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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-100

915 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Hs3st2 ENSRNOT00000023773 Heparan sulfate glucosamine 3-O-sulfotransferase 2 (EC 2.8.2.29) (Heparan sulfate D-glucosaminyl 3-O-sulfotransferase 2) (Heparan sulfate 3-O-sulfotransferase 2). [Source:Uniprot/SWISSPROT;Acc:Q80W66]
16.6088 -18 3.75389e-07 737 14 6 22 [+] picture button
Frap1 ENSRNOT00000014167 FKBP12-rapamycin complex-associated protein (FK506-binding protein 12- rapamycin complex-associated protein 1) (Rapamycin target protein) (RAPT1) (Mammalian target of rapamycin) (mTOR). [Source:Uniprot/SWISSPROT;Acc:P42346]
15.368 -14.51 6.53662e-07 841 15 8 23 [+] picture button
Map3k3_predicted ENSRNOT00000055126 NOT ANNOTATED
15.7391 -21.13 1e-06 700 13 1 14 [+] picture button
Pmm1 ENSRNOT00000007164 phosphomannomutase 1 [Source:RefSeq_peptide;Acc:NP_001008324]
15.0765 -23.9 2.04036e-06 376 19 5 45 [+] picture button
RGD1309529_predicted ENSRNOT00000000749 Zinc finger CDGSH domain-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q9NZ45]Zinc finger CDGSH domain-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q9NZ45] BY ORTHOLOGY TO:ENSPTRT00000004707
15.4368 -16.28 2.61261e-06 325 18 7 51 [+] picture button
Ssr3 ENSRNOT00000014912 signal sequence receptor, gamma [Source:MarkerSymbol;Acc:MGI:1914687]
14.2867 -15.26 2.67429e-06 700 21 7 34 [+] picture button
Insig2 ENSRNOT00000003391 Insulin-induced gene 2 protein (INSIG-2). [Source:Uniprot/SWISSPROT;Acc:Q80UA9]
14.9421 -17.07 6.61614e-06 1609 7 3 7 [+] picture button
Qscn6 ENSRNOT00000005052 Sulfhydryl oxidase 1 precursor (EC 1.8.3.2) (Quiescin Q6) (rQSOX) (FAD-dependent sulfhydryl oxidase-2) (SOx-2) (rSOx). [Source:Uniprot/SWISSPROT;Acc:Q6IUU3]
14.8308 -22.6 1.01183e-05 700 19 2 29 [+] picture button
RGD1563235_predicted ENSRNOT00000023911 LOC402912 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6P3G4]LOC402912 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6P3G4] BY ORTHOLOGY TO:ENSDART00000058628
15.1523 -12.87 1.05411e-05 468 17 5 30 [+] picture button
Plk1 ENSRNOT00000025629 polo-like kinase 1 (Drosophila) [Source:MarkerSymbol;Acc:MGI:97621]
14.4159 -18.22 1.13991e-05 700 19 9 31 [+] picture button
1110032F04Rik ENSRNOT00000012982 RIKEN cDNA 1110032F04 gene [Source:MarkerSymbol;Acc:MGI:1915975]
17.2829 -27.1 1.34728e-05 123 6 5 32 [+] picture button
Plxdc2_predicted ENSRNOT00000000155 Plexin domain-containing protein 2 precursor (Tumor endothelial marker 7-related protein). [Source:Uniprot/SWISSPROT;Acc:Q6UX71]Plexin domain-containing protein 2 precursor (Tumor endothelial marker 7-related protein). [Source:Uniprot/SWISSPROT;Acc:Q6UX71] BY ORTHOLOGY TO:ENSGACT00000005282
15.5246 -13.18 1.36948e-05 375 12 9 41 [+] picture button
Dcps ENSRNOT00000013763 Scavenger mRNA-decapping enzyme DcpS (EC 3.-.-.-) (DCS-1) (Hint- related 7meGMP-directed hydrolase) (Histidine triad protein member 5) (HINT-5). [Source:Uniprot/SWISSPROT;Acc:Q8K4F7]
