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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Pan troglodytes and ptr-miR-9

242 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Q6UIR5_PANTR ENSPTRT00000031997 Catenin alpha 1 subunit (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6UIR5]
17.2339 -18.73 4.25835e-09 939 17 7 22 [+] picture button
ENSPTRT00000058471 CCR4-NOT transcription complex, subunit 6-like [Source:MarkerSymbol;Acc:MGI:2443154]CCR4-NOT transcription complex, subunit 6-like [Source:MarkerSymbol;Acc:MGI:2443154] BY ORTHOLOGY TO:ENSMUST00000036646
16.0927 -18.7 1.04191e-08 1000 8 9 10 [+] picture button
ONECUT1 ENSPTRT00000013083 Hepatocyte nuclear factor 6 (HNF-6) (One cut domain family member 1). [Source:Uniprot/SWISSPROT;Acc:Q9UBC0]
18.2333 -17.06 1.53219e-08 400 16 12 39 [+] picture button
SMF_HUMAN ENSPTRT00000032198 SMF protein (Fragment). [Source:Uniprot/SWISSPROT;Acc:Q12766]
17.039 -23.15 3.15228e-08 936 19 9 26 [+] picture button
SACS ENSPTRT00000010508 Sacsin. [Source:Uniprot/SWISSPROT;Acc:Q9NZJ4]
16.1295 -16.43 4.92256e-08 1306 13 5 18 [+] picture button
AP3B1 ENSPTRT00000031544 AP-3 complex subunit beta-1 (Adapter-related protein complex 3 beta-1 subunit) (Beta3A-adaptin) (Adaptor protein complex AP-3 beta-1 subunit) (Clathrin assembly protein complex 3 beta-1 large chain). [Source:Uniprot/SWISSPROT;Acc:O00203]
17.2911 -15.75 5.58364e-08 572 20 9 41 [+] picture button
MPPE1 ENSPTRT00000018132 metallophosphoesterase 1 precursor [Source:RefSeq_peptide;Acc:NP_075563]
16.541 -10.38 4.44619e-07 650 13 4 27 [+] picture button
GMEB2 ENSPTRT00000025644 Glucocorticoid modulatory element-binding protein 2 (GMEB-2) (Parvovirus initiation factor p79) (PIF p79) (DNA-binding protein p79PIF). [Source:Uniprot/SWISSPROT;Acc:Q9UKD1]
17.1259 -22.24 5.08189e-07 1000 22 7 28 [+] picture button
ESM1 ENSPTRT00000031288 Endothelial cell-specific molecule 1 precursor (ESM-1 secretory protein) (ESM-1). [Source:Uniprot/SWISSPROT;Acc:Q9NQ30]
17.2497 -24.94 1.86089e-06 1006 17 5 19 [+] picture button
RNF111 ENSPTRT00000013144 E3 ubiquitin-protein ligase Arkadia (EC 6.3.2.-) (RING finger protein 111). [Source:Uniprot/SWISSPROT;Acc:Q6ZNA4]
16.1034 -20.54 1.96431e-06 1524 10 13 11 [+] picture button
LECT1 ENSPTRT00000010848 Chondromodulin-1 precursor (Chondromodulin-I) (ChM-I) (Leukocyte cell- derived chemotaxin 1) [Contains: Chondrosurfactant protein (CH-SP)]. [Source:Uniprot/SWISSPROT;Acc:O75829]
18.1503 -19.19 2.08598e-06 327 15 7 38 [+] picture button
XR_020689.1 ENSPTRT00000031801 PREDICTED: Pan troglodytes PR domain containing 6 (PRDM6), mRNA. [Source:RefSeq_dna;Acc:XR_020689]
16.3949 -16.57 2.10081e-06 800 18 10 27 [+] picture button
FBN1 ENSPTRT00000013007 Fibrillin-1 precursor. [Source:Uniprot/SWISSPROT;Acc:P35555]
16.9698 -10.55 2.49733e-06 358 15 7 34 [+] picture button
CAPSL ENSPTRT00000031174 Calcyphosin-like protein. [Source:Uniprot/SWISSPROT;Acc:Q8WWF8]
15.9515 -16.72 3.55364e-06 247 13 5 45 [+] picture button
C13orf34 ENSPTRT00000010877 Protein aurora borealis (HsBora). [Source:Uniprot/SWISSPROT;Acc:Q6PGQ7]
15.9829 -12.69 6.88784e-06 968 15 5 19 [+] picture button
DNAJC3 ENSPTRT00000010969 DnaJ homolog subfamily C member 3 (Interferon-induced, double-stranded RNA-activated protein kinase inhibitor) (Protein kinase inhibitor p58) (Protein kinase inhibitor of 58 kDa). [Source:Uniprot/SWISSPROT;Acc:Q13217]
16.741 -19.35 1.01124e-05 1000 12 6 16 [+] picture button
