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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-let-7b*

956 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Rabggtb ENSRNOT00000013660 Geranylgeranyl transferase type-2 subunit beta (EC 2.5.1.60) (Geranylgeranyl transferase type II subunit beta) (Rab geranylgeranyltransferase subunit beta) (Rab geranyl- geranyltransferase subunit beta) (Rab GG transferase beta) (Rab GGTase beta). [Source:Uniprot/SWISSPROT;Acc:Q08603]
16.9851 -3.38 8.27762e-07 330 16 5 52 [+] picture button
Tubgcp5_predicted ENSRNOT00000015789 NOT ANNOTATED
15.8679 -8.36 1e-06 700 13 1 12 [+] picture button
Frrs1 ENSRNOT00000021988 ferric-chelate reductase 1 [Source:MarkerSymbol;Acc:MGI:108076]
15.4347 -17.83 1.92139e-06 700 16 2 29 [+] picture button
Mark1 ENSRNOT00000003198 Serine/threonine-protein kinase MARK1 (EC 2.7.11.1) (MAP/microtubule affinity-regulating kinase 1). [Source:Uniprot/SWISSPROT;Acc:O08678]
15.3746 -13.07 6.01013e-06 700 14 8 15 [+] picture button
Tubgcp5_predicted ENSRNOT00000055989 Gamma-tubulin complex component 5 (GCP-5). [Source:Uniprot/SWISSPROT;Acc:Q96RT8]Gamma-tubulin complex component 5 (GCP-5). [Source:Uniprot/SWISSPROT;Acc:Q96RT8] BY ORTHOLOGY TO:ENSMMUT00000007789
16.0152 -7 8.34914e-06 499 20 6 37 [+] picture button
ENSRNOT00000060306 NOT ANNOTATED
16.6696 -21.47 1.44043e-05 700 11 1 15 [+] picture button
Mmp19_predicted ENSRNOT00000008909 Matrix metalloproteinase-19 precursor (EC 3.4.24.-) (MMP-19) (Matrix metalloproteinase RASI) (MMP-18). [Source:Uniprot/SWISSPROT;Acc:Q99542]Matrix metalloproteinase-19 precursor (EC 3.4.24.-) (MMP-19) (Matrix metalloproteinase RASI) (MMP-18). [Source:Uniprot/SWISSPROT;Acc:Q99542] BY ORTHOLOGY TO:ENSMMUT00000008819
16.3827 -14.74 1.61287e-05 700 14 3 19 [+] picture button
Q9D6J0_MOUSE ENSRNOT00000061274 Adult male hippocampus cDNA, RIKEN full-length enriched library, clone:2900019J01 product:hypothetical Serine-rich region profile containing protein, full insert sequence. [Source:Uniprot/SPTREMBL;Acc:Q9D6J0]
16.0051 -10.77 1.80807e-05 700 14 1 21 [+] picture button
Stxbp4_predicted ENSRNOT00000041119 Syntaxin-binding protein 4 (Syntaxin 4-interacting protein) (STX4- interacting protein) (Synip). [Source:Uniprot/SWISSPROT;Acc:Q6ZWJ1]Syntaxin-binding protein 4 (Syntaxin 4-interacting protein) (STX4- interacting protein) (Synip). [Source:Uniprot/SWISSPROT;Acc:Q6ZWJ1] BY ORTHOLOGY TO:SINFRUT00000148810
15.6981 -17.17 2.5151e-05 700 22 1 28 [+] picture button
Irx3_predicted ENSRNOT00000015583 Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1). [Source:Uniprot/SWISSPROT;Acc:P78415]Iroquois-class homeodomain protein IRX-3 (Iroquois homeobox protein 3) (Homeodomain protein IRXB1). [Source:Uniprot/SWISSPROT;Acc:P78415] BY ORTHOLOGY TO:ENSCAFT00000015031
15.7003 -3.38 4.01221e-05 339 15 6 38 [+] picture button
Fam3c ENSRNOT00000007886 family with sequence similarity 3, member C [Source:RefSeq_peptide;Acc:NP_942066]
17.0678 -18.74 4.06323e-05 700 18 6 29 [+] picture button