14.6677 -9.95 1.48272e-05 193 11 4 49 [+] picture button
Smarca5_predicted ENSRNOT00000024568 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 (EC 3.6.1.-) (SWI/SNF-related matrix- associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H). [Source:Uniprot/SWISSPROT;Acc:O60264]SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 (EC 3.6.1.-) (SWI/SNF-related matrix- associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H). [Source:Uniprot/SWISSPROT;Acc:O60264] BY ORTHOLOGY TO:ENSMMUT00000001198
15.4758 -19.71 1.52624e-05 1128 5 8 6 [+] picture button
Hnrpu ENSRNOT00000044477 heterogeneous nuclear ribonucleoprotein U [Source:RefSeq_peptide;Acc:NP_476480]
15.3904 -20.57 1.5674e-05 780 17 9 26 [+] picture button
Iqcg ENSRNOT00000032518 IQ domain-containing protein G. [Source:Uniprot/SWISSPROT;Acc:Q5PQQ6]
14.8308 -19.78 1.73042e-05 700 14 2 20 [+] picture button
RGD1306658 ENSRNOT00000021403 oligonucleotide/oligosaccharide-binding fold containing 2A [Source:RefSeq_peptide;Acc:NP_001014238]
15.6657 -16.14 2.45102e-05 1510 10 5 10 [+] picture button
Impdh1_predicted ENSRNOT00000027173 Inosine-5'-monophosphate dehydrogenase 1 (EC 1.1.1.205) (IMP dehydrogenase 1) (IMPDH-I) (IMPD 1). [Source:Uniprot/SWISSPROT;Acc:P20839]Inosine-5'-monophosphate dehydrogenase 1 (EC 1.1.1.205) (IMP dehydrogenase 1) (IMPDH-I) (IMPD 1). [Source:Uniprot/SWISSPROT;Acc:P20839] BY ORTHOLOGY TO:ENST00000389229
17.8025 -22.56 2.602e-05 755 18 4 29 [+] picture button
ENSRNOT00000058279 NOT ANNOTATED
15.2916 -11.69 2.67805e-05 700 22 1 16 [+] picture button
Ust_predicted ENSRNOT00000022003 Uronyl 2-sulfotransferase (EC 2.8.2.-). [Source:Uniprot/SWISSPROT;Acc:Q9Y2C2]Uronyl 2-sulfotransferase (EC 2.8.2.-). [Source:Uniprot/SWISSPROT;Acc:Q9Y2C2] BY ORTHOLOGY TO:ENST00000367463
14.0992 -13.99 3.07485e-05 121 4 6 15 [+] picture button
Prss15 ENSRNOT00000059542 protease, serine, 15 (Prss15), mRNA [Source:RefSeq_dna;Acc:NM_133404]
14.4024 -15.41 3.24514e-05 700 18 1 36 [+] picture button
Mvd ENSRNOT00000018145 Diphosphomevalonate decarboxylase (EC 4.1.1.33) (Mevalonate pyrophosphate decarboxylase) (Mevalonate (diphospho)decarboxylase). [Source:Uniprot/SWISSPROT;Acc:Q62967]
14.6445 -23.76 3.67203e-05 441 18 4 41 [+] picture button
Dync1li1 ENSRNOT00000014532 Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A). [Source:Uniprot/SWISSPROT;Acc:Q9QXU8]
14.6677 -20.43 5.91921e-05 135 7 4 18 [+] picture button
Mark1 ENSRNOT00000003198 Serine/threonine-protein kinase MARK1 (EC 2.7.11.1) (MAP/microtubule affinity-regulating kinase 1). [Source:Uniprot/SWISSPROT;Acc:O08678]
14.5435 -14.45 6.03069e-05 700 14 8 15 [+] picture button
Cideb_predicted ENSRNOT00000027612 hypothetical protein LOC553467 (LOC553467), misc RNA [Source:RefSeq_dna;Acc:XR_030045]hypothetical protein LOC553467 (LOC553467), misc RNA [Source:RefSeq_dna;Acc:XR_030045] BY ORTHOLOGY TO:ENSDART00000013538
14.2014 -29.77 6.44942e-05 479 18 5 40 [+] picture button
