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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-106b

1037 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Dock4 ENSRNOT00000006709 dedicator of cytokinesis 4 [Source:MarkerSymbol;Acc:MGI:1918006]
15.8527 -15.25 0.000000000183755 1845 8 6 13 [+] picture button
RGD1306344 ENSRNOT00000055127 similar to Ab1-133 (RGD1306344), mRNA [Source:RefSeq_dna;Acc:NM_001047860]
17.4038 -23.49 0.00000000268326 700 23 8 43 [+] picture button
Bambi ENSRNOT00000021801 BMP and activin membrane-bound inhibitor homolog precursor (Kinase- deficient TGFbeta superfamily receptor subunit). [Source:Uniprot/SWISSPROT;Acc:Q91XN4]
16.8119 -16.19 0.00000000289649 357 17 14 45 [+] picture button
Rsnl2 ENSRNOT00000011810 CAP-Gly domain-containing linker protein 4 (Restin-like protein 2). [Source:Uniprot/SWISSPROT;Acc:Q66HD5]
16.1455 -11.27 0.0000000129349 700 18 12 44 [+] picture button
LOC683642 ENSRNOT00000013260 RIKEN cDNA D930015E06 gene [Source:MarkerSymbol;Acc:MGI:2443399]RIKEN cDNA D930015E06 gene [Source:MarkerSymbol;Acc:MGI:2443399] BY ORTHOLOGY TO:ENSMUST00000052342
16.2222 -15.67 0.0000000182526 700 22 10 40 [+] picture button
LOC301334 ENSRNOT00000018935 Rho guanine nucleotide exchange factor 4 (APC-stimulated guanine nucleotide exchange factor) (Asef). [Source:Uniprot/SWISSPROT;Acc:Q9NR80]Rho guanine nucleotide exchange factor 4 (APC-stimulated guanine nucleotide exchange factor) (Asef). [Source:Uniprot/SWISSPROT;Acc:Q9NR80] BY ORTHOLOGY TO:ENSPTRT00000023127
17.0912 -19.15 0.000000022527 700 23 5 44 [+] picture button
Hs3st5_predicted ENSRNOT00000000743 heparan sulphate sulfotransferaseheparan sulphate sulfotransferase BY ORTHOLOGY TO:AAEL001458-RA
15.7364 -12.16 0.0000000326774 700 16 9 32 [+] picture button
RGD1564528_predicted ENSRNOT00000026724 mesenchymal stem cell protein DSC54 [Source:RefSeq_peptide;Acc:NP_057728]mesenchymal stem cell protein DSC54 [Source:RefSeq_peptide;Acc:NP_057728] BY ORTHOLOGY TO:ENSXETT00000010187
15.7576 -11.2 0.0000000386629 700 18 13 27 [+] picture button
Pfkp ENSRNOT00000023252 6-phosphofructokinase type C (EC 2.7.1.11) (Phosphofructokinase 1) (Phosphohexokinase) (Phosphofructo-1-kinase isozyme C) (PFK-C). [Source:Uniprot/SWISSPROT;Acc:P47860]
15.7745 -15.52 0.0000000559136 299 16 8 56 [+] picture button
Pde3b ENSRNOT00000015498 cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B) (CGIPDE1). [Source:Uniprot/SWISSPROT;Acc:Q63085]
15.8998 -18.65 0.00000005635 990 8 11 15 [+] picture button
Q80YF3_RAT ENSRNOT00000009693 Mixed-lineage kinase 1 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q80YF3]
18.4036 -22.21 0.0000000695417 207 11 8 44 [+] picture button
Wee1 ENSRNOT00000013362 Wee1-like protein kinase (EC 2.7.10.2) (Wee1A kinase). [Source:Uniprot/SWISSPROT;Acc:Q63802]
16.5036 -20.68 0.0000000837752 1120 17 8 34 [+] picture button
RGD1565078_predicted ENSRNOT00000059063 Zinc finger CCCH-type-containing protein 12C (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9C0D7]Zinc finger CCCH-type-containing protein 12C (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9C0D7] BY ORTHOLOGY TO:ENSOANT00000009992
