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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Rattus norvegicus and rno-let-7b

844 hits found.


Page 1 of 17
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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hshin7 ENSRNOT00000030476 Ubiquitin thioesterase OTU1 (EC 3.1.2.-). [Source:Uniprot/SWISSPROT;Acc:Q32Q05]
19.6707 -25.57 9.20453e-14 175 8 7 20 [+] picture button
ENSRNOT00000047198 Tripartite motif-containing protein 71 (Lin-41 homolog). [Source:Uniprot/SWISSPROT;Acc:Q2Q1W2]Tripartite motif-containing protein 71 (Lin-41 homolog). [Source:Uniprot/SWISSPROT;Acc:Q2Q1W2] BY ORTHOLOGY TO:ENSXETT00000033413
16.8134 -22.71 1.11674e-10 700 17 7 25 [+] picture button
Adamts8_predicted ENSRNOT00000007358 ADAMTS8 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5FWF1]ADAMTS8 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5FWF1] BY ORTHOLOGY TO:ENSCAFT00000015862
16.8213 -22.62 5.55098e-10 700 21 9 32 [+] picture button
Adck1 ENSRNOT00000016962 aarF domain containing kinase 1 [Source:MarkerSymbol;Acc:MGI:1919363]
16.5939 -14.49 7.72334e-09 700 25 4 46 [+] picture button
LOC500947 ENSRNOT00000013927 LOC500947 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5M7U7]
16.4646 -23.27 2.81153e-08 1087 7 6 9 [+] picture button
Sema4c_predicted ENSRNOT00000021956 Semaphorin-4C precursor. [Source:Uniprot/SWISSPROT;Acc:Q9C0C4]Semaphorin-4C precursor. [Source:Uniprot/SWISSPROT;Acc:Q9C0C4] BY ORTHOLOGY TO:ENSORLT00000019166
17.4805 -24.7 2.94605e-08 700 26 9 60 [+] picture button
Pias4 ENSRNOT00000027441 Pias4 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q4G041]
16.485 -22.06 5.95665e-08 824 21 2 33 [+] picture button
Nr6a1 ENSRNOT00000018751 Germ cell nuclear factor (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6EUW0]
17.4235 -18.95 6.19932e-08 700 18 12 34 [+] picture button
Myc ENSRNOT00000006188 Myc proto-oncogene protein (c-Myc) (Transcription factor p64). [Source:Uniprot/SWISSPROT;Acc:P09416]
18.6473 -22.3 7.34567e-08 211 8 13 20 [+] picture button
Rnf20 ENSRNOT00000059869 ring finger protein 20 [Source:MarkerSymbol;Acc:MGI:1925927]
16.7567 -24.47 8.72291e-08 889 18 6 27 [+] picture button
Npepl1 ENSRNOT00000034915 aminopeptidase-like 1 [Source:MarkerSymbol;Acc:MGI:2448523]
16.5133 -21.56 9.91459e-08 452 18 8 56 [+] picture button
Hspbp1 ENSRNOT00000024251 Hsp70-binding protein 1 (HspBP1) (Heat shock protein-binding protein 1) (Hsp70-interacting protein 1). [Source:Uniprot/SWISSPROT;Acc:Q6IMX7]
18.0788 -22.43 1.91164e-07 247 14 5 41 [+] picture button
LOC681499 ENSRNOT00000023067 Tubulin--tyrosine ligase-like protein 4. [Source:Uniprot/SWISSPROT;Acc:Q14679]Tubulin--tyrosine ligase-like protein 4. [Source:Uniprot/SWISSPROT;Acc:Q14679] BY ORTHOLOGY TO:ENSPTRT00000023959
16.5939 -19.05 2.15448e-07 700 18 8 34 [+] picture button
ENSRNOT00000011023 Ubiquitin-conjugating enzyme E2 R1 (EC 6.3.2.19) (Ubiquitin-protein ligase R1) (Ubiquitin-conjugating enzyme E2-32 kDa complementing) (E2- CDC34). [Source:Uniprot/SWISSPROT;Acc:P49427]Ubiquitin-conjugating enzyme E2 R1 (EC 6.3.2.19) (Ubiquitin-protein ligase R1) (Ubiquitin-conjugating enzyme E2-32 kDa complementing) (E2- CDC34). [Source:Uniprot/SWISSPROT;Acc:P49427] BY ORTHOLOGY TO:ENSCAFT00000002971
19.4421 -27.73 2.25526e-07 316 18 5 57 [+] picture button
