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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-let-7i*

981 hits found.


Page 1 of 20
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Ercc8_predicted ENSRNOT00000013598 DNA excision repair protein ERCC-8 (Cockayne syndrome WD repeat protein CSA). [Source:Uniprot/SWISSPROT;Acc:Q13216]DNA excision repair protein ERCC-8 (Cockayne syndrome WD repeat protein CSA). [Source:Uniprot/SWISSPROT;Acc:Q13216] BY ORTHOLOGY TO:ENST00000265038
14.5003 -14.83 5.0924e-07 872 16 2 21 [+] picture button
ENSRNOT00000033618 NOT ANNOTATED
15.3165 -22.64 1e-06 700 12 1 17 [+] picture button
RGD1564952_predicted ENSRNOT00000005355 similar to zinc finger, RAN-binding domain containing 3 (predicted) (RGD1564952_predicted), mRNA [Source:RefSeq_dna;Acc:XR_007587]
16.179 -18.23 1e-06 700 18 5 25 [+] picture button
Frrs1 ENSRNOT00000021988 ferric-chelate reductase 1 [Source:MarkerSymbol;Acc:MGI:108076]
14.5889 -17.58 1.92139e-06 700 16 2 29 [+] picture button
Renbp ENSRNOT00000056337 N-acylglucosamine 2-epimerase (EC 5.1.3.8) (GlcNAc 2-epimerase) (N- acetyl-D-glucosamine 2-epimerase) (AGE) (Renin-binding protein) (RnBP). [Source:Uniprot/SWISSPROT;Acc:P51607]
14.8308 -20.52 3.04125e-06 700 20 4 32 [+] picture button
Dnmt1 ENSRNOT00000061192 DNA (cytosine-5-)-methyltransferase 1 [Source:RefSeq_peptide;Acc:NP_445806]
16.3853 -14.3 4.06193e-06 700 19 7 36 [+] picture button
Mark1 ENSRNOT00000003198 Serine/threonine-protein kinase MARK1 (EC 2.7.11.1) (MAP/microtubule affinity-regulating kinase 1). [Source:Uniprot/SWISSPROT;Acc:O08678]
14.6474 -14.86 6.01013e-06 700 14 8 15 [+] picture button
Actb ENSRNOT00000042459 Actin, cytoplasmic 1 (Beta-actin). [Source:Uniprot/SWISSPROT;Acc:P60711]
17.8514 -18.02 6.16545e-06 69 3 3 9 [+] picture button
ENSRNOT00000060306 NOT ANNOTATED
16.1454 -20.27 1.44043e-05 700 11 1 15 [+] picture button
Mmp19_predicted ENSRNOT00000008909 Matrix metalloproteinase-19 precursor (EC 3.4.24.-) (MMP-19) (Matrix metalloproteinase RASI) (MMP-18). [Source:Uniprot/SWISSPROT;Acc:Q99542]Matrix metalloproteinase-19 precursor (EC 3.4.24.-) (MMP-19) (Matrix metalloproteinase RASI) (MMP-18). [Source:Uniprot/SWISSPROT;Acc:Q99542] BY ORTHOLOGY TO:ENSMMUT00000008819
14.6088 -18.94 1.61287e-05 700 14 3 19 [+] picture button
LOC681658 ENSRNOT00000001928 Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP) (CDP2) (Fragment). [Source:Uniprot/SWISSPROT;Acc:P53565]
15.2349 -19.56 3.1491e-05 686 17 8 30 [+] picture button
Srp19_predicted ENSRNOT00000027418 Signal recognition particle 19 kDa protein (SRP19). [Source:Uniprot/SWISSPROT;Acc:P09132]Signal recognition particle 19 kDa protein (SRP19). [Source:Uniprot/SWISSPROT;Acc:P09132] BY ORTHOLOGY TO:ENST00000379648
14.82 -15.68 3.23489e-05 359 16 6 40 [+] picture button
