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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Pan troglodytes and ptr-miR-30c

243 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Q6J9M5_PANTR ENSPTRT00000012595 Makorin ring finger protein 3 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6J9M5]
16.4175 -17.01 6.10598e-09 1108 15 6 16 [+] picture button
XR_025607.1 ENSPTRT00000032192 PREDICTED: Pan troglodytes PGC-1-related estrogen receptor alpha coactivator (PPARGC1B), mRNA. [Source:RefSeq_dna;Acc:XR_025607]
16.6303 -10.75 6.86984e-09 146 8 14 15 [+] picture button
ASB3 ENSPTRT00000022178 Ankyrin repeat and SOCS box protein 3 (ASB-3). [Source:Uniprot/SWISSPROT;Acc:Q9Y575]
19.1192 -19.78 1.00099e-07 184 11 5 36 [+] picture button
HERC2 ENSPTRT00000012625 Probable E3 ubiquitin-protein ligase HERC2 (EC 6.3.2.-) (HECT domain and RCC1-like domain-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:O95714]
16.6802 -15.92 1.62646e-07 480 21 9 51 [+] picture button
CUL2 ENSPTRT00000004474 Cullin-2 (CUL-2). [Source:Uniprot/SWISSPROT;Acc:Q13617]
16.1463 -9.66 2.16726e-07 430 18 16 39 [+] picture button
PDSS1 ENSPTRT00000004356 Decaprenyl-diphosphate synthase subunit 1 (EC 2.5.1.-) (Decaprenyl pyrophosphate synthetase subunit 1) (Trans-prenyltransferase) (TPT). [Source:Uniprot/SWISSPROT;Acc:Q5T2R2]
15.6978 -14.21 2.3765e-07 1000 15 8 23 [+] picture button
FAP ENSPTRT00000023310 Seprase (EC 3.4.21.-) (Fibroblast activation protein alpha) (Integral membrane serine protease) (170 kDa melanoma membrane-bound gelatinase). [Source:Uniprot/SWISSPROT;Acc:Q12884]
16.9697 -7.74 5.44621e-07 285 15 8 54 [+] picture button
NKX2-2 ENSPTRT00000024735 Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B). [Source:Uniprot/SWISSPROT;Acc:O95096]
16.2459 -14.03 8.6377e-07 908 18 11 28 [+] picture button
AP3S1 ENSPTRT00000031765 AP-3 complex subunit sigma-1 (Adapter-related protein complex 3 sigma- 1 subunit) (Sigma-adaptin 3a) (AP-3 complex sigma-3A subunit) (Sigma- 3A-adaptin) (Clathrin-associated/assembly/adapter protein, small 3). [Source:Uniprot/SWISSPROT;Acc:Q92572]
15.7592 -7.77 1.10898e-06 503 19 10 43 [+] picture button
SNRPD1 ENSPTRT00000018197 Small nuclear ribonucleoprotein Sm D1 (snRNP core protein D1) (Sm-D1) (Sm-D autoantigen). [Source:Uniprot/SWISSPROT;Acc:P62314]
15.3713 -16.14 1.22038e-06 1240 17 8 19 [+] picture button
SLC7A10 ENSPTRT00000019999 Asc-type amino acid transporter 1 (Asc-1). [Source:Uniprot/SWISSPROT;Acc:Q9NS82]
16.4041 -12.52 1.95638e-06 228 10 7 42 [+] picture button
POLR3E ENSPTRT00000014513 DNA-directed RNA polymerases III 80 kDa polypeptide (EC 2.7.7.6) (RNA polymerase III subunit 5) (RPC5). [Source:Uniprot/SWISSPROT;Acc:Q9NVU0]
15.5453 -11.12 2.53444e-06 1000 14 7 14 [+] picture button
MYCBP2 ENSPTRT00000043801 Probable E3 ubiquitin-protein ligase MYCBP2 (EC 6.3.2.-) (Myc-binding protein 2) (Protein associated with Myc) (Pam/highwire/rpm-1 protein). [Source:Uniprot/SWISSPROT;Acc:O75592]
15.8866 -17.01 2.6045e-06 719 19 8 28 [+] picture button
REV1 ENSPTRT00000022803 DNA repair protein REV1 (EC 2.7.7.-) (Rev1-like terminal deoxycytidyl transferase) (Alpha integrin-binding protein 80) (AIBP80). [Source:Uniprot/SWISSPROT;Acc:Q9UBZ9]
16.4612 -13.44 4.84452e-06 769 18 8 30 [+] picture button
RFX2 ENSPTRT00000019030 DNA-binding protein RFX2. [Source:Uniprot/SWISSPROT;Acc:P48378]
15.832 -16.2 5.46396e-06 1671 6 5 7 [+] picture button
TAF7 ENSPTRT00000032086 Transcription initiation factor TFIID subunit 7 (Transcription initiation factor TFIID 55 kDa subunit) (TAF(II)55) (TAFII-55) (TAFII55). [Source:Uniprot/SWISSPROT;Acc:Q15545]
