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Target Listing




Highlighted rows in the table indicate genes with published known targets


All miRNA hits for Rattus norvegicus

30164 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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RGD1562291_predicted ENSRNOT00000061693 Forkhead box protein N2 (Human T-cell leukemia virus enhancer factor). [Source:Uniprot/SWISSPROT;Acc:P32314]Forkhead box protein N2 (Human T-cell leukemia virus enhancer factor). [Source:Uniprot/SWISSPROT;Acc:P32314] BY ORTHOLOGY TO:ENSXETT00000049020
279 -325 1.73887e-17 700 17 6 21 [+] picture button
A430110N23Rik ENSRNOT00000022480 RIKEN cDNA A430110N23 gene [Source:MarkerSymbol;Acc:MGI:3606211]
423 -545 1.07251e-16 700 26 2 31 [+] picture button
hshin7 ENSRNOT00000030476 Ubiquitin thioesterase OTU1 (EC 3.1.2.-). [Source:Uniprot/SWISSPROT;Acc:Q32Q05]
145 -137 0.0000000000000920453 175 8 7 20 [+] picture button
Nr6a1 ENSRNOT00000018751 Germ cell nuclear factor (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6EUW0]
301 -364 0.000000000000199162 700 18 12 34 [+] picture button
RICS_predicted ENSRNOT00000011589 Rho GTPase-activating protein [Source:RefSeq_peptide;Acc:NP_055530]Rho GTPase-activating protein [Source:RefSeq_peptide;Acc:NP_055530] BY ORTHOLOGY TO:SINFRUT00000140193
52 -65 0.000000000000545163 82 3 12 14 [+] picture button
Btbd3_predicted ENSRNOT00000010835 BTB/POZ domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q9Y2F9]BTB/POZ domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q9Y2F9] BY ORTHOLOGY TO:ENSMMUT00000026589
275 -277 0.00000000000108402 431 16 4 29 [+] picture button
Pde3a ENSRNOT00000032843 cGMP-inhibited 3',5'-cyclic phosphodiesterase A (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase A) (CGI-PDE A). [Source:Uniprot/SWISSPROT;Acc:Q62865]
339 -378 0.00000000000415124 700 20 11 32 [+] picture button
Atxn1 ENSRNOT00000023140 Ataxin-1 (Spinocerebellar ataxia type 1 protein homolog). [Source:Uniprot/SWISSPROT;Acc:Q63540]
295 -396 0.00000000000995746 700 18 9 31 [+] picture button
C030046E11Rik ENSRNOT00000021783 RIKEN cDNA C030046E11 gene [Source:MarkerSymbol;Acc:MGI:1924893]
313 -385 0.0000000000221662 700 19 7 29 [+] picture button
Glra1 ENSRNOT00000018205 Glycine receptor subunit alpha-1 precursor (Glycine receptor 48 kDa subunit) (Glycine receptor strychnine-binding subunit). [Source:Uniprot/SWISSPROT;Acc:P07727]
244 -292 0.0000000000228155 700 15 8 22 [+] picture button
Nsmaf ENSRNOT00000014289 neutral sphingomyelinase (N-SMase) activation associated factor [Source:RefSeq_peptide;Acc:NP_852054]
250 -283 0.0000000000247382 700 15 11 37 [+] picture button
Pde3b ENSRNOT00000015498 cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B) (CGIPDE1). [Source:Uniprot/SWISSPROT;Acc:Q63085]
132 -164 0.0000000000261536 990 8 11 15 [+] picture button
