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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-101a*

739 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Ckap2_predicted ENSRNOT00000043115 NOT ANNOTATED
15.8679 -25.55 1e-06 700 22 1 18 [+] picture button
Foxa3 ENSRNOT00000019219 Hepatocyte nuclear factor 3-gamma (HNF-3G) (Forkhead box protein A3). [Source:Uniprot/SWISSPROT;Acc:P32183]
19.5244 -28.94 1.56145e-06 355 16 6 44 [+] picture button
Afg3l1_predicted ENSRNOT00000030399 PREDICTED: Pan troglodytes similar to ATP-dependent zinc metalloprotease (LOC468083), mRNA. [Source:RefSeq_dna;Acc:XR_023410]PREDICTED: Pan troglodytes similar to ATP-dependent zinc metalloprotease (LOC468083), mRNA. [Source:RefSeq_dna;Acc:XR_023410] BY ORTHOLOGY TO:ENSPTRT00000015679
16.7144 -21.26 1.05425e-05 228 9 1 22 [+] picture button
RGD1306939 ENSRNOT00000025440 similar to mKIAA0386 protein (RGD1306939), mRNA [Source:RefSeq_dna;Acc:NM_001014009]
16.9418 -20.28 0.000103773 275 15 1 37 [+] picture button
ENSRNOT00000049162 NOT ANNOTATED
17.4433 -18 0.000118667 700 11 1 18 [+] picture button
RGD1566260_predicted ENSRNOT00000032862 NOT ANNOTATED
17.3998 -8.73 0.000163613 336 14 1 29 [+] picture button
MGC114483 ENSRNOT00000043817 similar to MAGEB3 (MGC114483), mRNA [Source:RefSeq_dna;Acc:NM_001024880]
17.9651 -17.52 0.000165596 188 10 1 32 [+] picture button
LOC686926 ENSRNOT00000043188 LRRGT00175 (LOC689713), mRNA [Source:RefSeq_dna;Acc:NM_001047978]
16.6976 -18.66 0.000513199 700 13 1 14 [+] picture button
LOC691748 ENSRNOT00000044801 NOT ANNOTATED
16.5939 -17.97 0.000513199 700 11 1 9 [+] picture button
RGD1562391_predicted ENSRNOT00000006091 similar to 60S ribosomal protein L17 (L23) (predicted) (RGD1562391_predicted), mRNA [Source:RefSeq_dna;Acc:XR_009283]
16.764 -20.48 0.000555707 700 10 1 9 [+] picture button
LOC314996 ENSRNOT00000010484 C8orfK36 protein. [Source:Uniprot/SPTREMBL;Acc:Q2WGJ6]C8orfK36 protein. [Source:Uniprot/SPTREMBL;Acc:Q2WGJ6] BY ORTHOLOGY TO:ENSMODT00000002420
17.7903 -17.06 0.000561234 653 19 3 25 [+] picture button
LOC310665 ENSRNOT00000056380 Novel protein. [Source:Uniprot/SPTREMBL;Acc:A3KQS4]Novel protein. [Source:Uniprot/SPTREMBL;Acc:A3KQS4] BY ORTHOLOGY TO:ENSDART00000026282
17.2256 -18.19 0.000620115 700 19 3 38 [+] picture button
Atp6v1b1_predicted ENSRNOT00000018303 Vacuolar ATP synthase subunit B, kidney isoform (EC 3.6.3.14) (V- ATPase B1 subunit) (Vacuolar proton pump B isoform 1) (Endomembrane proton pump 58 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:P15313]Vacuolar ATP synthase subunit B, kidney isoform (EC 3.6.3.14) (V- ATPase B1 subunit) (Vacuolar proton pump B isoform 1) (Endomembrane proton pump 58 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:P15313] BY ORTHOLOGY TO:ENST00000234396
