SWISSPROT;Acc:Q15582] BY ORTHOLOGY TO:ENSOANT00000013282
16.9423 -21.69 9.85454e-06 609 22 7 36 [+] picture button
LOC682844 ENSRNOT00000010263 similar to nucleosome assembly protein 1-like 5 (MGC105733), mRNA [Source:RefSeq_dna;Acc:NM_001044293]
18.1949 -28.23 1.0618e-05 1018 16 4 20 [+] picture button
Cd320 ENSRNOT00000009067 CD320 antigen [Source:RefSeq_peptide;Acc:NP_001014223]
16.3383 -16.41 1.19074e-05 325 14 6 45 [+] picture button
Cpeb1_predicted ENSRNOT00000026009 Cytoplasmic polyadenylation element-binding protein 1 (CPE-binding protein 1) (CPE-BP1) (CPEB-1) (CPEB). [Source:Uniprot/SWISSPROT;Acc:P0C279]
16.4459 -16.07 1.20624e-05 700 18 7 30 [+] picture button
RGD1307844_predicted ENSRNOT00000026106 Trafficking kinesin-binding protein 1 (106 kDa O-GlcNAc transferase- interacting protein). [Source:Uniprot/SWISSPROT;Acc:Q9UPV9]Trafficking kinesin-binding protein 1 (106 kDa O-GlcNAc transferase- interacting protein). [Source:Uniprot/SWISSPROT;Acc:Q9UPV9] BY ORTHOLOGY TO:ENSGALT00000019473
17.3136 -15.54 1.26302e-05 700 16 4 24 [+] picture button
Lyar ENSRNOT00000007154 Cell growth-regulating nucleolar protein. [Source:Uniprot/SWISSPROT;Acc:Q6AYK5]
17.9651 -20.68 1.41662e-05 169 5 4 23 [+] picture button
Dullard ENSRNOT00000023379 Dullard protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q3B7T6]
17.3121 -21.35 1.47632e-05 572 19 7 35 [+] picture button
Igfbp1 ENSRNOT00000057114 Insulin-like growth factor-binding protein 1 precursor (IGFBP-1) (IBP- 1) (IGF-binding protein 1). [Source:Uniprot/SWISSPROT;Acc:P21743]
16.4901 -21.18 1.66482e-05 700 20 5 23 [+] picture button
Pir ENSRNOT00000004884 Pirin. [Source:Uniprot/SWISSPROT;Acc:Q5M827]
16.5593 -18.5 1.68989e-05 497 14 3 30 [+] picture button
Cltc ENSRNOT00000055800 Clathrin heavy chain. [Source:Uniprot/SWISSPROT;Acc:P11442]
17.4305 -22.75 1.76418e-05 943 12 10 16 [+] picture button
LOC687772 ENSRNOT00000025412 Ribonuclease P protein subunit p30 (EC 3.1.26.5) (RNaseP protein p30) (RNase P subunit 2). [Source:Uniprot/SWISSPROT;Acc:P78346]Ribonuclease P protein subunit p30 (EC 3.1.26.5) (RNaseP protein p30) (RNase P subunit 2). [Source:Uniprot/SWISSPROT;Acc:P78346] BY ORTHOLOGY TO:ENSMMUT00000009271
16.6262 -20.05 2.69657e-05 700 20 5 28 [+] picture button
Atp13a2 ENSRNOT00000010884 ATPase type 13A2 [Source:MarkerSymbol;Acc:MGI:1922022]
16.905 -20.13 3.17857e-05 700 16 5 21 [+] picture button
RGD1311900_predicted ENSRNOT00000017386 tetracycline transporter-like protein [Source:RefSeq_peptide;Acc:NP_001111]tetracycline transporter-like protein [Source:RefSeq_peptide;Acc:NP_001111] BY ORTHOLOGY TO:ENSGALT00000025237
17.624 -18.56 3.25941e-05 234 14 4 44 [+] picture button
