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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Pan troglodytes and ptr-miR-29b

257 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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PXDN ENSPTRT00000021645 peroxidasin homolog [Source:RefSeq_peptide;Acc:NP_036425]
15.4198 -15.49 4.22318e-10 1019 12 7 14 [+] picture button
COL4A1 ENSPTRT00000011070 Collagen alpha-1(IV) chain precursor (Arresten). [Source:Uniprot/SWISSPROT;Acc:P02462]
18.047 -16.48 9.27711e-09 258 11 7 43 [+] picture button
SESTD1 ENSPTRT00000023538 SEC14 and spectrin domains 1 [Source:RefSeq_peptide;Acc:NP_835224]
16.9457 -15.96 1.52961e-08 1089 16 10 22 [+] picture button
HDAC4 ENSPTRT00000024291 Histone deacetylase 4 (HD4). [Source:Uniprot/SWISSPROT;Acc:P56524]
17.0002 -17.3 1.79166e-08 1000 14 7 18 [+] picture button
LOXL4 ENSPTRT00000005357 Lysyl oxidase homolog 4 precursor (EC 1.4.3.-) (Lysyl oxidase-like protein 4) (Lysyl oxidase-related protein C). [Source:Uniprot/SWISSPROT;Acc:Q96JB6]
15.4221 -15.93 6.76529e-08 1236 13 7 15 [+] picture button
XR_024082.1 ENSPTRT00000024204 PREDICTED: Pan troglodytes similar to diacylglycerol kinase, delta 130kDa (LOC460025), mRNA. [Source:RefSeq_dna;Acc:XR_024082]
16.1472 -16.22 8.2816e-08 1000 21 6 26 [+] picture button
PSL1_HUMAN ENSPTRT00000018796 Signal peptide peptidase-like 2B (EC 3.4.23.-) (Protein SPP-like 2B) (Protein SPPL2b) (Intramembrane protease 4) (IMP4) (Presenilin-like protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8TCT7]
15.5002 -13.2 1.46056e-07 1000 21 3 33 [+] picture button
IREB2 ENSPTRT00000013538 Iron-responsive element-binding protein 2 (IRE-BP 2) (Iron regulatory protein 2) (IRP2). [Source:Uniprot/SWISSPROT;Acc:P48200]
15.4311 -20.13 2.28504e-07 2394 6 9 6 [+] picture button
COL6A3 ENSPTRT00000024248 Collagen alpha-3(VI) chain precursor. [Source:Uniprot/SWISSPROT;Acc:P12111]
16.3663 -17.37 2.47284e-07 749 16 8 26 [+] picture button
ADAMTS10 ENSPTRT00000019171 ADAMTS-10 precursor (EC 3.4.24.-) (A disintegrin and metalloproteinase with thrombospondin motifs 10) (ADAM-TS 10) (ADAM-TS10) (Fragment). [Source:Uniprot/SWISSPROT;Acc:Q9H324]
15.9363 -14.15 6.05049e-07 649 17 4 24 [+] picture button
COL5A3 ENSPTRT00000019214 Collagen alpha-3(V) chain precursor. [Source:Uniprot/SWISSPROT;Acc:P25940]
16.6348 -17.14 1.19676e-06 1000 18 5 22 [+] picture button
PPIC ENSPTRT00000031800 Peptidyl-prolyl cis-trans isomerase C (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin C). [Source:Uniprot/SWISSPROT;Acc:P45877]
15.891 -15.67 1.27201e-06 513 20 7 50 [+] picture button
C20orf159 ENSPTRT00000062143 XK-related protein 7. [Source:Uniprot/SWISSPROT;Acc:Q5GH72]
15.667 -17.44 1.34755e-06 1000 18 9 24 [+] picture button
NP_060229.2 ENSPTRT00000023824 CDNA FLJ20309 fis, clone HEP07296. [Source:Uniprot/SPTREMBL;Acc:Q9NXD5]
15.5546 -10.87 2.64446e-06 723 14 11 23 [+] picture button
COL3A1 ENSPTRT00000023592 Collagen alpha-1(III) chain precursor. [Source:Uniprot/SWISSPROT;Acc:P02461]
15.9579 -16.78 2.85587e-06 971 10 7 11 [+] picture button
DDX4 ENSPTRT00000042815 Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-) (DEAD box protein 4) (VASA homolog). [Source:Uniprot/SWISSPROT;Acc:Q9NQI0]
19.3114 -23.75 3.72039e-06 240 12 7 41 [+] picture button
Q9NW00_HUMAN ENSPTRT00000032520 CDNA FLJ10404 fis, clone NT2RM4000486 (Hypothetical protein DKFZp313I142) (FLJ10404 protein). [Source:Uniprot/SPTREMBL;Acc:Q9NW00]