15.5328 -19.77 5.96306e-06 1000 18 5 25 [+] picture button
PARP16 ENSPTRT00000013236 Poly [ADP-ribose] polymerase 16 (EC 2.4.2.30) (PARP-16). [Source:Uniprot/SWISSPROT;Acc:Q8N5Y8]
16.1101 -21.01 6.30064e-06 1307 10 7 12 [+] picture button
SEC23B ENSPTRT00000024700 Protein transport protein Sec23B (SEC23-related protein B). [Source:Uniprot/SWISSPROT;Acc:Q15437]
15.464 -14.31 8.94841e-06 665 14 6 24 [+] picture button
GABRB1 ENSPTRT00000029887 Gamma-aminobutyric-acid receptor subunit beta-1 precursor (GABA(A) receptor subunit beta-1). [Source:Uniprot/SWISSPROT;Acc:P18505]
16.8197 -8.09 9.07636e-06 410 15 4 32 [+] picture button
GALNT3 ENSPTRT00000023329 Polypeptide N-acetylgalactosaminyltransferase 3 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 3) (UDP- GalNAc:polypeptide N-acetylgalactosaminyltransferase 3) (Polypeptide GalNAc transferase 3) (GalNAc-T3) (pp-GaNTase 3). [Source:Uniprot/SWISSPROT;Acc:Q14435]
15.8371 -17.98 9.11815e-06 1846 11 8 13 [+] picture button
EDNRB ENSPTRT00000010920 Endothelin B receptor precursor (ET-B) (Endothelin receptor Non- selective type). [Source:Uniprot/SWISSPROT;Acc:P24530]
15.7945 -9.82 1.091e-05 1000 12 7 19 [+] picture button
RRAD ENSPTRT00000015133 GTP-binding protein RAD (RAS associated with diabetes) (RAD1). [Source:Uniprot/SWISSPROT;Acc:P55042]
15.9402 -13.7 1.35634e-05 388 19 7 49 [+] picture button
MAL ENSPTRT00000022674 Myelin and lymphocyte protein (T-lymphocyte maturation-associated protein). [Source:Uniprot/SWISSPROT;Acc:P21145]
16.4083 -16.3 1.64391e-05 539 20 5 31 [+] picture button
ENSPTRT00000012955 PREDICTED: similar to RIKEN cDNA 4930424G05 [Source:RefSeq_peptide_predicted;Acc:XP_113825] [from human gene ENSG00000184710]PREDICTED: similar to RIKEN cDNA 4930424G05 [Source:RefSeq_peptide_predicted;Acc:XP_113825] [from human gene ENSG00000184710] BY ORTHOLOGY TO:ENSXETT00000030950
17.7616 -16.19 1.64583e-05 261 13 8 45 [+] picture button
TUBGCP5 ENSPTRT00000012583 Gamma-tubulin complex component 5 (GCP-5). [Source:Uniprot/SWISSPROT;Acc:Q96RT8]
16.6665 -16.17 1.71595e-05 642 21 6 36 [+] picture button
RKHD3 ENSPTRT00000013593 RNA-binding protein MEX3B (RING finger and KH domain-containing protein 3) (RING finger protein 195). [Source:Uniprot/SWISSPROT;Acc:Q6ZN04]
15.4447 -12.99 1.90952e-05 1372 12 9 15 [+] picture button
XR_023925.1 ENSPTRT00000014469 PREDICTED: Pan troglodytes hypothetical protein LOC471766 (LOC471766), mRNA. [Source:RefSeq_dna;Acc:XR_023925]
15.8706 -23.63 2.43936e-05 1794 7 8 7 [+] picture button
ARL6IP6 ENSPTRT00000023253 ADP-ribosylation-like factor 6 interacting protein 6 [Source:RefSeq_peptide;Acc:NP_689735]
17.8017 -17.21 2.48198e-05 1343 8 7 9 [+] picture button
TANK ENSPTRT00000023303 TRAF family member-associated NF-kappa-B activator (TRAF-interacting protein) (I-TRAF). [Source:Uniprot/SWISSPROT;Acc:Q92844]
15.8909 -11.6 2.54933e-05 655 17 6 22 [+] picture button
ORC2L ENSPTRT00000023708 Origin recognition complex subunit 2. [Source:Uniprot/SWISSPROT;Acc:Q13416]
17.1183 -21.44 2.62436e-05 1129 16 8 17 [+] picture button
IL21R ENSPTRT00000014595 Interleukin-21 receptor precursor (IL-21R) (Novel interleukin receptor). [Source:Uniprot/SWISSPROT;Acc:Q9HBE5]
15.2349 -16.73 3.76544e-05 1306 22 8 27 [+] picture button
NEUROD1 ENSPTRT00000023551 Neurogenic differentiation factor 1 (NeuroD1) (NeuroD). [Source:Uniprot/SWISSPROT;Acc:Q13562]
16.0895 -14.59 3.90476e-05 1302 16 9 17 [+] picture button
HIRIP3 ENSPTRT00000014722 HIRA-interacting protein 3. [Source:Uniprot/SWISSPROT;Acc:Q9BW71]