Hif3a ENSRNOT00000023490 Hypoxia-inducible factor 3 alpha (HIF-3 alpha) (HIF3 alpha 1). [Source:Uniprot/SWISSPROT;Acc:Q9JHS2]
16.7144 -20.67 3.83265e-05 73 3 5 11 [+] picture button
COMD3_RAT ENSRNOT00000022201 COMM domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q6P9U3]
16.8281 -11.72 4.28479e-05 294 14 7 51 [+] picture button
Spon2 ENSRNOT00000008262 Spondin-2 precursor (Mindin). [Source:Uniprot/SWISSPROT;Acc:Q9WV75]
16.6976 -19.28 4.58781e-05 700 15 3 22 [+] picture button
Hace1_predicted ENSRNOT00000000365 E3 ubiquitin-protein ligase HACE1 (EC 6.3.2.-) (HECT domain and ankyrin repeat-containing E3 ubiquitin-protein ligase 1). [Source:Uniprot/SWISSPROT;Acc:Q8IYU2]E3 ubiquitin-protein ligase HACE1 (EC 6.3.2.-) (HECT domain and ankyrin repeat-containing E3 ubiquitin-protein ligase 1). [Source:Uniprot/SWISSPROT;Acc:Q8IYU2] BY ORTHOLOGY TO:ENSOANT00000016348
16.0799 -13.99 4.96661e-05 700 17 4 23 [+] picture button
RGD1305593_predicted ENSRNOT00000001716 Uncharacterized protein C7orf48. [Source:Uniprot/SWISSPROT;Acc:Q9BT73]Uncharacterized protein C7orf48. [Source:Uniprot/SWISSPROT;Acc:Q9BT73] BY ORTHOLOGY TO:SINFRUT00000142387
16.2473 -18.6 5.03946e-05 302 17 4 78 [+] picture button
Dgkz ENSRNOT00000024280 Diacylglycerol kinase zeta (EC 2.7.1.107) (Diglyceride kinase zeta) (DGK-zeta) (DAG kinase zeta) (DGK-IV) (104 kDa diacylglycerol kinase). [Source:Uniprot/SWISSPROT;Acc:O08560]
16.1806 -16.95 5.16457e-05 581 22 6 33 [+] picture button
Lrp10 ENSRNOT00000015468 low-density lipoprotein receptor-related protein 10 [Source:RefSeq_peptide;Acc:NP_001032866]
16.7198 -19.24 6.02427e-05 380 16 7 38 [+] picture button
Pcdh11x_predicted ENSRNOT00000045001 Protocadherin-11 Y-linked precursor (Protocadherin-11) (Protocadherin- 22) (Protocadherin on the Y chromosome) (PCDH-Y) (Protocadherin prostate cancer) (Protocadherin-PC). [Source:Uniprot/SWISSPROT;Acc:Q9BZA8]Protocadherin-11 Y-linked precursor (Protocadherin-11) (Protocadherin- 22) (Protocadherin on the Y chromosome) (PCDH-Y) (Protocadherin prostate cancer) (Protocadherin-PC). [Source:Uniprot/SWISSPROT;Acc:Q9BZA8] BY ORTHOLOGY TO:SINFRUT00000133023
15.9716 -20.94 7.02934e-05 700 16 3 19 [+] picture button
Kctd13 ENSRNOT00000027129 potassium channel tetramerisation domain containing 13 [Source:RefSeq_peptide;Acc:NP_942031]
16.1192 -23.47 7.5805e-05 532 12 8 25 [+] picture button
Xrn2_predicted ENSRNOT00000016351 5'-3' exoribonuclease 2 [Source:MarkerSymbol;Acc:MGI:894687]5'-3' exoribonuclease 2 [Source:MarkerSymbol;Acc:MGI:894687] BY ORTHOLOGY TO:ENSMUST00000028921
15.9765 -19.57 8.58414e-05 457 19 9 44 [+] picture button
Eml3 ENSRNOT00000026938 echinoderm microtubule associated protein like 3 [Source:MarkerSymbol;Acc:MGI:2387612]