A4K5G8_RAT ENSRNOT00000005066 WDR16-like protein. [Source:Uniprot/SPTREMBL;Acc:A4K5G8]
15.3538 -17.74 3.88333e-05 700 20 5 31 [+] picture button
Olfml2b_predicted ENSRNOT00000004117 olfactomedin-like 2B [Source:RefSeq_peptide;Acc:NP_056256]olfactomedin-like 2B [Source:RefSeq_peptide;Acc:NP_056256] BY ORTHOLOGY TO:ENST00000294794
15.6404 -15 4.82433e-05 470 17 5 33 [+] picture button
LOC367134 ENSRNOT00000051207 similar to 60S ribosomal protein L7a (LOC367134), mRNA [Source:RefSeq_dna;Acc:XR_008300]
14.8693 -8.3 5.35076e-05 700 13 1 17 [+] picture button
RGD1564178_predicted ENSRNOT00000020643 Growth differentiation factor 3. [Source:Uniprot/SPTREMBL;Acc:A2SY89]
15.1714 -13.95 5.62999e-05 700 15 1 17 [+] picture button
RGD1306433_predicted ENSRNOT00000043408 CG11342-PA [Source:RefSeq_peptide;Acc:NP_647896]CG11342-PA [Source:RefSeq_peptide;Acc:NP_647896] BY ORTHOLOGY TO:CG11342-RA
14.9553 -19.05 5.75066e-05 359 20 4 47 [+] picture button
Crim1_predicted ENSRNOT00000005983 Cysteine-rich motor neuron 1 protein precursor (CRIM-1). [Source:Uniprot/SWISSPROT;Acc:Q7T3Q2]Cysteine-rich motor neuron 1 protein precursor (CRIM-1). [Source:Uniprot/SWISSPROT;Acc:Q7T3Q2] BY ORTHOLOGY TO:ENSDART00000050534
16.7332 -17.06 5.75189e-05 700 23 8 36 [+] picture button
Pigf ENSRNOT00000020600 phosphatidylinositol glycan anchor biosynthesis, class F [Source:MarkerSymbol;Acc:MGI:99462]
15.0382 -15.54 6.46506e-05 700 14 9 22 [+] picture button
Abca2 ENSRNOT00000020339 ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2). [Source:Uniprot/SWISSPROT;Acc:Q9ESR9]
15.247 -19.84 6.6075e-05 655 17 4 27 [+] picture button
Q63274_RAT ENSRNOT00000056464 Kallikrein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q63274]
14.727 -23.74 7.88095e-05 700 10 1 9 [+] picture button
RGD1562922_predicted ENSRNOT00000037446 ankyrin repeat and SOCS box-containing protein 10 [Source:RefSeq_peptide;Acc:NP_543147]ankyrin repeat and SOCS box-containing protein 10 [Source:RefSeq_peptide;Acc:NP_543147] BY ORTHOLOGY TO:ENST00000377867
15.1353 -20.83 7.91357e-05 700 20 3 26 [+] picture button
Frap1 ENSRNOT00000055636 FKBP12-rapamycin complex-associated protein (FK506-binding protein 12- rapamycin complex-associated protein 1) (Rapamycin target protein) (RAPT1) (Mammalian target of rapamycin) (mTOR). [Source:Uniprot/SWISSPROT;Acc:P42346]
16.4791 -23.56 8.60097e-05 700 13 1 15 [+] picture button
LOC691921 ENSRNOT00000031297 RIKEN cDNA 1810014B01 gene [Source:MarkerSymbol;Acc:MGI:1913513]RIKEN cDNA 1810014B01 gene [Source:MarkerSymbol;Acc:MGI:1913513] BY ORTHOLOGY TO:ENSMUST00000079648
14.6392 -18.94 8.79507e-05 700 14 2 15 [+] picture button
Cldn10_predicted ENSRNOT00000013669 NOT ANNOTATED
15.1714 -13.62 8.903e-05 700 9 1 13 [+] picture button