SLC18A2 ENSPTRT00000005678 Synaptic vesicular amine transporter (Monoamine transporter) (Vesicular amine transporter 2) (VAT2) (Solute carrier family 18 member 2). [Source:Uniprot/SWISSPROT;Acc:Q05940]
17.0834 -13.47 1.22738e-05 318 13 6 44 [+] picture button
PIGT ENSPTRT00000025213 GPI transamidase component PIG-T precursor (Phosphatidylinositol- glycan biosynthesis class T protein). [Source:Uniprot/SWISSPROT;Acc:Q969N2]
16.574 -15.73 1.66393e-05 418 19 5 52 [+] picture button
SIA8F_PANTR ENSPTRT00000004279 Alpha-2,8-sialyltransferase 8F (EC 2.4.99.-) (ST8Sia VI). [Source:Uniprot/SWISSPROT;Acc:P61648]
16.9697 -13.35 1.90917e-05 201 10 6 27 [+] picture button
XR_023032.1 ENSPTRT00000032097 PREDICTED: Pan troglodytes similar to diaphanous 1 (LOC462144), mRNA. [Source:RefSeq_dna;Acc:XR_023032]
16.2617 -14.26 2.19043e-05 922 19 6 28 [+] picture button
EFEMP1 ENSPTRT00000022229 EGF-containing fibulin-like extracellular matrix protein 1 precursor (Fibulin-3) (FIBL-3) (Fibrillin-like protein) (Extracellular protein S1-5). [Source:Uniprot/SWISSPROT;Acc:Q12805]
17.0147 -17.22 3.87143e-05 469 19 10 38 [+] picture button
XR_022143.1 ENSPTRT00000019430 PREDICTED: Pan troglodytes similar to Mitogen-activated protein kinase organizer 1 (LOC747166), mRNA. [Source:RefSeq_dna;Acc:XR_022143]
16.7435 -13.82 3.95348e-05 154 7 6 20 [+] picture button
LCMT1 ENSPTRT00000060322 Leucine carboxyl methyltransferase 1 (EC 2.1.1.-) (Protein-leucine O- methyltransferase). [Source:Uniprot/SWISSPROT;Acc:Q9UIC8]
16.1778 -18.18 4.1037e-05 208 11 5 31 [+] picture button
FGF10 ENSPTRT00000031268 Fibroblast growth factor 10 precursor (FGF-10) (Keratinocyte growth factor 2). [Source:Uniprot/SWISSPROT;Acc:O15520]
16.9835 -17.3 4.35599e-05 1000 17 11 26 [+] picture button
RPAP1 ENSPTRT00000012806 RNA polymerase II-associated protein 1. [Source:Uniprot/SWISSPROT;Acc:Q9BWH6]
16.833 -17.7 4.40533e-05 363 19 6 45 [+] picture button
CALB2 ENSPTRT00000015347 Calretinin (CR) (29 kDa calbindin). [Source:Uniprot/SWISSPROT;Acc:P22676]
15.9311 -12.93 4.72945e-05 1000 13 6 19 [+] picture button
XR_020581.1 ENSPTRT00000014604 PREDICTED: Pan troglodytes similar to RANBP20 (LOC741597), mRNA. [Source:RefSeq_dna;Acc:XR_020581]
16.4324 -21.68 6.12557e-05 543 20 6 55 [+] picture button
GRB14 ENSPTRT00000023319 Growth factor receptor-bound protein 14 (GRB14 adapter protein). [Source:Uniprot/SWISSPROT;Acc:Q14449]
15.8384 -13.3 6.20973e-05 212 11 5 21 [+] picture button
GPR151 ENSPTRT00000032146 Probable G-protein coupled receptor 151 (G-protein coupled receptor PGR7) (GPCR-2037). [Source:Uniprot/SWISSPROT;Acc:Q8TDV0]
16.4289 -12.29 8.53959e-05 1000 12 4 17 [+] picture button
KLHL1 ENSPTRT00000010872 Kelch-like protein 1. [Source:Uniprot/SWISSPROT;Acc:Q9NR64]
16.3953 -20.6 9.51195e-05 1085 11 8 13 [+] picture button
TNFSF5IP1 ENSPTRT00000018152 tumor necrosis factor superfamily, member 5-induced protein 1 [Source:RefSeq_peptide;Acc:NP_064617]
16.6303 -13.11 0.000101607 210 10 5 31 [+] picture button
ALS2CR7 ENSPTRT00000023759 Serine/threonine-protein kinase ALS2CR7 (EC 2.7.11.22) (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 7 protein) (Serine/threonine-protein kinase PFTAIRE-2). [Source:Uniprot/SWISSPROT;Acc:Q96Q40]
17.8748 -17.24 0.000102648 276 12 5 39 [+] picture button
BICC1 ENSPTRT00000004710 Protein bicaudal C homolog 1 (Bic-C). [Source:Uniprot/SWISSPROT;Acc:Q9H694]
18.101 -13.42 0.000134787 194 12 5 44 [+] picture button
SNAI3 ENSPTRT00000015587 snail homolog 3 [Source:RefSeq_peptide;Acc:NP_840101]