16.0322 -12.68 0.000650942 286 15 5 48 [+] picture button
LOC302833 ENSRNOT00000056577 similar to CG2691-PA (LOC302833), mRNA [Source:RefSeq_dna;Acc:XR_007436]
17.1124 -17.51 0.000718585 700 19 3 32 [+] picture button
Upb1 ENSRNOT00000058237 ureidopropionase, beta [Source:MarkerSymbol;Acc:MGI:2143535]
17.1124 -21.3 0.000888623 700 21 2 28 [+] picture button
LOC316820 ENSRNOT00000008135 Ewing's tumor-associated antigen 1 (Ewing's tumour-associated antigen 16). [Source:Uniprot/SWISSPROT;Acc:Q9NY74]Ewing's tumor-associated antigen 1 (Ewing's tumour-associated antigen 16). [Source:Uniprot/SWISSPROT;Acc:Q9NY74] BY ORTHOLOGY TO:ENSXETT00000054959
17.7027 -14.78 0.000930562 323 15 5 40 [+] picture button
Rhebl1 ENSRNOT00000035659 Ras homolog enriched in brain like 1 [Source:RefSeq_peptide;Acc:NP_877977]
16.9519 -13.83 0.00109019 480 21 6 54 [+] picture button
Rapgef3 ENSRNOT00000010295 Rap guanine nucleotide exchange factor 3 (cAMP-regulated guanine nucleotide exchange factor I) (cAMP-GEFI) (Exchange factor directly activated by cAMP 1) (Epac 1). [Source:Uniprot/SWISSPROT;Acc:Q9Z1C8]
16.7397 -25.63 0.00109123 579 16 4 37 [+] picture button
Nfat5_predicted ENSRNOT00000017005 Nuclear factor of activated T-cells 5 (T-cell transcription factor NFAT5) (NF-AT5) (Tonicity-responsive enhancer-binding protein) (TonE- binding protein) (TonEBP). [Source:Uniprot/SWISSPROT;Acc:O94916]Nuclear factor of activated T-cells 5 (T-cell transcription factor NFAT5) (NF-AT5) (Tonicity-responsive enhancer-binding protein) (TonE- binding protein) (TonEBP). [Source:Uniprot/SWISSPROT;Acc:O94916] BY ORTHOLOGY TO:ENSXETT00000038722
17.138 -14.03 0.00109561 700 10 3 12 [+] picture button
RGD1310022 ENSRNOT00000026385 Protein FAM103A1. [Source:Uniprot/SWISSPROT;Acc:Q9BTL3]Protein FAM103A1. [Source:Uniprot/SWISSPROT;Acc:Q9BTL3] BY ORTHOLOGY TO:ENSMMUT00000021721
19.9302 -23.28 0.00115543 311 18 4 42 [+] picture button
Olr1584_predicted ENSRNOT00000004643 olfactory receptor Olr1584 [Source:RefSeq_peptide;Acc:NP_001000081]
16.6668 -18.67 0.00123101 700 14 2 17 [+] picture button
Pnoc ENSRNOT00000019117 Nociceptin precursor [Contains: Neuropeptide 1; Nociceptin (Orphanin FQ) (PPNOC) (ORL1 receptor agonist); Neuropeptide 2]. [Source:Uniprot/SWISSPROT;Acc:Q62923]
19.8238 -21.15 0.00128546 399 17 5 39 [+] picture button
Tmem39b ENSRNOT00000032558 Transmembrane protein 39B. [Source:Uniprot/SWISSPROT;Acc:Q66H44]
15.8123 -13.69 0.00133724 700 17 5 30 [+] picture button
Zfp7 ENSRNOT00000040896 zinc finger protein 7 [Source:MarkerSymbol;Acc:MGI:99208]
17.2161 -26.96 0.00140103 700 13 1 15 [+] picture button
RGD1559531_predicted ENSRNOT00000048673 NOT ANNOTATED
16.1371 -16.33 0.00152338 700 11 1 16 [+] picture button