RGD1307610_predicted ENSRNOT00000033933 Ribonucleoprotein PTB-binding 2 (Protein raver-2). [Source:Uniprot/SWISSPROT;Acc:Q9HCJ3]Ribonucleoprotein PTB-binding 2 (Protein raver-2). [Source:Uniprot/SWISSPROT;Acc:Q9HCJ3] BY ORTHOLOGY TO:ENSMODT00000001519
250 -318 0.000000000041642 700 15 7 22 [+] picture button
Parp16 ENSRNOT00000045106 Poly [ADP-ribose] polymerase 16 (EC 2.4.2.30) (PARP-16). [Source:Uniprot/SWISSPROT;Acc:Q5U2Q4]
247 -308 0.0000000000438369 700 15 7 24 [+] picture button
Fst ENSRNOT00000015680 Follistatin precursor (FS) (Activin-binding protein). [Source:Uniprot/SWISSPROT;Acc:P21674]
335 -354 0.0000000000542009 700 20 11 34 [+] picture button
Arpc1b ENSRNOT00000001315 Actin-related protein 2/3 complex subunit 1B (ARP2/3 complex 41 kDa subunit) (p41-ARC). [Source:Uniprot/SWISSPROT;Acc:O88656]
291 -314 0.0000000000630766 290 17 6 50 [+] picture button
Ptprg ENSRNOT00000048742 protein tyrosine phosphatase, receptor type, G [Source:RefSeq_peptide;Acc:NP_599183]
299 -331 0.0000000000719033 700 18 12 33 [+] picture button
ENSRNOT00000047198 Tripartite motif-containing protein 71 (Lin-41 homolog). [Source:Uniprot/SWISSPROT;Acc:Q2Q1W2]Tripartite motif-containing protein 71 (Lin-41 homolog). [Source:Uniprot/SWISSPROT;Acc:Q2Q1W2] BY ORTHOLOGY TO:ENSXETT00000033413
283 -369 0.000000000111674 700 17 7 25 [+] picture button
Dock4 ENSRNOT00000006709 dedicator of cytokinesis 4 [Source:MarkerSymbol;Acc:MGI:1918006]
127 -148 0.000000000119436 1845 8 6 13 [+] picture button
Nedd9 ENSRNOT00000019706 neural precursor cell expressed, developmentally down-regulated gene 9 [Source:RefSeq_peptide;Acc:NP_001011922]
227 -236 0.000000000128591 700 14 6 19 [+] picture button
Col7a1_predicted ENSRNOT00000027994 Collagen alpha-1(VII) chain precursor (Long-chain collagen) (LC collagen). [Source:Uniprot/SWISSPROT;Acc:Q02388]Collagen alpha-1(VII) chain precursor (Long-chain collagen) (LC collagen). [Source:Uniprot/SWISSPROT;Acc:Q02388] BY ORTHOLOGY TO:ENSOANT00000002945
361 -534 0.0000000001345 700 22 6 36 [+] picture button
LOC689054 ENSRNOT00000034485 Lin-28 homolog B. [Source:Uniprot/SWISSPROT;Acc:Q6ZN17]Lin-28 homolog B. [Source:Uniprot/SWISSPROT;Acc:Q6ZN17] BY ORTHOLOGY TO:SINFRUT00000134438
290 -342 0.000000000136268 700 18 6 29 [+] picture button
Sh3md2 ENSRNOT00000013816 putative scaffolding protein POSH [Source:RefSeq_peptide;Acc:NP_942059]
211 -211 0.000000000138591 700 13 9 16 [+] picture button
Kcnk10 ENSRNOT00000005175 Potassium channel subfamily K member 10 (Outward rectifying potassium channel protein TREK-2) (TREK-2 K(+) channel subunit). [Source:Uniprot/SWISSPROT;Acc:Q9JIS4]
315 -376 0.000000000142047 700 19 9 36 [+] picture button
Gba2 ENSRNOT00000022002 Non-lysosomal glucosylceramidase (EC 3.2.1.45) (NLGase) (Glucosylceramidase 2) (Beta-glucocerebrosidase 2) (Beta-glucosidase 2). [Source:Uniprot/SWISSPROT;Acc:Q5M868]
281 -312 0.000000000151393 282 16 8 40 [+] picture button