16.1532 -18.16 0.000000142 700 18 7 35 [+] picture button
Gab1_predicted ENSRNOT00000024390 GRB2-associated-binding protein 1 (GRB2-associated binder 1). [Source:Uniprot/SWISSPROT;Acc:Q13480]GRB2-associated-binding protein 1 (GRB2-associated binder 1). [Source:Uniprot/SWISSPROT;Acc:Q13480] BY ORTHOLOGY TO:ENSORLT00000009187
16.1532 -16.75 0.000000160616 700 12 8 17 [+] picture button
2210018M11Rik ENSRNOT00000043788 RIKEN cDNA 2210018M11 gene [Source:MarkerSymbol;Acc:MGI:1924203]
16.3269 -21.78 0.00000018608 700 14 7 31 [+] picture button
Rnf6_predicted ENSRNOT00000001282 RING finger protein 6 (RING-H2 protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y252]RING finger protein 6 (RING-H2 protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y252] BY ORTHOLOGY TO:ENSPTRT00000010539
18.0606 -15.01 0.000000221901 303 13 8 50 [+] picture button
Map3k2 ENSRNOT00000018975 Mitogen activated serine/threonine protein kinase MEKK2 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8R4A9]
16.6459 -11.24 0.000000408147 700 17 7 22 [+] picture button
RGD1560731_predicted ENSRNOT00000001733 Probable G-protein coupled receptor 146 (G-protein coupled receptor PGR8). [Source:Uniprot/SWISSPROT;Acc:Q96CH1]Probable G-protein coupled receptor 146 (G-protein coupled receptor PGR8). [Source:Uniprot/SWISSPROT;Acc:Q96CH1] BY ORTHOLOGY TO:ENSXETT00000046667
17.0912 -21.51 0.000000422055 700 15 4 33 [+] picture button
Tle4 ENSRNOT00000018272 Transducin-like enhancer protein 4 (Protein ESP2). [Source:Uniprot/SWISSPROT;Acc:Q07141]
18.5179 -22.98 0.000000586007 144 6 5 42 [+] picture button
Naalad2_predicted ENSRNOT00000007855 N-acetylated alpha-linked acidic dipeptidase 2 [Source:MarkerSymbol;Acc:MGI:1919810]N-acetylated alpha-linked acidic dipeptidase 2 [Source:MarkerSymbol;Acc:MGI:1919810] BY ORTHOLOGY TO:ENSMUST00000001826
17.1208 -16.09 0.000000637039 407 17 5 49 [+] picture button
Nritp ENSRNOT00000023149 Ion transporter protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9QZG1]
16.6363 -15.76 0.000000892529 910 11 8 23 [+] picture button
Fbxl5_predicted ENSRNOT00000007016 Fbxl5 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q2YDQ5]Fbxl5 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q2YDQ5] BY ORTHOLOGY TO:ENSDART00000063186
16.0446 -16.33 0.000000910042 747 18 7 25 [+] picture button
Usp53_predicted ENSRNOT00000019684 Inactive ubiquitin carboxyl-terminal hydrolase 53 (Inactive ubiquitin- specific peptidase 53). [Source:Uniprot/SWISSPROT;Acc:Q70EK8]Inactive ubiquitin carboxyl-terminal hydrolase 53 (Inactive ubiquitin- specific peptidase 53). [Source:Uniprot/SWISSPROT;Acc:Q70EK8] BY ORTHOLOGY TO:SINFRUT00000152651
15.9448 -13.35 0.00000105139 700 14 5 21 [+] picture button