Zfyve26_predicted ENSRNOT00000016380 zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161]zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161] BY ORTHOLOGY TO:ENSMODT00000012851
17.1693 -20.39 3.52332e-07 700 18 4 36 [+] picture button
RGD1564821_predicted ENSRNOT00000006946 N-acetylglucosamine-1-phosphotransferase subunits alpha/beta precursor (EC 2.7.8.17) (GlcNAc-1-phosphotransferase alpha/beta subunits) (UDP- N-acetylglucosamine-1-phosphotransferase alpha/beta subunits) (Stealth protein GNPTAB) [Contains: N-acetylglucosam [Source:Uniprot/SWISSPROT;Acc:Q3T906]N-acetylglucosamine-1-phosphotransferase subunits alpha/beta precursor (EC 2.7.8.17) (GlcNAc-1-phosphotransferase alpha/beta subunits) (UDP- N-acetylglucosamine-1-phosphotransferase alpha/beta subunits) (Stealth protein GNPTAB) [Contains: N-acetylglucosam [Source:Uniprot/SWISSPROT;Acc:Q3T906] BY ORTHOLOGY TO:ENSMMUT00000017610
17.3121 -16.39 3.81097e-07 558 14 8 24 [+] picture button
Lrig2_predicted ENSRNOT00000027042 Leucine-rich repeats and immunoglobulin-like domains protein 2 precursor (LIG-2). [Source:Uniprot/SWISSPROT;Acc:O94898]Leucine-rich repeats and immunoglobulin-like domains protein 2 precursor (LIG-2). [Source:Uniprot/SWISSPROT;Acc:O94898] BY ORTHOLOGY TO:ENSMMUT00000026841
18.9325 -25.02 5.74124e-07 700 17 7 32 [+] picture button
Acvr1b ENSRNOT00000009345 Activin receptor type 1B precursor (EC 2.7.11.30) (ACTR-IB) (Serine/threonine-protein kinase receptor R2) (SKR2). [Source:Uniprot/SWISSPROT;Acc:P80202]
16.5436 -28.17 8.22493e-07 745 18 7 30 [+] picture button
Slc35d2_predicted ENSRNOT00000036212 UGNT. [Source:Uniprot/SPTREMBL;Acc:Q8AV24]UGNT. [Source:Uniprot/SPTREMBL;Acc:Q8AV24] BY ORTHOLOGY TO:SINFRUT00000160116
18.1233 -19.29 8.58875e-07 442 16 6 29 [+] picture button
Apbb3 ENSRNOT00000024313 Amyloid beta A4 precursor protein-binding family B member 3 (Fe65-like protein 2) (Fe65L2). [Source:Uniprot/SWISSPROT;Acc:O35827]
17.8514 -22.02 9.16424e-07 218 9 6 25 [+] picture button
Stxbp5 ENSRNOT00000049699 Syntaxin-binding protein 5 (Tomosyn-1) (Lethal(2) giant larvae protein homolog 3). [Source:Uniprot/SWISSPROT;Acc:Q9WU70]
17.3198 -20.16 9.4961e-07 700 13 12 23 [+] picture button
ENSRNOT00000048206 NOT ANNOTATED
17.0341 -27.84 1e-06 700 14 1 13 [+] picture button
LOC257650 ENSRNOT00000038939 hippyragranin [Source:RefSeq_peptide;Acc:NP_671483]
16.8487 -24.43 1e-06 700 13 1 16 [+] picture button
Alkbh4_predicted ENSRNOT00000001939 Alkylated repair protein alkB homolog 4. [Source:Uniprot/SWISSPROT;Acc:Q9NXW9]Alkylated repair protein alkB homolog 4. [Source:Uniprot/SWISSPROT;Acc:Q9NXW9] BY ORTHOLOGY TO:ENST00000292566
16.6976 -22.48 1e-06 700 21 2 27 [+] picture button
RGD1560496_predicted ENSRNOT00000009620 Interferon-induced helicase C domain-containing protein 1 (EC 3.6.1.-) (Interferon-induced with helicase C domain protein 1) (Helicase with 2 CARD domains) (Helicard) (Melanoma differentiation-associated protein 5) (MDA-5) (RNA helicase-DEAD box protein 1 [Source:Uniprot/SWISSPROT;Acc:Q9BYX4]Interferon-induced helicase C domain-containing protein 1 (EC 3.6.1.-) (Interferon-induced with helicase C domain protein 1) (Helicase with 2 CARD domains) (Helicard) (Melanoma differentiation-associated protein 5) (MDA-5) (RNA helicase-DEAD box protein 1 [Source:Uniprot/SWISSPROT;Acc:Q9BYX4] BY ORTHOLOGY TO:ENSGALT00000018067
17.4443 -20.8 1.16427e-06 700 18 5 41 [+] picture button