Olfml2b_predicted ENSRNOT00000004117 olfactomedin-like 2B [Source:RefSeq_peptide;Acc:NP_056256]olfactomedin-like 2B [Source:RefSeq_peptide;Acc:NP_056256] BY ORTHOLOGY TO:ENST00000294794
16.5093 -3.63 4.82433e-05 470 17 5 33 [+] picture button
Tmod3 ENSRNOT00000013852 tropomodulin 3 [Source:RefSeq_peptide;Acc:NP_001011997]
16.2123 -16.85 5.26518e-05 474 18 4 30 [+] picture button
Bag3 ENSRNOT00000027616 Bcl2-associated athanogene 3 [Source:RefSeq_peptide;Acc:NP_001011936]
15.253 -5.78 5.58183e-05 502 19 7 35 [+] picture button
RGD1564178_predicted ENSRNOT00000020643 Growth differentiation factor 3. [Source:Uniprot/SPTREMBL;Acc:A2SY89]
16.1066 -11.36 5.62999e-05 700 15 1 17 [+] picture button
Crim1_predicted ENSRNOT00000005983 Cysteine-rich motor neuron 1 protein precursor (CRIM-1). [Source:Uniprot/SWISSPROT;Acc:Q7T3Q2]Cysteine-rich motor neuron 1 protein precursor (CRIM-1). [Source:Uniprot/SWISSPROT;Acc:Q7T3Q2] BY ORTHOLOGY TO:ENSDART00000050534
16.2103 -17.36 5.75189e-05 700 23 8 36 [+] picture button
Gpr27 ENSRNOT00000014455 Probable G-protein coupled receptor 27 (Super conserved receptor expressed in brain 1). [Source:Uniprot/SWISSPROT;Acc:Q9JJH3]
16.9354 -16.9 6.59036e-05 700 19 5 26 [+] picture button
Abca2 ENSRNOT00000020339 ATP-binding cassette sub-family A member 2 (ATP-binding cassette transporter 2) (ATP-binding cassette 2). [Source:Uniprot/SWISSPROT;Acc:Q9ESR9]
16.8134 -17.47 6.6075e-05 655 17 4 27 [+] picture button
RGD1308329_predicted ENSRNOT00000011061 WW domain-containing protein 1 (Kidney and brain protein) (KIBRA) (HBeAg-binding protein 3). [Source:Uniprot/SWISSPROT;Acc:Q8IX03]WW domain-containing protein 1 (Kidney and brain protein) (KIBRA) (HBeAg-binding protein 3). [Source:Uniprot/SWISSPROT;Acc:Q8IX03] BY ORTHOLOGY TO:ENSGALT00000002822
17.59 -10.98 7.05981e-05 390 16 7 44 [+] picture button
LOC683924 ENSRNOT00000011217 CDNA FLJ31166 fis, clone KIDNE1000143 (SWRP5927). [Source:Uniprot/SPTREMBL;Acc:Q96NA7]CDNA FLJ31166 fis, clone KIDNE1000143 (SWRP5927). [Source:Uniprot/SPTREMBL;Acc:Q96NA7] BY ORTHOLOGY TO:ENSGALT00000022982
15.6605 -10.82 7.57421e-05 700 12 2 18 [+] picture button
RGD1562922_predicted ENSRNOT00000037446 ankyrin repeat and SOCS box-containing protein 10 [Source:RefSeq_peptide;Acc:NP_543147]ankyrin repeat and SOCS box-containing protein 10 [Source:RefSeq_peptide;Acc:NP_543147] BY ORTHOLOGY TO:ENST00000377867
15.3441 -15.73 7.91357e-05 700 20 3 26 [+] picture button
Olr720_predicted ENSRNOT00000008676 olfactory receptor Olr720 [Source:RefSeq_peptide;Acc:NP_001001067]
15.9403 -4.76 0.000112353 700 6 2 13 [+] picture button
Yeats4_predicted ENSRNOT00000007580 YEATS domain-containing protein 4 (Glioma-amplified sequence-41) (Gas41) (NuMA-binding protein 1) (NuBI-1) (NuBI1). [Source:Uniprot/SWISSPROT;Acc:O95619]YEATS domain-containing protein 4 (Glioma-amplified sequence-41) (Gas41) (NuMA-binding protein 1) (NuBI-1) (NuBI1). [Source:Uniprot/SWISSPROT;Acc:O95619] BY ORTHOLOGY TO:ENSMODT00000025936
15.1842 -6.58 0.000116676 484 18 3 38 [+] picture button
Susd3_predicted ENSRNOT00000032997 NOT ANNOTATED