Tmem5 ENSRNOT00000006051 transmembrane protein 5 [Source:RefSeq_peptide;Acc:NP_001019930]
14.2085 -14.37 7.25616e-05 700 16 1 23 [+] picture button
RGD1565360_predicted ENSRNOT00000002291 holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) [Source:MarkerSymbol;Acc:MGI:894646]holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) [Source:MarkerSymbol;Acc:MGI:894646] BY ORTHOLOGY TO:ENSMUST00000088945
14.727 -15.73 7.45853e-05 700 23 2 36 [+] picture button
1810007M14Rik ENSRNOT00000002800 RIKEN cDNA 1810007M14 gene [Source:MarkerSymbol;Acc:MGI:1914617]
14.5768 -15.04 7.46934e-05 700 21 6 31 [+] picture button
RGD1308014_predicted ENSRNOT00000005715 Integrator complex subunit 7 (Int7). [Source:Uniprot/SWISSPROT;Acc:Q9NVH2]Integrator complex subunit 7 (Int7). [Source:Uniprot/SWISSPROT;Acc:Q9NVH2] BY ORTHOLOGY TO:ENSXETT00000031516
14.1254 -24.01 7.48474e-05 700 20 4 42 [+] picture button
Qtrt1 ENSRNOT00000010030 queuine tRNA-ribosyltransferase 1 [Source:RefSeq_peptide;Acc:NP_071586]
15.0289 -23.18 7.62652e-05 362 18 2 49 [+] picture button
Klhl17 ENSRNOT00000027547 Kelch-like protein 17 (Actinfilin). [Source:Uniprot/SWISSPROT;Acc:Q8K430]
14.554 -13.12 8.52002e-05 68 4 2 13 [+] picture button
Orc4l ENSRNOT00000006937 origin recognition complex, subunit 4-like [Source:RefSeq_peptide;Acc:NP_954523]
17.0555 -13.49 8.87542e-05 226 13 3 31 [+] picture button
NP_001073366.1 ENSRNOT00000003492 similar to 2700008B19Rik protein (predicted) (RGD1566204_predicted), mRNA [Source:RefSeq_dna;Acc:NM_001079897]
15.274 -24.79 9.05823e-05 700 19 5 32 [+] picture button
RGD1560519_predicted ENSRNOT00000038241 thyroid adenoma associated [Source:RefSeq_peptide;Acc:NP_001077422]thyroid adenoma associated [Source:RefSeq_peptide;Acc:NP_001077422] BY ORTHOLOGY TO:SINFRUT00000150260
14.9242 -21.14 9.33438e-05 700 15 2 21 [+] picture button
Cacna1b ENSRNOT00000006162 Voltage-dependent N-type calcium channel subunit alpha-1B (Voltage- gated calcium channel subunit alpha Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII). [Source:Uniprot/SWISSPROT;Acc:Q02294]
16.5939 -23.03 0.000102413 700 21 4 25 [+] picture button
Supt16h_predicted ENSRNOT00000016288 FACT complex subunit SPT16 (Facilitates chromatin transcription complex subunit SPT16) (hSPT16) (FACT 140 kDa subunit) (FACTp140) (Chromatin-specific transcription elongation factor 140 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:Q9Y5B9]FACT complex subunit SPT16 (Facilitates chromatin transcription complex subunit SPT16) (hSPT16) (FACT 140 kDa subunit) (FACTp140) (Chromatin-specific transcription elongation factor 140 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:Q9Y5B9] BY ORTHOLOGY TO:ENST00000216297
15.8318 -19.58 0.000105185 1247 14 5 17 [+] picture button
RGD1310470 ENSRNOT00000003001 RGD1310470 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5BJL1]
15.238 -21.99 0.000110975 591 14 4 28 [+] picture button
