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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-miR-1

771 hits found.


Page 1 of 16
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Ihpk2 ENSRNOT00000043454 Inositol hexakisphosphate kinase 2 (EC 2.7.4.21) (InsP6 kinase 2) (P(i)-uptake stimulator) (PiUS). [Source:Uniprot/SWISSPROT;Acc:Q9R0U1]
19.1021 -19.2 1.62292e-10 280 16 10 55 [+] picture button
RGD1310121_predicted ENSRNOT00000039166 Tubulin polymerization-promoting protein (TPPP) (25 kDa brain-specific protein) (p25-alpha) (p24) (p25). [Source:Uniprot/SWISSPROT;Acc:O94811]Tubulin polymerization-promoting protein (TPPP) (25 kDa brain-specific protein) (p25-alpha) (p24) (p25). [Source:Uniprot/SWISSPROT;Acc:O94811] BY ORTHOLOGY TO:ENSOANT00000017838
20.5803 -21.99 2.71308e-09 87 5 11 24 [+] picture button
Ppib ENSRNOT00000022828 Peptidyl-prolyl cis-trans isomerase B precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin B) (S-cyclophilin) (SCYLP) (CYP-S1). [Source:Uniprot/SWISSPROT;Acc:P24368]
18.0788 -19.14 7.09888e-09 213 12 8 36 [+] picture button
Clcn3 ENSRNOT00000014845 Chloride channel protein 3 (ClC-3). [Source:Uniprot/SWISSPROT;Acc:P51792]
18.0609 -19.74 1.8002e-08 700 21 8 30 [+] picture button
Sfrs9 ENSRNOT00000001539 Splicing factor, arginine/serine-rich 9. [Source:Uniprot/SWISSPROT;Acc:Q5PPI1]
17.9196 -15.82 7.31575e-08 369 20 8 69 [+] picture button
Papss2_predicted ENSRNOT00000014979 3'-phosphoadenosine 5'-phosphosulfate synthase 2. [Source:Uniprot/SPTREMBL;Acc:Q90XY2]3'-phosphoadenosine 5'-phosphosulfate synthase 2. [Source:Uniprot/SPTREMBL;Acc:Q90XY2] BY ORTHOLOGY TO:SINFRUT00000154154
18.4028 -18.45 2.29445e-07 700 13 3 32 [+] picture button
Trappc3 ENSRNOT00000014383 Trafficking protein particle complex subunit 3. [Source:Uniprot/SWISSPROT;Acc:Q5U1Z2]
17.3512 -14.47 3.76138e-07 613 20 7 39 [+] picture button
Ddx5 ENSRNOT00000048490 ddx5 [Source:RefSeq_peptide;Acc:NP_001007614]
20.4666 -20.92 9.71838e-07 308 13 12 58 [+] picture button
ENSRNOT00000049143 NOT ANNOTATED
17.8212 -20.8 1e-06 700 13 1 18 [+] picture button
Phax ENSRNOT00000019627 RNA U small nuclear RNA export adapter protein (Phosphorylated adapter RNA export protein) (Resiniferatoxin-binding protein 2) (RBP-2) (26 kDa resiniferatoxin-binding protein) (RBP-26) (RTX-42). [Source:Uniprot/SWISSPROT;Acc:Q63068]
15.9351 -17.45 1.80139e-06 337 21 4 50 [+] picture button
Eml3 ENSRNOT00000026938 echinoderm microtubule associated protein like 3 [Source:MarkerSymbol;Acc:MGI:2387612]
16.7144 -13.24 3.72364e-06 240 14 7 50 [+] picture button
Adss_predicted ENSRNOT00000005961 Adenylosuccinate synthetase isozyme 2 (EC 6.3.4.4) (Adenylosuccinate synthetase, acidic isozyme) (IMP--aspartate ligase 2) (AdSS 2) (AMPSase 2). [Source:Uniprot/SWISSPROT;Acc:P30520]Adenylosuccinate synthetase isozyme 2 (EC 6.3.4.4) (Adenylosuccinate synthetase, acidic isozyme) (IMP--aspartate ligase 2) (AdSS 2) (AMPSase 2). [Source:Uniprot/SWISSPROT;Acc:P30520] BY ORTHOLOGY TO:ENSOANT00000016275
16.7623 -16.73 4.13506e-06 1052 18 7 23 [+] picture button
Centg2 ENSRNOT00000026360 centaurin, gamma 2 [Source:MarkerSymbol;Acc:MGI:2653690]
15.9563 -16 4.2845e-06 1087 14 5 14 [+] picture button
Rsbn1l_predicted ENSRNOT00000046142 round spermatid basic protein 1-like [Source:RefSeq_peptide;Acc:NP_940869]round spermatid basic protein 1-like [Source:RefSeq_peptide;Acc:NP_940869] BY ORTHOLOGY TO:SINFRUT00000162420