15.1793 -13.52 0.000118088 640 16 1 20 [+] picture button
Ets2 ENSRNOT00000002247 C-ets-2 protein. [Source:Uniprot/SWISSPROT;Acc:P15036]C-ets-2 protein. [Source:Uniprot/SWISSPROT;Acc:P15036] BY ORTHOLOGY TO:ENSOANT00000010247
15.5965 -11.12 0.000121749 700 16 3 23 [+] picture button
Susd3_predicted ENSRNOT00000022168 Sushi domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q96L08]Sushi domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q96L08] BY ORTHOLOGY TO:ENSGALT00000008406
15.1377 -13.52 0.000130543 700 20 4 35 [+] picture button
Chrnb4 ENSRNOT00000040753 Neuronal acetylcholine receptor subunit beta-4 precursor (Neuronal acetylcholine receptor non-alpha-2 chain) (N-alpha 2). [Source:Uniprot/SWISSPROT;Acc:P12392]
15.2456 -3.73 0.000131141 700 11 2 14 [+] picture button
Epb4.1l2 ENSRNOT00000037224 erythrocyte protein band 4.1-like 2 [Source:MarkerSymbol;Acc:MGI:103009]
15.3563 -7.96 0.000135035 700 7 1 5 [+] picture button
Hspb3 ENSRNOT00000014627 Heat-shock protein beta-3 (HspB3). [Source:Uniprot/SWISSPROT;Acc:Q9QZ58]
16.2827 -11.34 0.000137814 700 17 4 25 [+] picture button
Pgr ENSRNOT00000038313 Progesterone receptor (PR). [Source:Uniprot/SWISSPROT;Acc:Q63449]
17.8514 -11.49 0.000140594 283 17 5 62 [+] picture button
Kcnmb4 ENSRNOT00000030847 Calcium-activated potassium channel subunit beta 4 (Calcium-activated potassium channel, subfamily M subunit beta 4) (Maxi K channel subunit beta 4) (BK channel subunit beta 4) (Slo-beta 4) (K(VCA)beta 4) (Charybdotoxin receptor subunit beta 4) (BKbeta4). [Source:Uniprot/SWISSPROT;Acc:Q9ESK8]
16.3699 -12.16 0.000151946 361 20 6 52 [+] picture button
Zfpm2_predicted ENSRNOT00000005468 F21A9.2 [Source:RefSeq_peptide;Acc:NP_491204]F21A9.2 [Source:RefSeq_peptide;Acc:NP_491204] BY ORTHOLOGY TO:F21A9.2
15.0743 -8.89 0.000152046 700 16 14 35 [+] picture button
Zfpm2_predicted ENSRNOT00000029419 NOT ANNOTATED
15.0743 -8.89 0.000152046 700 11 1 14 [+] picture button
Wdsub1 ENSRNOT00000033947 WD repeat, SAM and U-box domain-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q5FVN8]
15.1068 -8.75 0.000152511 700 11 1 11 [+] picture button
Rbm28_predicted ENSRNOT00000007777 RNA-binding protein 28 (RNA-binding motif protein 28). [Source:Uniprot/SWISSPROT;Acc:Q9NW13]RNA-binding protein 28 (RNA-binding motif protein 28). [Source:Uniprot/SWISSPROT;Acc:Q9NW13] BY ORTHOLOGY TO:ENSORLT00000012080
15.3002 -19.5 0.000166671 722 15 4 16 [+] picture button
RGD1308276 ENSRNOT00000027526 Protein FAM26B. [Source:Uniprot/SWISSPROT;Acc:Q5RJQ8]
15.8243 -10.97 0.000181862 492 21 5 34 [+] picture button
LOC686566 ENSRNOT00000038519 Grainyhead-like protein 1 homolog (Transcription factor CP2-like 2) (Transcription factor LBP-32) (NH32) (Mammalian grainyhead). [Source:Uniprot/SWISSPROT;Acc:Q9NZI5]Grainyhead-like protein 1 homolog (Transcription factor CP2-like 2) (Transcription factor LBP-32) (NH32) (Mammalian grainyhead). [Source:Uniprot/SWISSPROT;Acc:Q9NZI5] BY ORTHOLOGY TO:ENSPTRT00000021702
16.3335 -14.7 0.000197703 700 17 4 31 [+] picture button