16.1523 -15.56 0.000142919 770 21 7 37 [+] picture button
OGDHL ENSPTRT00000004658 oxoglutarate dehydrogenase-like [Source:RefSeq_peptide;Acc:NP_060715]
16.5684 -18.15 0.000152471 567 25 7 51 [+] picture button
EVI5L ENSPTRT00000019126 EVI5-like protein (Ecotropic viral integration site 5-like protein). [Source:Uniprot/SWISSPROT;Acc:Q96CN4]
16.2011 -20.74 0.00015645 1000 19 6 24 [+] picture button
LDLR ENSPTRT00000019326 Low-density lipoprotein receptor precursor (LDL receptor). [Source:Uniprot/SWISSPROT;Acc:P01130]
16.6059 -17.55 0.000185608 846 15 4 18 [+] picture button
XR_023067.1 ENSPTRT00000023428 PREDICTED: Pan troglodytes similar to MLTK alpha (LOC459745), mRNA. [Source:RefSeq_dna;Acc:XR_023067]
16.003 -14.34 0.000186311 1000 14 7 18 [+] picture button
KIRREL2 ENSPTRT00000042894 Kin of IRRE-like protein 2 precursor (Kin of irregular chiasm-like protein 2) (Nephrin-like protein 3). [Source:Uniprot/SWISSPROT;Acc:Q6UWL6]
16.2708 -20.49 0.000186996 1000 14 6 19 [+] picture button
NP_612420.1 ENSPTRT00000021100 PREDICTED: Bos taurus hypothetical protein LOC617892 (LOC617892), misc RNA. [Source:RefSeq_dna;Acc:XR_028075]PREDICTED: Bos taurus hypothetical protein LOC617892 (LOC617892), misc RNA. [Source:RefSeq_dna;Acc:XR_028075] BY ORTHOLOGY TO:ENSBTAT00000026757
16.6303 -15.17 0.000188213 172 9 5 25 [+] picture button
HOXD1 ENSPTRT00000023475 Homeobox protein Hox-D1. [Source:Uniprot/SWISSPROT;Acc:Q9GZZ0]
16.8155 -24.56 0.000190473 766 16 6 29 [+] picture button
ZFP36 ENSPTRT00000020326 Tristetraproline (TTP) (Zinc finger protein 36 homolog) (Zfp-36) (TIS11A protein) (TIS11) (Growth factor-inducible nuclear protein NUP475) (G0/G1 switch regulatory protein 24). [Source:Uniprot/SWISSPROT;Acc:P26651]
15.8843 -16.72 0.000205971 706 20 6 34 [+] picture button
CDX2 ENSPTRT00000010562 Homeobox protein CDX-2 (Caudal-type homeobox protein 2) (CDX-3). [Source:Uniprot/SWISSPROT;Acc:Q99626]
16.5285 -24.79 0.000227848 1000 17 6 25 [+] picture button
LIM2 ENSPTRT00000021175 lens intrinsic membrane protein 2, 19kDa [Source:RefSeq_peptide;Acc:NP_085915]
16.1778 -11.47 0.000303927 170 8 7 39 [+] picture button
XR_020565.1 ENSPTRT00000019067 PREDICTED: Pan troglodytes G protein-coupled receptor 108 (GPR108), mRNA. [Source:RefSeq_dna;Acc:XR_020565]
15.8957 -13.74 0.000306122 398 16 5 54 [+] picture button
PITRM1 ENSPTRT00000004107 Presequence protease, mitochondrial precursor (EC 3.4.24.-) (hPreP) (Pitrilysin metalloproteinase 1) (Metalloprotease 1) (hMP1). [Source:Uniprot/SWISSPROT;Acc:Q5JRX3]
17.0259 -17.55 0.000339508 309 14 5 38 [+] picture button
PIGF ENSPTRT00000022130 Phosphatidylinositol-glycan biosynthesis class F protein (PIG-F) (GPI11 homolog). [Source:Uniprot/SWISSPROT;Acc:Q07326]
15.8384 -13.27 0.000341805 203 13 9 43 [+] picture button
DOCK9 ENSPTRT00000042897 Dedicator of cytokinesis protein 9 (Cdc42 guanine nucleotide exchange factor zizimin-1). [Source:Uniprot/SWISSPROT;Acc:Q9BZ29]
16.9661 -20.94 0.000342543 1000 20 5 28 [+] picture button
EMB ENSPTRT00000031271 Embigin precursor. [Source:Uniprot/SWISSPROT;Acc:Q6PCB8]
16.9421 -15.65 0.000350733 627 14 5 21 [+] picture button
ITPKC ENSPTRT00000020423 Inositol-trisphosphate 3-kinase C (EC 2.7.1.127) (Inositol 1,4,5- trisphosphate 3-kinase C) (InsP 3-kinase C) (IP3K-C). [Source:Uniprot/SWISSPROT;Acc:Q96DU7]
16.1089 -22.7 0.000399386 1299 12 3 15 [+] picture button

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Download table: GFF TXT
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