Med6_predicted ENSRNOT00000009483 RNA polymerase transcriptional regulation mediator subunit 6 homolog (Activator-recruited cofactor 33 kDa component) (ARC33) (Renal carcinoma antigen NY-REN-28). [Source:Uniprot/SWISSPROT;Acc:O75586]RNA polymerase transcriptional regulation mediator subunit 6 homolog (Activator-recruited cofactor 33 kDa component) (ARC33) (Renal carcinoma antigen NY-REN-28). [Source:Uniprot/SWISSPROT;Acc:O75586] BY ORTHOLOGY TO:ENSXETT00000004723
16.4293 -15.01 0.00000108781 305 14 4 46 [+] picture button
RGD1559961_predicted ENSRNOT00000003886 myosin head domain containing 1 isoform 1 [Source:RefSeq_peptide;Acc:NP_079385]myosin head domain containing 1 isoform 1 [Source:RefSeq_peptide;Acc:NP_079385] BY ORTHOLOGY TO:ENSOANT00000018253
15.8217 -14.22 0.00000136056 624 23 4 33 [+] picture button
Arid4b ENSRNOT00000010836 AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1). [Source:Uniprot/SWISSPROT;Acc:Q9JKB5]
15.6533 -16.02 0.00000146541 700 19 11 38 [+] picture button
Tnfrsf21_predicted ENSRNOT00000015918 Tumor necrosis factor receptor superfamily member 21 precursor (TNFR- related death receptor 6) (Death receptor 6). [Source:Uniprot/SWISSPROT;Acc:O75509]Tumor necrosis factor receptor superfamily member 21 precursor (TNFR- related death receptor 6) (Death receptor 6). [Source:Uniprot/SWISSPROT;Acc:O75509] BY ORTHOLOGY TO:ENSOANT00000013161
16.4107 -15.42 0.00000154939 700 12 5 20 [+] picture button
RGD1561632_predicted ENSRNOT00000022563 Interleukin-25 precursor (IL-25) (Interleukin-17E) (IL-17E). [Source:Uniprot/SWISSPROT;Acc:Q9H293]Interleukin-25 precursor (IL-25) (Interleukin-17E) (IL-17E). [Source:Uniprot/SWISSPROT;Acc:Q9H293] BY ORTHOLOGY TO:ENSMMUT00000020692
16.5701 -19.22 0.00000155185 700 12 5 22 [+] picture button
Perq1_predicted ENSRNOT00000001912 PERQ amino acid rich, with GYF domain 1 [Source:MarkerSymbol;Acc:MGI:1888677]PERQ amino acid rich, with GYF domain 1 [Source:MarkerSymbol;Acc:MGI:1888677] BY ORTHOLOGY TO:ENSMUST00000031727
16.704 -14.62 0.00000191527 352 16 6 50 [+] picture button
Fgd5_predicted ENSRNOT00000051022 FYVE, RhoGEF and PH domain-containing protein 5 (Zinc finger FYVE domain-containing protein 23). [Source:Uniprot/SWISSPROT;Acc:Q6ZNL6]FYVE, RhoGEF and PH domain-containing protein 5 (Zinc finger FYVE domain-containing protein 23). [Source:Uniprot/SWISSPROT;Acc:Q6ZNL6] BY ORTHOLOGY TO:ENSMODT00000035165
17.508 -17.91 0.00000209056 700 13 7 22 [+] picture button
Pou6f1 ENSRNOT00000049998 POU domain, class 6, transcription factor 1 (Brain-specific homeobox/POU domain protein 5) (Brain-5) (Brn-5 protein). [Source:Uniprot/SWISSPROT;Acc:P56223]
16.4653 -12.28 0.00000225997 359 17 5 54 [+] picture button
Zfyve9_predicted ENSRNOT00000037523 zinc finger, FYVE domain containing 9 [Source:MarkerSymbol;Acc:MGI:2652838]zinc finger, FYVE domain containing 9 [Source:MarkerSymbol;Acc:MGI:2652838] BY ORTHOLOGY TO:ENSMUST00000042185
17.9246 -12.96 0.00000279683 443 14 8 41 [+] picture button
Sar1b ENSRNOT00000006567 SAR1a gene homolog 2 [Source:RefSeq_peptide;Acc:NP_001009622]
17.1711 -14.84 0.00000284468 472 18 10 48 [+] picture button