Dus2l_predicted ENSRNOT00000026827 dihydrouridine synthase 2-like (SMM1, S. cerevisiae) [Source:MarkerSymbol;Acc:MGI:1913619]dihydrouridine synthase 2-like (SMM1, S. cerevisiae) [Source:MarkerSymbol;Acc:MGI:1913619] BY ORTHOLOGY TO:ENSMUST00000034375
15.7063 -17.24 0.000111088 317 17 7 65 [+] picture button
Lrrc3 ENSRNOT00000001632 Leucine-rich repeat-containing protein 3 precursor. [Source:Uniprot/SWISSPROT;Acc:P59035]
14.8308 -16.24 0.000120742 700 22 2 36 [+] picture button
Tm2d1_predicted ENSRNOT00000009897 CG10795-PA [Source:RefSeq_peptide;Acc:NP_611583]CG10795-PA [Source:RefSeq_peptide;Acc:NP_611583] BY ORTHOLOGY TO:CG10795-RA
16.4283 -14.39 0.000121345 329 17 5 47 [+] picture button
Cplx4_predicted ENSRNOT00000022718 complexin 4 [Source:MarkerSymbol;Acc:MGI:2685803]complexin 4 [Source:MarkerSymbol;Acc:MGI:2685803] BY ORTHOLOGY TO:ENSMUST00000025397
14.5545 -22.22 0.000131396 700 16 2 28 [+] picture button
LOC691937 ENSRNOT00000020130 Stereocilin (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q4G3Z3]Stereocilin (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q4G3Z3] BY ORTHOLOGY TO:ENSMMUT00000030730
14.9242 -18.21 0.00013691 700 19 3 37 [+] picture button
RGD1306433_predicted ENSRNOT00000043408 CG11342-PA [Source:RefSeq_peptide;Acc:NP_647896]CG11342-PA [Source:RefSeq_peptide;Acc:NP_647896] BY ORTHOLOGY TO:CG11342-RA
15.0678 -20.17 0.00014763 359 20 4 47 [+] picture button
RGD1311126_predicted ENSRNOT00000013459 Uncharacterized protein C1orf34 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6PIU8]Uncharacterized protein C1orf34 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6PIU8] BY ORTHOLOGY TO:ENSGALT00000017155
16.0034 -13.83 0.0001549 530 18 6 39 [+] picture button
Dcun1d4_predicted ENSRNOT00000002945 conserved hypothetical proteinconserved hypothetical protein BY ORTHOLOGY TO:AAEL006847-RA
14.9124 -18.03 0.000167643 700 19 7 34 [+] picture button
Pign_predicted ENSRNOT00000020752 Phosphatidylinositol glycan class N (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q06A39]
14.1048 -16.61 0.000173171 700 18 3 32 [+] picture button
Rpo1-2 ENSRNOT00000024882 DNA-directed RNA polymerase I subunit RPA2 (EC 2.7.7.6) (RNA polymerase I subunit 2) (RPA135) (A127). [Source:Uniprot/SWISSPROT;Acc:O54888]
17.2829 -23.17 0.000204658 304 15 2 51 [+] picture button
RGD1565545_predicted ENSRNOT00000021917 Zinc finger protein 784. [Source:Uniprot/SWISSPROT;Acc:Q8NCA9]Zinc finger protein 784. [Source:Uniprot/SWISSPROT;Acc:Q8NCA9] BY ORTHOLOGY TO:ENSPTRT00000042071
15.0882 -24.6 0.000208234 700 20 5 29 [+] picture button
Rae1 ENSRNOT00000038182 mRNA export factor (mRNA-associated protein mrnp 41) (Rae1 protein homolog). [Source:Uniprot/SWISSPROT;Acc:Q3SWS8]
15.5175 -17.18 0.000228006 331 19 6 67 [+] picture button
Iag2 ENSRNOT00000003436 Implantation-associated protein precursor (IAP). [Source:Uniprot/SWISSPROT;Acc:O35777]
15.1377 -24.26 0.000228879 700 17 2 32 [+] picture button

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Download table: GFF TXT
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