16.3774 -13.04 4.31956e-06 393 17 9 53 [+] picture button
CCNE1 ENSPTRT00000019964 G1/S-specific cyclin-E1. [Source:Uniprot/SWISSPROT;Acc:P24864]
15.8762 -16.06 4.98518e-06 533 18 9 38 [+] picture button
DNMT3A ENSPTRT00000042935 DNA (cytosine-5)-methyltransferase 3A (EC 2.1.1.37) (Dnmt3a) (DNA methyltransferase HsaIIIA) (DNA MTase HsaIIIA) (M.HsaIIIA). [Source:Uniprot/SWISSPROT;Acc:Q9Y6K1]
16.6899 -17.8 5.53381e-06 1304 12 4 12 [+] picture button
A2T782_PANTR ENSPTRT00000010647 RFXAP (Fragment). [Source:Uniprot/SPTREMBL;Acc:A2T782]
15.752 -15.84 6.51512e-06 1000 21 6 29 [+] picture button
PARG ENSPTRT00000060448 Poly(ADP-ribose) glycohydrolase (EC 3.2.1.143). [Source:Uniprot/SWISSPROT;Acc:Q86W56]
15.3021 -15.78 6.88897e-06 945 18 6 24 [+] picture button
ITGA11 ENSPTRT00000013324 Integrin alpha-11 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9UKX5]
17.0124 -16.91 1.30508e-05 233 15 5 52 [+] picture button
ZNF366 ENSPTRT00000031472 Zinc finger protein 366. [Source:Uniprot/SWISSPROT;Acc:Q8N895]
15.227 -15.04 1.77797e-05 1082 10 5 14 [+] picture button
STRN4 ENSPTRT00000020799 Striatin-4 (Zinedin). [Source:Uniprot/SWISSPROT;Acc:Q9NRL3]
15.8 -16.63 2.047e-05 855 15 7 17 [+] picture button
SNX24 ENSPTRT00000031799 Sorting nexin-24. [Source:Uniprot/SWISSPROT;Acc:Q9Y343]
15.4869 -13.61 2.1347e-05 1461 12 6 12 [+] picture button
CAMK1D ENSPTRT00000004207 Calcium/calmodulin-dependent protein kinase type 1D (EC 2.7.11.17) (CaM kinase ID) (CaM kinase I delta) (CaMKI-delta) (CaM-KI delta) (CaMKI delta) (Camk1D) (CamKI-like protein kinase) (CKLiK). [Source:Uniprot/SWISSPROT;Acc:Q8IU85]
16.0978 -24.08 2.39036e-05 1000 18 7 31 [+] picture button
PSMD7 ENSPTRT00000015384 26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Mov34 protein homolog). [Source:Uniprot/SWISSPROT;Acc:P51665]
15.895 -14.31 2.68372e-05 553 20 7 39 [+] picture button
XR_019731.1 ENSPTRT00000021434 PREDICTED: Pan troglodytes suppressor of variegation 4-20 homolog 2 (SUV420H2), mRNA. [Source:RefSeq_dna;Acc:XR_019731]
17.255 -17.12 2.74835e-05 671 21 8 42 [+] picture button
H2AFY ENSPTRT00000031944 Core histone macro-H2A.1 (Histone macroH2A1) (mH2A1) (H2A.y) (H2A/y) (Medulloblastoma antigen MU-MB-50.205). [Source:Uniprot/SWISSPROT;Acc:O75367]
15.1814 -12.22 3.0946e-05 592 13 7 25 [+] picture button
H2AFY2 ENSPTRT00000004853 Core histone macro-H2A.2 (Histone macroH2A2) (mH2A2). [Source:Uniprot/SWISSPROT;Acc:Q9P0M6]
15.8186 -12.07 3.51496e-05 601 21 7 34 [+] picture button
PHYHIPL ENSPTRT00000004711 phytanoyl-CoA hydroxylase interacting protein-like [Source:RefSeq_peptide;Acc:NP_115815]
15.1572 -15.99 3.52567e-05 1691 7 7 8 [+] picture button
ZNF346 ENSPTRT00000032481 Zinc finger protein 346 (Just another zinc finger protein). [Source:Uniprot/SWISSPROT;Acc:Q9UL40]
16.4575 -20.19 3.5754e-05 2131 12 2 13 [+] picture button
XR_020644.1 ENSPTRT00000015539 PREDICTED: Pan troglodytes hypothetical protein LOC737459 (LOC737459), mRNA. [Source:RefSeq_dna;Acc:XR_020644]
15.7425 -20.17 3.8942e-05 543 17 4 34 [+] picture button
XR_022748.1 ENSPTRT00000025444 PREDICTED: Pan troglodytes similar to AP-2 gamma (LOC470954), mRNA. [Source:RefSeq_dna;Acc:XR_022748]
15.5435 -20.04 4.60197e-05 1258 17 5 21 [+] picture button
POLR1D ENSPTRT00000060269 DNA-directed RNA polymerase I subunit D (EC 2.7.7.6) (DNA-directed RNA polymerase I 16 kDa polypeptide) (RPA16). [Source:Uniprot/SWISSPROT;Acc:Q9Y2S0]