Bag5 ENSRNOT00000015333 BAG family molecular chaperone regulator 5 (BCL2-associated athanogene 5) (BAG-5). [Source:Uniprot/SWISSPROT;Acc:Q5QJC9]
16.2294 -15.14 0.0000035706 533 15 7 42 [+] picture button
March8 ENSRNOT00000017294 membrane-associated ring finger (C3HC4) 8 [Source:MarkerSymbol;Acc:MGI:1919029]
17.1954 -19.35 0.00000369064 700 14 2 26 [+] picture button
LOC314393 ENSRNOT00000007061 Thyroid receptor-interacting protein 11 (TRIP-11) (Golgi-associated microtubule-binding protein 210) (GMAP-210) (Trip230) (Clonal evolution-related gene on chromosome 14). [Source:Uniprot/SWISSPROT;Acc:Q15643]Thyroid receptor-interacting protein 11 (TRIP-11) (Golgi-associated microtubule-binding protein 210) (GMAP-210) (Trip230) (Clonal evolution-related gene on chromosome 14). [Source:Uniprot/SWISSPROT;Acc:Q15643] BY ORTHOLOGY TO:ENSORLT00000012156
16.3813 -21.01 0.0000037062 700 15 7 29 [+] picture button
Q5BJU4_RAT ENSRNOT00000028119 Osbpl5 protein. [Source:Uniprot/SPTREMBL;Acc:Q5BJU4]
16.3617 -20.25 0.00000372373 700 18 5 26 [+] picture button
RGD1564719_predicted ENSRNOT00000033396 Uncharacterized protein C19orf40. [Source:Uniprot/SWISSPROT;Acc:Q9BTP7]Uncharacterized protein C19orf40. [Source:Uniprot/SWISSPROT;Acc:Q9BTP7] BY ORTHOLOGY TO:ENST00000254262
16.8607 -21.38 0.00000396259 700 15 5 31 [+] picture button
Tor1b ENSRNOT00000009002 torsin family 1, member B [Source:RefSeq_peptide;Acc:NP_001034286]
16.8033 -17.89 0.00000498647 175 8 7 34 [+] picture button
Tnks2_predicted ENSRNOT00000039942 Tankyrase-2 (EC 2.4.2.30) (TANK2) (Tankyrase II) (TNKS-2) (TRF1- interacting ankyrin-related ADP-ribose polymerase 2) (Tankyrase-like protein) (Tankyrase-related protein). [Source:Uniprot/SWISSPROT;Acc:Q9H2K2]Tankyrase-2 (EC 2.4.2.30) (TANK2) (Tankyrase II) (TNKS-2) (TRF1- interacting ankyrin-related ADP-ribose polymerase 2) (Tankyrase-like protein) (Tankyrase-related protein). [Source:Uniprot/SWISSPROT;Acc:Q9H2K2] BY ORTHOLOGY TO:ENSMODT00000008519
17.9249 -18.97 0.00000560943 700 18 9 32 [+] picture button
Q8C784-2 ENSRNOT00000036226 CP052_MOUSE Isoform 2 of Q8C784 - Mus musculus (Mouse) [Source:Uniprot/Varsplic;Acc:Q8C784-2]
16.3432 -16.05 0.00000592677 586 13 6 34 [+] picture button
Cript ENSRNOT00000020534 postsynaptic protein Cript (Cript), mRNA [Source:RefSeq_dna;Acc:NM_019907]
16.9184 -16.93 0.00000593601 978 16 3 21 [+] picture button
Trpv6 ENSRNOT00000020616 Transient receptor potential cation channel subfamily V member 6 (TrpV6) (Epithelial calcium channel 2) (ECaC2) (Calcium transport protein 1) (CaT1). [Source:Uniprot/SWISSPROT;Acc:Q9R186]
17.0799 -21.11 0.00000616528 441 16 6 46 [+] picture button
Fts ENSRNOT00000060865 AKT interacting protein [Source:RefSeq_peptide;Acc:NP_001011926]
16.1404 -15.4 0.00000621031 673 16 9 28 [+] picture button