Ihpk2 ENSRNOT00000043454 Inositol hexakisphosphate kinase 2 (EC 2.7.4.21) (InsP6 kinase 2) (P(i)-uptake stimulator) (PiUS). [Source:Uniprot/SWISSPROT;Acc:Q9R0U1]
279 -316 0.000000000162292 280 16 10 55 [+] picture button
Lrp2 ENSRNOT00000050675 Low-density lipoprotein receptor-related protein 2 precursor (Megalin) (Glycoprotein 330) (gp330). [Source:Uniprot/SWISSPROT;Acc:P98158]
311 -381 0.000000000180045 700 19 5 25 [+] picture button
Prdm1_predicted ENSRNOT00000000355 PRDM1 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q68EQ6]PRDM1 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q68EQ6] BY ORTHOLOGY TO:ENSXETT00000018988
300 -323 0.000000000211808 700 18 6 30 [+] picture button
Nipa2_predicted ENSRNOT00000018028 Non-imprinted in Prader-Willi/Angelman syndrome region protein 2. [Source:Uniprot/SWISSPROT;Acc:Q8N8Q9]Non-imprinted in Prader-Willi/Angelman syndrome region protein 2. [Source:Uniprot/SWISSPROT;Acc:Q8N8Q9] BY ORTHOLOGY TO:ENSOANT00000024756
202 -166 0.000000000227916 411 12 10 23 [+] picture button
Sos2 ENSRNOT00000006425 Son of sevenless 1 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9Z1I1]
335 -396 0.000000000278677 700 20 10 47 [+] picture button
Tssk6_predicted ENSRNOT00000027953 testis-specific serine kinase 6 [Source:MarkerSymbol;Acc:MGI:2148775]testis-specific serine kinase 6 [Source:MarkerSymbol;Acc:MGI:2148775] BY ORTHOLOGY TO:ENSMUST00000050373
327 -454 0.000000000322555 700 20 4 34 [+] picture button
RGD1310121_predicted ENSRNOT00000039166 Tubulin polymerization-promoting protein (TPPP) (25 kDa brain-specific protein) (p25-alpha) (p24) (p25). [Source:Uniprot/SWISSPROT;Acc:O94811]Tubulin polymerization-promoting protein (TPPP) (25 kDa brain-specific protein) (p25-alpha) (p24) (p25). [Source:Uniprot/SWISSPROT;Acc:O94811] BY ORTHOLOGY TO:ENSOANT00000017838
92 -105 0.000000000327819 87 5 11 24 [+] picture button
Tnr ENSRNOT00000003407 Tenascin-R precursor (TN-R) (Restrictin) (Janusin) (Neural recognition molecule J1-160/180). [Source:Uniprot/SWISSPROT;Acc:Q05546]
181 -195 0.000000000330365 700 11 9 15 [+] picture button
Axl ENSRNOT00000028131 Axl receptor tyrosine kinase isoform 2 [Source:RefSeq_peptide;Acc:NP_001013165]
332 -410 0.000000000371935 700 20 8 34 [+] picture button
LOC688065 ENSRNOT00000031360 chemokine (C-C motif) ligand 1 [Source:MarkerSymbol;Acc:MGI:98258]chemokine (C-C motif) ligand 1 [Source:MarkerSymbol;Acc:MGI:98258] BY ORTHOLOGY TO:ENSMUST00000021043
302 -391 0.000000000452454 700 18 5 29 [+] picture button
Slit2 ENSRNOT00000005477 Slit homolog 2 protein precursor (Slit-2) (Fragment). [Source:Uniprot/SWISSPROT;Acc:Q9WVC1]
119 -88 0.000000000467345 173 7 8 21 [+] picture button
Ddef1_predicted ENSRNOT00000045503 130 kDa phosphatidylinositol 4,5-biphosphate-dependent ARF1 GTPase- activating protein (PIP2-dependent ARF1 GAP) (ADP-ribosylation factor- directed GTPase-activating protein 1) (ARF GTPase-activating protein 1) (Development and differentiation-enhancing f [Source:Uniprot/SWISSPROT;Acc:Q1AAU6]