15.6331 -11.2 5.40314e-05 146 8 5 38 [+] picture button
CNOT8 ENSPTRT00000032266 CCR4-NOT transcription complex subunit 8 (CCR4-associated factor 8) (CAF1-like protein) (CALIFp) (CAF2). [Source:Uniprot/SWISSPROT;Acc:Q9UFF9]
16.0693 -21.2 5.82723e-05 1353 10 6 10 [+] picture button
NDUS6_PANTR ENSPTRT00000062362 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 13 kDa-A subunit) (Complex I-13kD-A) (CI-13kD-A). [Source:Uniprot/SWISSPROT;Acc:Q0MQH7]
16.3227 -14.98 6.15041e-05 131 7 5 40 [+] picture button
BMPR1A ENSPTRT00000005116 Bone morphogenetic protein receptor type IA precursor (EC 2.7.11.30) (Serine/threonine-protein kinase receptor R5) (SKR5) (Activin receptor-like kinase 3) (ALK-3) (CD292 antigen). [Source:Uniprot/SWISSPROT;Acc:P36894]
15.5145 -18.45 7.3047e-05 1466 16 6 22 [+] picture button
K0401_HUMAN ENSPTRT00000022461 Uncharacterized protein KIAA0401. [Source:Uniprot/SWISSPROT;Acc:O43151]
16.2436 -17.28 8.85204e-05 392 17 6 43 [+] picture button
C10orf54 ENSPTRT00000043609 Platelet receptor Gi24 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9H7M9]
16.177 -20.85 9.3071e-05 928 19 5 26 [+] picture button
ICOS ENSPTRT00000023807 Inducible T-cell co-stimulator precursor (Activation-inducible lymphocyte immunomediatory molecule) (CD278 antigen). [Source:Uniprot/SWISSPROT;Acc:Q9Y6W8]
15.168 -17.22 9.63746e-05 1972 5 3 8 [+] picture button
ZNF438 ENSPTRT00000004414 Zinc finger protein 438. [Source:Uniprot/SWISSPROT;Acc:Q7Z4V0]
18.3918 -14.69 9.6668e-05 179 10 5 30 [+] picture button
ADA ENSPTRT00000025174 Adenosine deaminase (EC 3.5.4.4) (Adenosine aminohydrolase). [Source:Uniprot/SWISSPROT;Acc:P00813]
16.1529 -14.6 0.000138627 309 18 6 50 [+] picture button
IL1F5 ENSPTRT00000022976 Interleukin-1 family member 5 (IL-1F5) (Interleukin-1 delta) (IL-1 delta) (FIL1 delta) (Interleukin-1-like protein 1) (IL-1L1) (Interleukin-1 HY1) (IL-1HY1) (Interleukin-1 receptor antagonist homolog 1) (IL-1ra homolog 1) (IL-1-related protein 3) (IL-1RP3 [Source:Uniprot/SWISSPROT;Acc:Q9UBH0]
16.9672 -17.96 0.000142192 1000 17 3 37 [+] picture button
CSE1L ENSPTRT00000025339 Exportin-2 (Exp2) (Importin-alpha re-exporter) (Chromosome segregation 1-like protein) (Cellular apoptosis susceptibility protein). [Source:Uniprot/SWISSPROT;Acc:P55060]
15.3876 -13.54 0.000155184 509 21 7 48 [+] picture button
SLC30A3 ENSPTRT00000021898 Zinc transporter 3 (ZnT-3) (Solute carrier family 30 member 3). [Source:Uniprot/SWISSPROT;Acc:Q99726]
15.5691 -14.02 0.000161559 705 24 7 42 [+] picture button
IRX1 ENSPTRT00000031041 Iroquois-class homeodomain protein IRX-1 (Iroquois homeobox protein 1) (Homeodomain protein IRXA1). [Source:Uniprot/SWISSPROT;Acc:P78414]
15.1278 -14.67 0.00016831 363 18 8 42 [+] picture button
HMGCR ENSPTRT00000031507 3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC 1.1.1.34) (HMG-CoA reductase). [Source:Uniprot/SWISSPROT;Acc:P04035]
15.1048 -16.66 0.000173659 1761 4 5 3 [+] picture button
IDH2 ENSPTRT00000013734 Isocitrate dehydrogenase [NADP], mitochondrial precursor (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M). [Source:Uniprot/SWISSPROT;Acc:P48735]
15.1733 -14.09 0.000190249 282 17 8 74 [+] picture button
ISL1 ENSPTRT00000031273 Insulin gene enhancer protein ISL-1 (Islet-1). [Source:Uniprot/SWISSPROT;Acc:P61371]
16.6953 -17.07 0.000197721 822 13 12 25 [+] picture button

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