Yeats4_predicted ENSRNOT00000007580 YEATS domain-containing protein 4 (Glioma-amplified sequence-41) (Gas41) (NuMA-binding protein 1) (NuBI-1) (NuBI1). [Source:Uniprot/SWISSPROT;Acc:O95619]YEATS domain-containing protein 4 (Glioma-amplified sequence-41) (Gas41) (NuMA-binding protein 1) (NuBI-1) (NuBI1). [Source:Uniprot/SWISSPROT;Acc:O95619] BY ORTHOLOGY TO:ENSMODT00000025936
15.835 -16.06 0.000116676 484 18 3 38 [+] picture button
Susd3_predicted ENSRNOT00000032997 NOT ANNOTATED
15.1793 -25.19 0.000118088 640 16 1 20 [+] picture button
Cops4 ENSRNOT00000003046 COP9 signalosome complex subunit 4 (Signalosome subunit 4) (SGN4) (JAB1-containing signalosome subunit 4). [Source:Uniprot/SWISSPROT;Acc:Q68FS2]
14.5712 -15.22 0.000120027 318 16 6 71 [+] picture button
Susd3_predicted ENSRNOT00000022168 Sushi domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q96L08]Sushi domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q96L08] BY ORTHOLOGY TO:ENSGALT00000008406
15.1377 -25.19 0.000130543 700 20 4 35 [+] picture button
Hspb3 ENSRNOT00000014627 Heat-shock protein beta-3 (HspB3). [Source:Uniprot/SWISSPROT;Acc:Q9QZ58]
14.5196 -18.11 0.000137814 700 17 4 25 [+] picture button
Tagap_predicted ENSRNOT00000025580 T-cell activation Rho GTPase-activating protein (T-cell activation GTPase-activating protein). [Source:Uniprot/SWISSPROT;Acc:Q8N103]T-cell activation Rho GTPase-activating protein (T-cell activation GTPase-activating protein). [Source:Uniprot/SWISSPROT;Acc:Q8N103] BY ORTHOLOGY TO:ENSMODT00000009606
14.5196 -17.11 0.000137814 700 19 6 47 [+] picture button
Pgr ENSRNOT00000038313 Progesterone receptor (PR). [Source:Uniprot/SWISSPROT;Acc:Q63449]
16.3733 -13.52 0.000140594 283 17 5 62 [+] picture button
Dlx5 ENSRNOT00000014946 Homeobox protein DLX-5 (DLX-3) (RDLX). [Source:Uniprot/SWISSPROT;Acc:P50575]
15.9565 -10.66 0.000144209 342 17 11 53 [+] picture button
Uox ENSRNOT00000021970 Uricase (EC 1.7.3.3) (Urate oxidase). [Source:Uniprot/SWISSPROT;Acc:P09118]
14.6117 -27.97 0.000144536 408 19 2 45 [+] picture button
Cntn4 ENSRNOT00000007788 Contactin-4 precursor (Brain-derived immunoglobulin superfamily protein 2) (BIG-2). [Source:Uniprot/SWISSPROT;Acc:Q62845]
15.1793 -17.72 0.000145618 700 18 6 28 [+] picture button
Wdsub1 ENSRNOT00000033947 WD repeat, SAM and U-box domain-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q5FVN8]
14.4817 -21.5 0.000152511 700 11 1 11 [+] picture button
Hoxa5 ENSRNOT00000008523 Homeobox protein Hox-A5 (Hox-1.3) (Fragment). [Source:Uniprot/SWISSPROT;Acc:P52949]
14.554 -24.27 0.000183676 214 12 8 41 [+] picture button
RGD1566222_predicted ENSRNOT00000021613 Coiled-coil domain-containing protein 106. [Source:Uniprot/SWISSPROT;Acc:Q9BWC9]Coiled-coil domain-containing protein 106. [Source:Uniprot/SWISSPROT;Acc:Q9BWC9] BY ORTHOLOGY TO:ENSOANT00000032381
15.8679 -20.85 0.000186716 700 19 3 25 [+] picture button