17.7619 -13.89 4.84532e-06 492 16 7 45 [+] picture button
Tkt ENSRNOT00000021862 Transketolase (EC 2.2.1.1) (TK). [Source:Uniprot/SWISSPROT;Acc:P50137]
16.9418 -13.3 5.60556e-06 107 6 5 21 [+] picture button
Rasa1 ENSRNOT00000046251 Ras GTPase-activating protein 1 (GTPase-activating protein) (GAP) (Ras p21 protein activator) (p120GAP) (RasGAP). [Source:Uniprot/SWISSPROT;Acc:P50904]
18.2639 -21.01 7.07328e-06 700 20 10 34 [+] picture button
Bckdhb ENSRNOT00000013249 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial precursor (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component beta chain) (BCKDH E1-beta) (Fragment). [Source:Uniprot/SWISSPROT;Acc:P35738]
16.487 -12.39 7.67986e-06 279 12 3 51 [+] picture button
MGC94782 ENSRNOT00000010927 Transmembrane protein 178 precursor. [Source:Uniprot/SWISSPROT;Acc:Q68FV0]
16.9136 -15.56 8.39299e-06 739 20 9 30 [+] picture button
Cltc ENSRNOT00000055800 Clathrin heavy chain. [Source:Uniprot/SWISSPROT;Acc:P11442]
16.1207 -14.38 8.86571e-06 943 12 10 16 [+] picture button
Asz1 ENSRNOT00000010916 ankyrin repeat, SAM and basic leucine zipper domain containing 1 [Source:RefSeq_peptide;Acc:NP_570106]
17.7377 -12.62 9.45272e-06 278 14 5 42 [+] picture button
Syap1 ENSRNOT00000006584 synapse associated protein 1 [Source:RefSeq_peptide;Acc:NP_001004253]
17.4235 -16.13 1.13131e-05 700 14 5 28 [+] picture button
Shprh_predicted ENSRNOT00000019893 SNF2 histone linker PHD RING helicase isoform a [Source:RefSeq_peptide;Acc:NP_001036148]SNF2 histone linker PHD RING helicase isoform a [Source:RefSeq_peptide;Acc:NP_001036148] BY ORTHOLOGY TO:ENSGACT00000015359
16.8013 -13.78 1.23154e-05 700 15 3 22 [+] picture button
Slc33a1 ENSRNOT00000013392 Acetyl-coenzyme A transporter 1 (AT-1) (Acetyl-CoA transporter) (Solute carrier family 33 member 1). [Source:Uniprot/SWISSPROT;Acc:Q6AYY8]
16.179 -17.18 1.25029e-05 700 12 4 19 [+] picture button
RGD1305475_predicted ENSRNOT00000010675 Ngg1 interacting factor 3 like 1 binding protein 1 [Source:RefSeq_peptide;Acc:NP_079351]Ngg1 interacting factor 3 like 1 binding protein 1 [Source:RefSeq_peptide;Acc:NP_079351] BY ORTHOLOGY TO:ENST00000295899
15.9185 -11.42 1.59332e-05 231 9 4 32 [+] picture button
Eed_predicted ENSRNOT00000024082 embryonic ectoderm development isoform b [Source:RefSeq_peptide;Acc:NP_694536]embryonic ectoderm development isoform b [Source:RefSeq_peptide;Acc:NP_694536] BY ORTHOLOGY TO:ENSMODT00000005356
18.0788 -16.14 1.6718e-05 286 15 9 72 [+] picture button
Sptlc1_predicted ENSRNOT00000014546 Serine palmitoyltransferase 1 (EC 2.3.1.50) (Long chain base biosynthesis protein 1) (LCB 1) (Serine-palmitoyl-CoA transferase 1) (SPT 1) (SPT1). [Source:Uniprot/SWISSPROT;Acc:O15269]Serine palmitoyltransferase 1 (EC 2.3.1.50) (Long chain base biosynthesis protein 1) (LCB 1) (Serine-palmitoyl-CoA transferase 1) (SPT 1) (SPT1). [Source:Uniprot/SWISSPROT;Acc:O15269] BY ORTHOLOGY TO:ENSGACT00000024729
16.2648 -18.09 1.95349e-05 1088 9 4 13 [+] picture button
Hnrpu ENSRNOT00000044477 heterogeneous nuclear ribonucleoprotein U [Source:RefSeq_peptide;Acc:NP_476480]
17.0431 -16.84 2.0977e-05 780 17 9 26 [+] picture button
Cpeb1_predicted ENSRNOT00000026009 Cytoplasmic polyadenylation element-binding protein 1 (CPE-binding protein 1) (CPE-BP1) (CPEB-1) (CPEB). [Source:Uniprot/SWISSPROT;Acc:P0C279]