PENK_RAT ENSRNOT00000011892 Proenkephalin A precursor [Contains: Synenkephalin; Met-enkephalin (Opioid growth factor) (OGF); Met-enkephalin-Arg-Gly-Leu; Leu- enkephalin; Met-enkephalin-Arg-Phe]. [Source:Uniprot/SWISSPROT;Acc:P04094]
18.7774 -24.81 1.46981e-06 314 18 8 53 [+] picture button
RGD1560408_predicted ENSRNOT00000024701 mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isoenzyme A [Source:RefSeq_peptide;Acc:NP_036346]mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isoenzyme A [Source:RefSeq_peptide;Acc:NP_036346] BY ORTHOLOGY TO:ENSXETT00000042031
16.7593 -14.19 1.54834e-06 372 15 8 39 [+] picture button
Pld3 ENSRNOT00000057177 Phospholipase D3 (EC 3.1.4.4) (PLD 3) (Choline phosphatase 3) (Phosphatidylcholine-hydrolyzing phospholipase D3). [Source:Uniprot/SWISSPROT;Acc:Q5FVH2]
17.711 -25.45 1.60093e-06 304 17 7 46 [+] picture button
Acadvl ENSRNOT00000024973 Very-long-chain specific acyl-CoA dehydrogenase, mitochondrial precursor (EC 1.3.99.-) (VLCAD). [Source:Uniprot/SWISSPROT;Acc:P45953]
17.3966 -20.19 1.95969e-06 113 5 6 25 [+] picture button
RGD1563619_predicted ENSRNOT00000013880 Carboxypeptidase A4 precursor (EC 3.4.17.-) (Carboxypeptidase A3). [Source:Uniprot/SWISSPROT;Acc:Q9UI42]Carboxypeptidase A4 precursor (EC 3.4.17.-) (Carboxypeptidase A3). [Source:Uniprot/SWISSPROT;Acc:Q9UI42] BY ORTHOLOGY TO:ENSMODT00000018511
16.7185 -24.22 1.9601e-06 700 16 3 28 [+] picture button
Q4G022_RAT ENSRNOT00000005122 Asna1 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q4G022]
17.9651 -22.82 2.09836e-06 310 15 8 65 [+] picture button
Ngfb ENSRNOT00000022200 Beta-nerve growth factor precursor (Beta-NGF). [Source:Uniprot/SWISSPROT;Acc:P25427]
17.3966 -19.43 2.46281e-06 152 9 9 22 [+] picture button
Gpr156 ENSRNOT00000003773 Probable G-protein coupled receptor 156 (GABAB-related G-protein coupled receptor). [Source:Uniprot/SWISSPROT;Acc:Q8K451]
17.5273 -25.68 2.48776e-06 700 22 7 31 [+] picture button
Riok3_predicted ENSRNOT00000039377 Putative RIO-type serine/threonine-protein kinase ZK632.3 (EC 2.7.11.1). [Source:Uniprot/SWISSPROT;Acc:P34649]Putative RIO-type serine/threonine-protein kinase ZK632.3 (EC 2.7.11.1). [Source:Uniprot/SWISSPROT;Acc:P34649] BY ORTHOLOGY TO:ZK632.3.2
17.6309 -14.06 2.7829e-06 397 18 7 45 [+] picture button
RGD1561223_predicted ENSRNOT00000029602 gene model 467, (NCBI) [Source:MarkerSymbol;Acc:MGI:2685313]gene model 467, (NCBI) [Source:MarkerSymbol;Acc:MGI:2685313] BY ORTHOLOGY TO:ENSMUST00000096108
17.3198 -21.66 3.63208e-06 700 17 4 26 [+] picture button
Slc35b1 ENSRNOT00000006179 Solute carrier family 35 member B1 (UDP-galactose transporter-related protein 1) (UGTrel1). [Source:Uniprot/SWISSPROT;Acc:Q6V7K3]
17.7377 -16.48 4.15783e-06 235 11 5 33 [+] picture button
Rab11fip4_predicted ENSRNOT00000018986 RAB11 family interacting protein 4 (class II) [Source:MarkerSymbol;Acc:MGI:2442920]RAB11 family interacting protein 4 (class II) [Source:MarkerSymbol;Acc:MGI:2442920] BY ORTHOLOGY TO:ENSMUST00000092864
16.3419 -16.44 4.37854e-06 700 24 6 37 [+] picture button
Usp32_predicted ENSRNOT00000036814 TL132 protein (LOC220594), mRNA [Source:RefSeq_dna;Acc:NM_145809]TL132 protein (LOC220594), mRNA [Source:RefSeq_dna;Acc:NM_145809] BY ORTHOLOGY TO:ENSGACT00000017939
18.5368 -19.6 4.94318e-06 700 16 8 23 [+] picture button