212 -246 0.00000000053993 905 13 8 16 [+] picture button
Adamts8_predicted ENSRNOT00000007358 ADAMTS8 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5FWF1]ADAMTS8 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5FWF1] BY ORTHOLOGY TO:ENSCAFT00000015862
343 -405 0.000000000555098 700 21 9 32 [+] picture button
Col4a5_predicted ENSRNOT00000025677 Collagen alpha-5(IV) chain precursor. [Source:Uniprot/SWISSPROT;Acc:P29400]Collagen alpha-5(IV) chain precursor. [Source:Uniprot/SWISSPROT;Acc:P29400] BY ORTHOLOGY TO:ENSGACT00000024870
264 -285 0.000000000594948 700 16 10 27 [+] picture button
Irak2 ENSRNOT00000038964 Interleukin-1 receptor-associated kinase-like 2 (IRAK-2). [Source:Uniprot/SWISSPROT;Acc:Q4QQS0]
342 -400 0.000000000597186 700 21 6 30 [+] picture button
Lrrc8 ENSRNOT00000033934 Leucine-rich repeat-containing protein 8A. [Source:Uniprot/SWISSPROT;Acc:Q4V8I7]
235 -355 0.00000000065024 732 14 6 32 [+] picture button
Cno ENSRNOT00000008127 Cno protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5BJZ8]
281 -313 0.000000000772105 629 17 5 26 [+] picture button
Bcam ENSRNOT00000045574 basal cell adhesion molecule [Source:RefSeq_peptide;Acc:NP_113940]
285 -412 0.00000000078493 700 17 6 21 [+] picture button
RGD1307343 ENSRNOT00000043536 Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein. [Source:Uniprot/SWISSPROT;Acc:Q66HH4]
297 -285 0.000000000808441 700 18 8 29 [+] picture button
Nr3c2 ENSRNOT00000052018 Mineralocorticoid receptor (MR). [Source:Uniprot/SWISSPROT;Acc:P22199]
259 -298 0.000000000816856 700 16 11 24 [+] picture button
Sec23a ENSRNOT00000006369 SEC23A (S. cerevisiae) [Source:MarkerSymbol;Acc:MGI:1349635]
175 -199 0.00000000082223 1638 11 4 14 [+] picture button
Adora2b ENSRNOT00000003966 Adenosine A2b receptor. [Source:Uniprot/SWISSPROT;Acc:P29276]
234 -222 0.000000000822336 736 14 5 18 [+] picture button
Sv2c ENSRNOT00000024459 Synaptic vesicle glycoprotein 2C (Synaptic vesicle protein 2C). [Source:Uniprot/SWISSPROT;Acc:Q9Z2I6]
207 -200 0.000000000862042 214 12 9 35 [+] picture button
Dock3_predicted ENSRNOT00000019867 Dedicator of cytokinesis protein 3 (Modifier of cell adhesion) (Presenilin-binding protein) (PBP). [Source:Uniprot/SWISSPROT;Acc:Q8IZD9]Dedicator of cytokinesis protein 3 (Modifier of cell adhesion) (Presenilin-binding protein) (PBP). [Source:Uniprot/SWISSPROT;Acc:Q8IZD9] BY ORTHOLOGY TO:ENSGALT00000003678
329 -428 0.000000000865482 700 20 9 32 [+] picture button
Hadhb ENSRNOT00000014637 Trifunctional enzyme subunit beta, mitochondrial precursor (TP-beta) [Includes: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) (Acetyl-CoA acyltransferase) (Beta-ketothiolase)]. [Source:Uniprot/SWISSPROT;Acc:Q60587]
309 -297 0.000000000900004 479 18 7 34 [+] picture button

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