17.5909 -21.72 2.14711e-05 700 18 7 30 [+] picture button
Pla2g4a ENSRNOT00000003630 Cytosolic phospholipase A2 (cPLA2) (Phospholipase A2 group IVA) [Includes: Phospholipase A2 (EC 3.1.1.4) (Phosphatidylcholine 2- acylhydrolase); Lysophospholipase (EC 3.1.1.5)]. [Source:Uniprot/SWISSPROT;Acc:P50393]
17.9968 -15.63 2.27714e-05 398 18 5 46 [+] picture button
Pdik1l_predicted ENSRNOT00000022141 PDIK1L protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q2KIF7]PDIK1L protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q2KIF7] BY ORTHOLOGY TO:ENSBTAT00000001982
16.3307 -12.36 2.31441e-05 610 20 7 41 [+] picture button
Prkcsh_predicted ENSRNOT00000018009 Glucosidase 2 subunit beta precursor (Glucosidase II subunit beta) (Protein kinase C substrate, 60.1 kDa protein, heavy chain) (PKCSH) (80K-H protein). [Source:Uniprot/SWISSPROT;Acc:P14314]Glucosidase 2 subunit beta precursor (Glucosidase II subunit beta) (Protein kinase C substrate, 60.1 kDa protein, heavy chain) (PKCSH) (80K-H protein). [Source:Uniprot/SWISSPROT;Acc:P14314] BY ORTHOLOGY TO:ENSMMUT00000003300
16.3733 -10.98 2.43538e-05 700 5 3 29 [+] picture button
RGD1311164_predicted ENSRNOT00000026838 Uncharacterized protein C12orf4. [Source:Uniprot/SWISSPROT;Acc:Q9NQ89]Uncharacterized protein C12orf4. [Source:Uniprot/SWISSPROT;Acc:Q9NQ89] BY ORTHOLOGY TO:ENST00000261250
18.6566 -19 2.55072e-05 412 21 3 46 [+] picture button
Serinc3 ENSRNOT00000013445 serine incorporator 3 [Source:RefSeq_peptide;Acc:NP_001008313]
17.4654 -19.45 2.81525e-05 610 17 5 28 [+] picture button
Abcb7 ENSRNOT00000003739 ATP-binding cassette sub-family B member 7, mitochondrial precursor (ATP-binding cassette transporter 7) (ABC transporter 7 protein). [Source:Uniprot/SWISSPROT;Acc:Q704E8]
16.6976 -17 2.82827e-05 700 13 6 25 [+] picture button
Wdr19_predicted ENSRNOT00000003991 WD repeat protein 19. [Source:Uniprot/SWISSPROT;Acc:Q8NEZ3]WD repeat protein 19. [Source:Uniprot/SWISSPROT;Acc:Q8NEZ3] BY ORTHOLOGY TO:ENST00000288634
16.0322 -9.68 2.86211e-05 300 16 5 62 [+] picture button
Neto2_predicted ENSRNOT00000021739 Neuropilin and tolloid-like protein 2 precursor (Brain-specific transmembrane protein containing 2 CUB and 1 LDL-receptor class A domains protein 2). [Source:Uniprot/SWISSPROT;Acc:Q8NC67]Neuropilin and tolloid-like protein 2 precursor (Brain-specific transmembrane protein containing 2 CUB and 1 LDL-receptor class A domains protein 2). [Source:Uniprot/SWISSPROT;Acc:Q8NC67] BY ORTHOLOGY TO:ENSMMUT00000006662
17.3198 -20.7 3.0202e-05 700 15 3 23 [+] picture button
Smarcb1 ENSRNOT00000029458 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 [Source:RefSeq_peptide;Acc:NP_001020899]
16.487 -13.84 3.2214e-05 277 17 8 55 [+] picture button
Gucy1b3 ENSRNOT00000016365 Guanylate cyclase soluble subunit beta-1 (EC 4.6.1.2) (GCS-beta-1) (Soluble guanylate cyclase small subunit). [Source:Uniprot/SWISSPROT;Acc:P20595]
16.6976 -10.98 3.31225e-05 700 16 1 21 [+] picture button
Palb2 ENSRNOT00000047420 partner and localizer of BRCA2 [Source:MarkerSymbol;Acc:MGI:3040695]
17.0626 -12.94 3.3519e-05 700 21 7 30 [+] picture button
Q8K1P7_RAT ENSRNOT00000013165 Brahma-related protein 1 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8K1P7]
15.9185 -9.08 3.40449e-05 106 6 7 25 [+] picture button