Gipc1 ENSRNOT00000005374 PDZ domain-containing protein GIPC1 (RGS19-interacting protein 1) (GAIP C-terminus-interacting protein) (RGS-GAIP-interacting protein) (GLUT1 C-terminal-binding protein) (GLUT1CBP). [Source:Uniprot/SWISSPROT;Acc:Q9Z254]
16.5634 -21.4 5.69691e-06 516 18 6 35 [+] picture button
Josd2_predicted ENSRNOT00000026379 Josephin-2 (Josephin domain-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:Q8TAC2]Josephin-2 (Josephin domain-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:Q8TAC2] BY ORTHOLOGY TO:ENSORLT00000014254
16.9418 -22.05 5.93291e-06 147 7 8 22 [+] picture button
Coro1c_predicted ENSRNOT00000044751 Protein phosphatase Slingshot homolog 1 (EC 3.1.3.48) (EC 3.1.3.16) (SSH-1L) (hSSH-1L). [Source:Uniprot/SWISSPROT;Acc:Q8WYL5]Protein phosphatase Slingshot homolog 1 (EC 3.1.3.48) (EC 3.1.3.16) (SSH-1L) (hSSH-1L). [Source:Uniprot/SWISSPROT;Acc:Q8WYL5] BY ORTHOLOGY TO:ENST00000326495
16.4333 -19.18 5.96386e-06 700 18 7 26 [+] picture button
Map2k5 ENSRNOT00000051558 Dual specificity mitogen-activated protein kinase kinase 5 (EC 2.7.12.2) (MAP kinase kinase 5) (MAPKK 5) (MAPK/ERK kinase 5). [Source:Uniprot/SWISSPROT;Acc:Q62862]
16.8329 -18.77 6.17758e-06 337 18 5 60 [+] picture button
Rtcd1 ENSRNOT00000020149 RNA terminal phosphate cyclase domain 1 [Source:RefSeq_peptide;Acc:NP_001004227]
17.0555 -18.4 6.60249e-06 243 15 8 49 [+] picture button
Ccr7 ENSRNOT00000014163 chemokine (C-C motif) receptor 7 [Source:RefSeq_peptide;Acc:NP_955783]
17.1124 -23.53 6.60829e-06 700 19 6 25 [+] picture button
Prss22_predicted ENSRNOT00000060888 Brain-specific serine protease 4 precursor (EC 3.4.21.-) (BSSP-4) (Serine protease 22) (Serine protease 26) (Tryptase epsilon). [Source:Uniprot/SWISSPROT;Acc:Q9GZN4]Brain-specific serine protease 4 precursor (EC 3.4.21.-) (BSSP-4) (Serine protease 22) (Serine protease 26) (Tryptase epsilon). [Source:Uniprot/SWISSPROT;Acc:Q9GZN4] BY ORTHOLOGY TO:ENSOANT00000006171
17.624 -15.31 7.4317e-06 269 12 6 38 [+] picture button
Stard5_predicted ENSRNOT00000037996 Transmembrane channel-like protein 3. [Source:Uniprot/SWISSPROT;Acc:Q7Z5M5]Transmembrane channel-like protein 3. [Source:Uniprot/SWISSPROT;Acc:Q7Z5M5] BY ORTHOLOGY TO:ENSMMUT00000016202
17.7347 -22.33 7.71544e-06 700 17 2 24 [+] picture button
RGD1309656_predicted ENSRNOT00000058788 transmembrane anterior posterior transformation 1 [Source:RefSeq_peptide;Acc:NP_699196]transmembrane anterior posterior transformation 1 [Source:RefSeq_peptide;Acc:NP_699196] BY ORTHOLOGY TO:ENSGACT00000022542
16.8013 -22.81 7.87961e-06 700 13 6 21 [+] picture button
Dym_predicted ENSRNOT00000024950 Dymeclin (Dyggve-Melchior-Clausen syndrome protein). [Source:Uniprot/SWISSPROT;Acc:Q7RTS9]Dymeclin (Dyggve-Melchior-Clausen syndrome protein). [Source:Uniprot/SWISSPROT;Acc:Q7RTS9] BY ORTHOLOGY TO:ENST00000269445
16.3733 -15.56 7.89303e-06 224 12 5 36 [+] picture button
RGD1560783_predicted ENSRNOT00000044274 Protein FAM118A. [Source:Uniprot/SWISSPROT;Acc:Q9NWS6]Protein FAM118A. [Source:Uniprot/SWISSPROT;Acc:Q9NWS6] BY ORTHOLOGY TO:ENSMMUT00000032369
17.0087 -19.13 8.14871e-06 700 17 6 27 [+] picture button
Pbx2 ENSRNOT00000041201 pre-B-cell leukemia homeobox 2 [Source:RefSeq_peptide;Acc:NP_001002828]
17.1322 -27.88 8.38662e-06 700 17 5 20 [+] picture button

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Download table: GFF TXT
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