16.7144 -11.82 8.62296e-05 240 14 7 50 [+] picture button
LOC687978 ENSRNOT00000028271 Similar to glycogen synthase 1, muscle. [Source:Uniprot/SPTREMBL;Acc:A2RRU1]
16.4901 -19.66 9.59302e-05 700 15 4 26 [+] picture button
LOC690603 ENSRNOT00000025489 Kallikrein-5 precursor (EC 3.4.21.-) (Stratum corneum tryptic enzyme) (Kallikrein-like protein 2) (KLK-L2). [Source:Uniprot/SWISSPROT;Acc:Q9Y337]Kallikrein-5 precursor (EC 3.4.21.-) (Stratum corneum tryptic enzyme) (Kallikrein-like protein 2) (KLK-L2). [Source:Uniprot/SWISSPROT;Acc:Q9Y337] BY ORTHOLOGY TO:ENSMMUT00000038395
16.1462 -19.46 9.62593e-05 700 17 7 31 [+] picture button
Igfbp1 ENSRNOT00000057112 Insulin-like growth factor-binding protein 1 precursor (IGFBP-1) (IBP- 1) (IGF-binding protein 1). [Source:Uniprot/SWISSPROT;Acc:P21743]
16.905 -19.65 9.95111e-05 700 16 1 15 [+] picture button
Igfbp1 ENSRNOT00000057113 Insulin-like growth factor-binding protein 1 precursor (IGFBP-1) (IBP- 1) (IGF-binding protein 1). [Source:Uniprot/SWISSPROT;Acc:P21743]
16.905 -19.65 9.95111e-05 700 16 1 15 [+] picture button
Iqgap1_predicted ENSRNOT00000018021 Ras GTPase-activating-like protein IQGAP1 (p195). [Source:Uniprot/SWISSPROT;Acc:P46940]Ras GTPase-activating-like protein IQGAP1 (p195). [Source:Uniprot/SWISSPROT;Acc:P46940] BY ORTHOLOGY TO:ENSMMUT00000016652
16.6976 -20.94 0.000106539 700 16 4 25 [+] picture button
LOC687099 ENSRNOT00000032076 retinol dehydrogenase 8 (all-trans) [Source:RefSeq_peptide;Acc:NP_056540]retinol dehydrogenase 8 (all-trans) [Source:RefSeq_peptide;Acc:NP_056540] BY ORTHOLOGY TO:ENSXETT00000047722
15.8954 -17.09 0.000131199 700 17 2 34 [+] picture button
RGD1566234_predicted ENSRNOT00000044726 Growth factor receptor-bound protein 10 (GRB10 adaptor protein) (Insulin receptor-binding protein GRB-IR). [Source:Uniprot/SWISSPROT;Acc:Q13322]Growth factor receptor-bound protein 10 (GRB10 adaptor protein) (Insulin receptor-binding protein GRB-IR). [Source:Uniprot/SWISSPROT;Acc:Q13322] BY ORTHOLOGY TO:SINFRUT00000169116
15.9036 -14.52 0.0001327 700 13 4 22 [+] picture button
Tbc1d10b_predicted ENSRNOT00000023706 TBC1 domain family, member 10B [Source:RefSeq_peptide;Acc:NP_056342]TBC1 domain family, member 10B [Source:RefSeq_peptide;Acc:NP_056342] BY ORTHOLOGY TO:ENSCAFT00000026806
18.5659 -24.64 0.000135222 779 15 7 25 [+] picture button
RGD1559717_predicted ENSRNOT00000009530 hypothetical protein LOC525332 [Source:RefSeq_peptide;Acc:NP_001069337]hypothetical protein LOC525332 [Source:RefSeq_peptide;Acc:NP_001069337] BY ORTHOLOGY TO:ENSBTAT00000022924
17.624 -18.75 0.00014582 231 11 3 36 [+] picture button

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Download table: GFF TXT
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