LOC689240 ENSRNOT00000023678 Neurobeachin-like 1 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 17 protein). [Source:Uniprot/SWISSPROT;Acc:Q6ZS30]Neurobeachin-like 1 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 17 protein). [Source:Uniprot/SWISSPROT;Acc:Q6ZS30] BY ORTHOLOGY TO:ENSMODT00000037307
14.6065 -18.94 0.000243483 700 13 7 20 [+] picture button
Nkx2-5 ENSRNOT00000028155 Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (rNKx-2.5). [Source:Uniprot/SWISSPROT;Acc:O35767]
17.0555 -18.02 0.000247898 291 13 6 37 [+] picture button
Tex14_predicted ENSRNOT00000009077 Testis-expressed protein 14 (Testis-expressed sequence 14) (Protein kinase-like protein SgK307) (Sugen kinase 307). [Source:Uniprot/SWISSPROT;Acc:Q8IWB6]Testis-expressed protein 14 (Testis-expressed sequence 14) (Protein kinase-like protein SgK307) (Sugen kinase 307). [Source:Uniprot/SWISSPROT;Acc:Q8IWB6] BY ORTHOLOGY TO:ENSMODT00000018640
14.5196 -12.34 0.000325936 700 22 3 37 [+] picture button
Exosc9 ENSRNOT00000020662 Exosome complex exonuclease RRP45 (EC 3.1.13.-) (Exosome component 9). [Source:Uniprot/SWISSPROT;Acc:Q4QR75]
15.1225 -16.12 0.000336805 264 11 3 31 [+] picture button
4930571C24Rik ENSRNOT00000061987 RIKEN cDNA 4930571C24 gene [Source:MarkerSymbol;Acc:MGI:1925467]
15.6605 -17.61 0.000365948 700 20 2 23 [+] picture button
Agxt2 ENSRNOT00000059952 Alanine--glyoxylate aminotransferase 2, mitochondrial precursor (EC 2.6.1.44) ((R)-3-amino-2-methylpropionate--pyruvate transaminase) (EC 2.6.1.40) (AGT 2) (Beta-alanine-pyruvate aminotransferase) (Beta- ALAAT II) (D-AIBAT). [Source:Uniprot/SWISSPROT;Acc:Q64565]
15.1665 -19.39 0.000419255 604 17 3 24 [+] picture button
Q4G022_RAT ENSRNOT00000005122 Asna1 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q4G022]
16.1459 -25.48 0.00043985 310 15 8 65 [+] picture button
Ifng ENSRNOT00000009919 Interferon gamma precursor (IFN-gamma). [Source:Uniprot/SWISSPROT;Acc:P01581]
15.7642 -20.08 0.000443587 700 15 6 33 [+] picture button
Denr ENSRNOT00000001467 density-regulated protein [Source:MarkerSymbol;Acc:MGI:1915434]
16.923 -19.99 0.000460411 700 15 5 24 [+] picture button
LOC315508 ENSRNOT00000060655 similar to mKIAA0056 protein (LOC315508), mRNA [Source:RefSeq_dna;Acc:NM_001034000]
15.453 -17.22 0.000554163 700 17 4 23 [+] picture button
LOC305166 ENSRNOT00000002936 1-acyl-sn-glycerol-3-phosphate acyltransferase theta (EC 2.3.1.51) (Lysophosphatidic acid acyltransferase theta) (LPAAT-theta). [Source:Uniprot/SWISSPROT;Acc:Q4V8J4]
16.2596 -21.38 0.000572109 312 13 4 39 [+] picture button
RT1-Ha ENSRNOT00000036900 RT1 class II, locus Ha [Source:RefSeq_peptide;Acc:NP_001008848]
16.0219 -14.33 0.000625329 467 17 2 27 [+] picture button

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Download table: GFF TXT
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