Ap2a1_predicted ENSRNOT00000020304 The apt-4 gene encodes an adaptin: specifically, it encodes an ortholog of the alpha subunit of adaptor protein complex 2 (AP-2). [Source: WormBase]The apt-4 gene encodes an adaptin: specifically, it encodes an ortholog of the alpha subunit of adaptor protein complex 2 (AP-2). [Source: WormBase] BY ORTHOLOGY TO:T20B5.1.1
17.5103 -11.69 3.65965e-05 236 15 7 69 [+] picture button
Anxa2 ENSRNOT00000038677 Annexin A2 (Annexin-2) (Annexin II) (Lipocortin II) (Calpactin I heavy chain) (Chromobindin-8) (p36) (Protein I) (Placental anticoagulant protein IV) (PAP-IV). [Source:Uniprot/SWISSPROT;Acc:Q07936]
16.487 -11.78 3.73889e-05 272 15 6 31 [+] picture button
RGD1563597_predicted ENSRNOT00000002397 RIKEN cDNA 0610012D17 gene [Source:MarkerSymbol;Acc:MGI:1913311]RIKEN cDNA 0610012D17 gene [Source:MarkerSymbol;Acc:MGI:1913311] BY ORTHOLOGY TO:ENSMUST00000014220
16.2596 -9.97 3.84115e-05 303 10 5 35 [+] picture button
RGD1307392_predicted ENSRNOT00000013556 Uncharacterized protein C14orf179. [Source:Uniprot/SWISSPROT;Acc:Q96FT9]Uncharacterized protein C14orf179. [Source:Uniprot/SWISSPROT;Acc:Q96FT9] BY ORTHOLOGY TO:ENSORLT00000020746
16.8281 -19.16 4.34349e-05 163 8 5 32 [+] picture button
Unc50 ENSRNOT00000024582 unc-50 homolog [Source:RefSeq_peptide;Acc:NP_620274]
15.9185 -11.67 4.852e-05 169 9 5 26 [+] picture button
Snx2_predicted ENSRNOT00000050631 Sorting nexin-2 (Transformation-related gene 9 protein) (TRG-9). [Source:Uniprot/SWISSPROT;Acc:O60749]Sorting nexin-2 (Transformation-related gene 9 protein) (TRG-9). [Source:Uniprot/SWISSPROT;Acc:O60749] BY ORTHOLOGY TO:ENSMODT00000039717
17.5598 -16.57 5.50543e-05 436 19 10 52 [+] picture button
RGD1563202_predicted ENSRNOT00000026335 hypothetical protein LOC511672 [Source:RefSeq_peptide;Acc:NP_001033173]hypothetical protein LOC511672 [Source:RefSeq_peptide;Acc:NP_001033173] BY ORTHOLOGY TO:ENSBTAT00000024370
16.0152 -18.68 5.59959e-05 508 16 5 22 [+] picture button
RGD1564821_predicted ENSRNOT00000006946 N-acetylglucosamine-1-phosphotransferase subunits alpha/beta precursor (EC 2.7.8.17) (GlcNAc-1-phosphotransferase alpha/beta subunits) (UDP- N-acetylglucosamine-1-phosphotransferase alpha/beta subunits) (Stealth protein GNPTAB) [Contains: N-acetylglucosam [Source:Uniprot/SWISSPROT;Acc:Q3T906]N-acetylglucosamine-1-phosphotransferase subunits alpha/beta precursor (EC 2.7.8.17) (GlcNAc-1-phosphotransferase alpha/beta subunits) (UDP- N-acetylglucosamine-1-phosphotransferase alpha/beta subunits) (Stealth protein GNPTAB) [Contains: N-acetylglucosam [Source:Uniprot/SWISSPROT;Acc:Q3T906] BY ORTHOLOGY TO:ENSMMUT00000017610
17.9493 -20.03 5.77638e-05 558 14 8 24 [+] picture button
1500015O10Rik ENSRNOT00000036990 RIKEN cDNA 1500015O10 gene [Source:MarkerSymbol;Acc:MGI:1926146]
16.0322 -12 6.16151e-05 172 9 6 33 [+] picture button
RGD1560408_predicted ENSRNOT00000024701 mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isoenzyme A [Source:RefSeq_peptide;Acc:NP_036346]mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isoenzyme A [Source:RefSeq_peptide;Acc:NP_036346] BY ORTHOLOGY TO:ENSXETT00000042031
19.645 -21.56 6.37778e-05 372 15 8 39 [+] picture button

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Download table: GFF TXT
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