Fbxw11_predicted ENSRNOT00000005874 lin-23 encodes an F-box- and WD-repeat-containing protein orthologous to Saccharomyces cerevisiae MET30 and human beta TRCP (OMIM:603482), both components of the SCF (Skp1, Cullin, F-box) ubiquitin-ligase complex that regulates ubiquitin-mediated protein degradation. LIN-23 negatively regulates postembryonic cell divsions in all tissue types, and specifically, has been shown to function cell autonomously in the vulva to negatively regulate cell cycle progression and allow for cell cycle exit. LIN-23 also functions cell autonomously in some neurons to regulate neurite outgrowth. LIN-23 expression is first detected broadly during gastrulation, with expression continuing postembryonically in body wall and enteric muscle, hypodermal cells, and many but not all neurons. LIN-23 localizes to the cytoplasm. [Source: WormBase]lin-23 encodes an F-box- and WD-repeat-containing protein orthologous to Saccharomyces cerevisiae MET30 and human beta TRCP (OMIM:603482), both components of the SCF (Skp1, Cullin, F-box) ubiquitin-ligase complex that regulates ubiquitin-mediated protein degradation. LIN-23 negatively regulates postembryonic cell divsions in all tissue types, and specifically, has been shown to function cell autonomously in the vulva to negatively regulate cell cycle progression and allow for cell cycle exit. LIN-23 also functions cell autonomously in some neurons to regulate neurite outgrowth. LIN-23 expression is first detected broadly during gastrulation, with expression continuing postembryonically in body wall and enteric muscle, hypodermal cells, and many but not all neurons. LIN-23 localizes to the cytoplasm. [Source: WormBase] BY ORTHOLOGY TO:K10B2.1.1
16.9176 -11.34 0.00000649838 172 9 8 35 [+] picture button
Rnf20 ENSRNOT00000059869 ring finger protein 20 [Source:MarkerSymbol;Acc:MGI:1925927]
16.122 -11.93 0.00000778731 889 18 6 27 [+] picture button
RGD1564670_predicted ENSRNOT00000047387 cytoplasmic polyadenylation element binding protein 3 [Source:MarkerSymbol;Acc:MGI:2443075]cytoplasmic polyadenylation element binding protein 3 [Source:MarkerSymbol;Acc:MGI:2443075] BY ORTHOLOGY TO:ENSMUST00000079754
15.5943 -14.08 0.00000834312 700 14 7 27 [+] picture button
Lrriq2_predicted ENSRNOT00000002191 Leucine-rich repeat and IQ domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q8IW35]Leucine-rich repeat and IQ domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q8IW35] BY ORTHOLOGY TO:ENSMMUT00000009163
15.9441 -9.95 0.0000083767 700 17 6 49 [+] picture button
Cdc6_predicted ENSRNOT00000038228 hypothetical protein LOC402825 (LOC402825), misc RNA [Source:RefSeq_dna;Acc:XR_029804]hypothetical protein LOC402825 (LOC402825), misc RNA [Source:RefSeq_dna;Acc:XR_029804] BY ORTHOLOGY TO:ENSDART00000011657
16.0204 -19.29 0.000010372 700 17 2 23 [+] picture button
Uchl1 ENSRNOT00000059350 Ubiquitin carboxyl-terminal hydrolase isozyme L1 (EC 3.4.19.12) (EC 6.-.-.-) (UCH-L1) (Ubiquitin thioesterase L1) (Neuron cytoplasmic protein 9.5) (PGP 9.5) (PGP9.5). [Source:Uniprot/SWISSPROT;Acc:Q00981]
15.8406 -18.4 0.0000104685 700 17 7 26 [+] picture button

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Download table: GFF TXT
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