Ptk2b ENSRNOT00000030036 Protein tyrosine kinase 2 beta (EC 2.7.10.2) (Focal adhesion kinase 2) (FADK 2) (Proline-rich tyrosine kinase 2) (Cell adhesion kinase beta) (CAK beta) (Calcium-dependent tyrosine kinase) (CADTK). [Source:Uniprot/SWISSPROT;Acc:P70600]
19.557 -18.65 0.00167954 285 15 1 38 [+] picture button
Klhl12 ENSRNOT00000005832 Kelch-like protein 12 (CUL3-interacting protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8R2H4]
19.557 -27.57 0.00167954 130 7 3 29 [+] picture button
Tex14_predicted ENSRNOT00000055770 NOT ANNOTATED
17.0169 -17.39 0.00170415 700 17 1 17 [+] picture button
Sec3l1 ENSRNOT00000059819 SEC3-like 1 [Source:RefSeq_peptide;Acc:NP_001019941]
16.5939 -11.96 0.00170841 700 16 1 27 [+] picture button
Prss36 ENSRNOT00000026587 protease, serine, 36 [Source:MarkerSymbol;Acc:MGI:1924863]
16.8013 -20.48 0.00173165 700 10 4 14 [+] picture button
Aqp4 ENSRNOT00000021961 Aquaporin-4 (AQP-4) (WCH4) (Mercurial-insensitive water channel) (MIWC). [Source:Uniprot/SWISSPROT;Acc:P47863]
15.957 -12.88 0.00175654 623 17 2 19 [+] picture button
Gpr149 ENSRNOT00000019929 Probable G-protein coupled receptor 149 (Induced early in differentiating astrocytes gene protein). [Source:Uniprot/SWISSPROT;Acc:Q924Y8]
17.1496 -28.89 0.00180798 1093 10 2 14 [+] picture button
Sars1 ENSRNOT00000027449 Seryl-tRNA synthetase, cytoplasmic (EC 6.1.1.11) (Seryl-tRNA(Ser/Sec) synthetase) (Serine--tRNA ligase) (SerRS). [Source:Uniprot/SWISSPROT;Acc:Q6P799]
16.9418 -18.08 0.0018551 262 17 5 56 [+] picture button
Ddx5 ENSRNOT00000048490 ddx5 [Source:RefSeq_peptide;Acc:NP_001007614]
16.0322 -10.25 0.00189041 308 13 12 58 [+] picture button
Gabarapl2 ENSRNOT00000026274 Gamma-aminobutyric acid receptor-associated protein-like 2 (GABA(A) receptor-associated protein-like 2) (Ganglioside expression factor 2) (GEF-2). [Source:Uniprot/SWISSPROT;Acc:P60522]
16.2197 -14.13 0.00196725 502 14 1 19 [+] picture button
Anp32b ENSRNOT00000060043 Acidic leucine-rich nuclear phosphoprotein 32 family member B (Proliferation-related acidic leucine-rich protein PAL31). [Source:Uniprot/SWISSPROT;Acc:Q9EST6]
16.6722 -18.7 0.00197606 700 13 7 19 [+] picture button
PENK_RAT ENSRNOT00000011892 Proenkephalin A precursor [Contains: Synenkephalin; Met-enkephalin (Opioid growth factor) (OGF); Met-enkephalin-Arg-Gly-Leu; Leu- enkephalin; Met-enkephalin-Arg-Phe]. [Source:Uniprot/SWISSPROT;Acc:P04094]
16.8544 -18.5 0.00200896 314 18 8 53 [+] picture button
Col2a1 ENSRNOT00000037840 Collagen alpha-1(II) chain precursor (Alpha-1 type II collagen) [Contains: Chondrocalcin]. [Source:Uniprot/SWISSPROT;Acc:P05539]
17.0555 -22.79 0.00205313 137 6 7 19 [+] picture button
Gys2 ENSRNOT00000017332 glycogen synthase 2 [Source:MarkerSymbol;Acc:MGI:2385254]
17.1124 -19.54 0.00207751 700 19 2 27 [+] picture button