17.196 -13.29 4.55761e-05 211 12 5 48 [+] picture button
XR_022777.1 ENSPTRT00000024587 PREDICTED: Pan troglodytes similar to RP5-1022P6.2 (LOC472377), mRNA. [Source:RefSeq_dna;Acc:XR_022777]
15.3441 -17.9 4.70866e-05 3224 2 7 2 [+] picture button
PAX3 ENSPTRT00000024032 Paired box protein Pax-3 (HUP2). [Source:Uniprot/SWISSPROT;Acc:P23760]
16.2825 -22.04 4.8707e-05 1000 17 5 27 [+] picture button
SPC25 ENSPTRT00000023353 Kinetochore protein Spc25 (hSpc25). [Source:Uniprot/SWISSPROT;Acc:Q9HBM1]
15.3748 -14.33 5.41977e-05 538 23 3 55 [+] picture button
WDR70 ENSPTRT00000031199 WD repeat domain 70 [Source:RefSeq_peptide;Acc:NP_060504]
15.9515 -15.45 6.50439e-05 100 3 5 15 [+] picture button
PITRM1 ENSPTRT00000004107 Presequence protease, mitochondrial precursor (EC 3.4.24.-) (hPreP) (Pitrilysin metalloproteinase 1) (Metalloprotease 1) (hMP1). [Source:Uniprot/SWISSPROT;Acc:Q5JRX3]
15.2218 -8.8 6.51271e-05 309 14 5 38 [+] picture button
DNTT ENSPTRT00000005281 DNA nucleotidylexotransferase (EC 2.7.7.31) (Terminal addition enzyme) (Terminal deoxynucleotidyltransferase) (Terminal transferase). [Source:Uniprot/SWISSPROT;Acc:P04053]
15.5044 -9.54 7.19368e-05 319 17 6 62 [+] picture button
XR_021628.1 ENSPTRT00000046282 PREDICTED: Pan troglodytes hypothetical protein LOC742599 (LOC742599), mRNA. [Source:RefSeq_dna;Acc:XR_021628]
15.2334 -12.69 7.37876e-05 1592 6 4 10 [+] picture button
JMJD1A ENSPTRT00000045387 JmjC domain-containing histone demethylation protein 2A (EC 1.14.11.-) (Jumonji domain-containing protein 1A). [Source:Uniprot/SWISSPROT;Acc:Q9Y4C1]
15.4292 -9.34 7.62621e-05 597 18 10 38 [+] picture button
LYSMD2 ENSPTRT00000013059 LysM and putative peptidoglycan-binding domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q8IV50]
16.6476 -15.33 7.73297e-05 542 16 7 38 [+] picture button
EPC2 ENSPTRT00000023218 Enhancer of polycomb homolog 2. [Source:Uniprot/SWISSPROT;Acc:Q52LR7]
15.2188 -9.26 8.26598e-05 1190 18 9 23 [+] picture button
C19orf50 ENSPTRT00000019757 Uncharacterized protein C19orf50 (Fragment). [Source:Uniprot/SPTREMBL;Acc:O76098]
15.9968 -14.26 9.22811e-05 702 18 7 26 [+] picture button
KCTD5 ENSPTRT00000014127 BTB/POZ domain-containing protein KCTD5. [Source:Uniprot/SWISSPROT;Acc:Q9NXV2]
17.6238 -18.53 9.51233e-05 1000 13 5 19 [+] picture button
GDF10 ENSPTRT00000043773 Bone morphogenetic protein 3b precursor (BMP-3b) (Growth/differentiation factor 10) (GDF-10) (Bone-inducing protein) (BIP). [Source:Uniprot/SWISSPROT;Acc:P55107]
16.231 -23.29 9.63255e-05 781 15 5 19 [+] picture button
EXOC6 ENSPTRT00000042620 Exocyst complex component 6 (Exocyst complex component Sec15A) (Sec15- like 1). [Source:Uniprot/SWISSPROT;Acc:Q8TAG9]
15.9239 -11.47 9.91983e-05 1139 5 5 6 [+] picture button
SIGLEC12 ENSPTRT00000061766 Sialic acid-binding Ig-like lectin 12 precursor (Siglec-12) (Sialic acid-binding Ig-like lectin-like 1) (Siglec-L1). [Source:Uniprot/SWISSPROT;Acc:Q96PQ1]
15.3646 -18.01 0.000100293 1000 12 2 12 [+] picture button
PPIL3 ENSPTRT00000046989 Peptidyl-prolyl cis-trans isomerase-like 3 (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin-like protein PPIL3) (Cyclophilin J) (CyPJ). [Source:Uniprot/SWISSPROT;Acc:Q9H2H8]
15.9954 -8.93 0.000104933 439 15 5 37 [+] picture button
PGGT1B ENSPTRT00000031756 Geranylgeranyl transferase type-1 subunit beta (EC 2.5.1.59) (Geranylgeranyl transferase type I subunit beta) (Type I protein geranyl-geranyltransferase subunit beta) (GGTase-I-beta). [Source:Uniprot/SWISSPROT;Acc:P53609]
15.5688 -8.73 0.00010561 522 23 8 45 [+] picture button

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