Nmd3_predicted ENSRNOT00000012417 NMD3 homolog (S. cerevisiae) [Source:MarkerSymbol;Acc:MGI:2140103]NMD3 homolog (S. cerevisiae) [Source:MarkerSymbol;Acc:MGI:2140103] BY ORTHOLOGY TO:ENSMUST00000029358
15.5163 -8.89 0.000241925 700 15 3 20 [+] picture button
LOC689240 ENSRNOT00000023678 Neurobeachin-like 1 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 17 protein). [Source:Uniprot/SWISSPROT;Acc:Q6ZS30]Neurobeachin-like 1 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 17 protein). [Source:Uniprot/SWISSPROT;Acc:Q6ZS30] BY ORTHOLOGY TO:ENSMODT00000037307
16.5888 -16.3 0.000243483 700 13 7 20 [+] picture button
Slc38a1 ENSRNOT00000008138 solute carrier family 38, member 1 [Source:RefSeq_peptide;Acc:NP_620187]
15.4334 -4.05 0.00025046 430 16 5 32 [+] picture button
Olr51_predicted ENSRNOT00000020678 olfactory receptor Olr51 [Source:RefSeq_peptide;Acc:NP_001001021]
16.3864 -18.01 0.000250841 700 14 2 17 [+] picture button
Fbxo38 ENSRNOT00000025790 F-box protein 38 [Source:MarkerSymbol;Acc:MGI:2444639]
17.0555 -9.06 0.000251568 216 10 10 23 [+] picture button
Nudt9 ENSRNOT00000002973 ADP-ribose pyrophosphatase, mitochondrial precursor (EC 3.6.1.13) (ADP-ribose diphosphatase) (Adenosine diphosphoribose pyrophosphatase) (ADPR-PPase) (ADP-ribose phosphohydrolase) (Nucleoside diphosphate- linked moiety X motif 9) (Nudix motif 9). [Source:Uniprot/SWISSPROT;Acc:Q5XIG0]
16.8281 -6 0.000257108 247 11 5 34 [+] picture button
ENSRNOT00000052253 NOT ANNOTATED
15.6561 -13.37 0.000257693 700 11 2 26 [+] picture button
Atpbd1c ENSRNOT00000001722 protein x 0004 [Source:RefSeq_peptide;Acc:NP_973720]
16.6007 -5.9 0.000290309 262 14 4 56 [+] picture button
Exosc7 ENSRNOT00000005975 Exosc7 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5EB65]
17.1692 -7.62 0.000321179 127 4 4 15 [+] picture button
Tex14_predicted ENSRNOT00000009077 Testis-expressed protein 14 (Testis-expressed sequence 14) (Protein kinase-like protein SgK307) (Sugen kinase 307). [Source:Uniprot/SWISSPROT;Acc:Q8IWB6]Testis-expressed protein 14 (Testis-expressed sequence 14) (Protein kinase-like protein SgK307) (Sugen kinase 307). [Source:Uniprot/SWISSPROT;Acc:Q8IWB6] BY ORTHOLOGY TO:ENSMODT00000018640
15.1419 -6.9 0.000325936 700 22 3 37 [+] picture button
RGD1306783 ENSRNOT00000003636 Uncharacterized protein C1orf156 homolog. [Source:Uniprot/SWISSPROT;Acc:Q4KM84]
17.1124 -15.29 0.000388698 700 13 3 23 [+] picture button
Agxt2 ENSRNOT00000059952 Alanine--glyoxylate aminotransferase 2, mitochondrial precursor (EC 2.6.1.44) ((R)-3-amino-2-methylpropionate--pyruvate transaminase) (EC 2.6.1.40) (AGT 2) (Beta-alanine-pyruvate aminotransferase) (Beta- ALAAT II) (D-AIBAT). [Source:Uniprot/SWISSPROT;Acc:Q64565]
15.5878 -12.25 0.000419255 604 17 3 24 [+] picture button
Q4G022_RAT ENSRNOT00000005122 Asna1 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q4G022]
15.3499 -15.59 0.00043985 310 15 8 65 [+] picture button

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Download table: GFF TXT
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