LOC680913 ENSRNOT00000060742 RIKEN cDNA 4933402J07 gene [Source:MarkerSymbol;Acc:MGI:3607717]RIKEN cDNA 4933402J07 gene [Source:MarkerSymbol;Acc:MGI:3607717] BY ORTHOLOGY TO:ENSMUST00000098527
16.5939 -20.26 0.00208106 700 14 2 17 [+] picture button
ENSRNOT00000029345 Hypothetical protein. [Source:Uniprot/SPTREMBL;Acc:Q05B46]Hypothetical protein. [Source:Uniprot/SPTREMBL;Acc:Q05B46] BY ORTHOLOGY TO:ENSBTAT00000049339
16.0753 -19.04 0.00208106 700 18 5 29 [+] picture button
RGD1566260_predicted ENSRNOT00000006180 SLIT-ROBO Rho GTPase-activating protein 1 (srGAP1) (Rho GTPase- activating protein 13). [Source:Uniprot/SWISSPROT;Acc:Q7Z6B7]SLIT-ROBO Rho GTPase-activating protein 1 (srGAP1) (Rho GTPase- activating protein 13). [Source:Uniprot/SWISSPROT;Acc:Q7Z6B7] BY ORTHOLOGY TO:ENST00000355086
16.0753 -8.73 0.00208106 700 18 6 25 [+] picture button
MGC109340 ENSRNOT00000046499 Signal peptidase complex subunit 3 (EC 3.4.-.-) (Microsomal signal peptidase 23 kDa subunit) (SPase 22 kDa subunit) (SPC22/23). [Source:Uniprot/SWISSPROT;Acc:Q568Z4]
16.0753 -19.13 0.00208106 700 11 1 12 [+] picture button
LOC680913 ENSRNOT00000032408 NOT ANNOTATED
16.5939 -20.26 0.00208106 700 10 1 10 [+] picture button
LOC498251 ENSRNOT00000036906 Putative C->U-editing enzyme APOBEC-4 (EC 3.5.4.-) (Apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like 4). [Source:Uniprot/SWISSPROT;Acc:Q6AXX9]
16.2758 -23.63 0.00211861 700 13 3 18 [+] picture button
ENSRNOT00000045509 NOT ANNOTATED
16.1462 -19.72 0.00222056 700 10 1 12 [+] picture button
LOC679307 ENSRNOT00000038733 predicted gene, EG432534 [Source:MarkerSymbol;Acc:MGI:3645014]predicted gene, EG432534 [Source:MarkerSymbol;Acc:MGI:3645014] BY ORTHOLOGY TO:ENSMUST00000053570
16.6137 -14.96 0.00229565 700 11 2 11 [+] picture button
Tnfrsf21_predicted ENSRNOT00000015918 Tumor necrosis factor receptor superfamily member 21 precursor (TNFR- related death receptor 6) (Death receptor 6). [Source:Uniprot/SWISSPROT;Acc:O75509]Tumor necrosis factor receptor superfamily member 21 precursor (TNFR- related death receptor 6) (Death receptor 6). [Source:Uniprot/SWISSPROT;Acc:O75509] BY ORTHOLOGY TO:ENSOANT00000013161
16.5402 -11.54 0.00233377 700 12 5 20 [+] picture button
RGD1306862_predicted ENSRNOT00000008107 CDNA: FLJ23205 fis, clone ADSE00359. [Source:Uniprot/SPTREMBL;Acc:Q9H5P5]CDNA: FLJ23205 fis, clone ADSE00359. [Source:Uniprot/SPTREMBL;Acc:Q9H5P5] BY ORTHOLOGY TO:ENSOANT00000013537
16.2596 -11.28 0.00234533 221 14 6 36 [+] picture button
LOC305166 ENSRNOT00000002936 1-acyl-sn-glycerol-3-phosphate acyltransferase theta (EC 2.3.1.51) (Lysophosphatidic acid acyltransferase theta) (LPAAT-theta). [Source:Uniprot/SWISSPROT;Acc:Q4V8J4]
15.8047 -22.69 0.00234533 312 13 4 39 [+] picture button

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Download table: GFF TXT
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