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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Pan troglodytes and ptr-miR-29a

258 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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COL4A1 ENSPTRT00000011070 Collagen alpha-1(IV) chain precursor (Arresten). [Source:Uniprot/SWISSPROT;Acc:P02462]
17.9651 -16.18 9.27711e-09 258 11 7 43 [+] picture button
SESTD1 ENSPTRT00000023538 SEC14 and spectrin domains 1 [Source:RefSeq_peptide;Acc:NP_835224]
16.4874 -14.11 1.52961e-08 1089 16 10 22 [+] picture button
HAS3 ENSPTRT00000015254 Hyaluronan synthase 3 (EC 2.4.1.212) (Hyaluronate synthase 3) (Hyaluronic acid synthase 3) (HA synthase 3). [Source:Uniprot/SWISSPROT;Acc:O00219]
15.0316 -19.83 7.19999e-08 2397 7 4 8 [+] picture button
XR_024082.1 ENSPTRT00000024204 PREDICTED: Pan troglodytes similar to diacylglycerol kinase, delta 130kDa (LOC460025), mRNA. [Source:RefSeq_dna;Acc:XR_024082]
16.2941 -18.1 8.2816e-08 1000 21 6 26 [+] picture button
IFI30 ENSPTRT00000019724 Gamma-interferon-inducible lysosomal thiol reductase precursor (Gamma- interferon-inducible protein IP-30). [Source:Uniprot/SWISSPROT;Acc:P13284]
16.6007 -13.18 9.04478e-08 206 8 6 27 [+] picture button
COL6A3 ENSPTRT00000024248 Collagen alpha-3(VI) chain precursor. [Source:Uniprot/SWISSPROT;Acc:P12111]
16.515 -21.59 2.47284e-07 749 16 8 26 [+] picture button
ADAMTS10 ENSPTRT00000019171 ADAMTS-10 precursor (EC 3.4.24.-) (A disintegrin and metalloproteinase with thrombospondin motifs 10) (ADAM-TS 10) (ADAM-TS10) (Fragment). [Source:Uniprot/SWISSPROT;Acc:Q9H324]
15.7766 -15.3 6.05049e-07 649 17 4 24 [+] picture button
XR_024296.1 ENSPTRT00000058977 PREDICTED: Pan troglodytes similar to vitrin (LOC459150), mRNA. [Source:RefSeq_dna;Acc:XR_024296]
15.5308 -16.68 1.03656e-06 425 19 5 46 [+] picture button
COL5A3 ENSPTRT00000019214 Collagen alpha-3(V) chain precursor. [Source:Uniprot/SWISSPROT;Acc:P25940]
15.4567 -17.33 1.19676e-06 1000 18 5 22 [+] picture button
C20orf159 ENSPTRT00000062143 XK-related protein 7. [Source:Uniprot/SWISSPROT;Acc:Q5GH72]
15.5175 -17.45 1.34755e-06 1000 18 9 24 [+] picture button
COL3A1 ENSPTRT00000023592 Collagen alpha-1(III) chain precursor. [Source:Uniprot/SWISSPROT;Acc:P02461]
15.9054 -15.81 2.85587e-06 971 10 7 11 [+] picture button
DDX4 ENSPTRT00000042815 Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-) (DEAD box protein 4) (VASA homolog). [Source:Uniprot/SWISSPROT;Acc:Q9NQI0]
17.8514 -19.05 3.72039e-06 240 12 7 41 [+] picture button
Q9NW00_HUMAN ENSPTRT00000032520 CDNA FLJ10404 fis, clone NT2RM4000486 (Hypothetical protein DKFZp313I142) (FLJ10404 protein). [Source:Uniprot/SPTREMBL;Acc:Q9NW00]
17.2087 -17.95 4.31956e-06 393 17 9 53 [+] picture button
CCNE1 ENSPTRT00000019964 G1/S-specific cyclin-E1. [Source:Uniprot/SWISSPROT;Acc:P24864]
16.5697 -14.46 4.98518e-06 533 18 9 38 [+] picture button
DNMT3A ENSPTRT00000042935 DNA (cytosine-5)-methyltransferase 3A (EC 2.1.1.37) (Dnmt3a) (DNA methyltransferase HsaIIIA) (DNA MTase HsaIIIA) (M.HsaIIIA). [Source:Uniprot/SWISSPROT;Acc:Q9Y6K1]
15.2455 -22.86 5.53381e-06 1304 12 4 12 [+] picture button
A2T782_PANTR ENSPTRT00000010647 RFXAP (Fragment). [Source:Uniprot/SPTREMBL;Acc:A2T782]
15.8019 -14.76 6.51512e-06 1000 21 6 29 [+] picture button
EN1 ENSPTRT00000056473 Homeobox protein engrailed-1 (Hu-En-1). [Source:Uniprot/SWISSPROT;Acc:Q05925]
14.8768 -15.08 6.73524e-06 1000 24 7 29 [+] picture button
ITGA11 ENSPTRT00000013324 Integrin alpha-11 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9UKX5]
16.487 -21.73 1.30508e-05 233 15 5 52 [+] picture button
STRN4 ENSPTRT00000020799 Striatin-4 (Zinedin). [Source:Uniprot/SWISSPROT;Acc:Q9NRL3]
15.647 -20 2.047e-05 855 15 7 17 [+] picture button
CAMK1D ENSPTRT00000004207 Calcium/calmodulin-dependent protein kinase type 1D (EC 2.7.11.17) (CaM kinase ID) (CaM kinase I delta) (CaMKI-delta) (CaM-KI delta) (CaMKI delta) (Camk1D) (CamKI-like protein kinase) (CKLiK). [Source:Uniprot/SWISSPROT;Acc:Q8IU85]
14.8409 -23.08 2.39036e-05 1000 18 7 31 [+] picture button
DDX49 ENSPTRT00000019780 Probable ATP-dependent RNA helicase DDX49 (EC 3.6.1.-) (DEAD box protein 49). [Source:Uniprot/SWISSPROT;Acc:Q9Y6V7]
15.0609 -17.16 2.53359e-05 311 15 4 47 [+] picture button
PSMD7 ENSPTRT00000015384 26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Mov34 protein homolog). [Source:Uniprot/SWISSPROT;Acc:P51665]
15.734 -13.43 2.68372e-05 553 20 7 39 [+] picture button
XR_019731.1 ENSPTRT00000021434 PREDICTED: Pan troglodytes suppressor of variegation 4-20 homolog 2 (SUV420H2), mRNA. [Source:RefSeq_dna;Acc:XR_019731]
17.0837 -16.48 2.74835e-05 671 21 8 42 [+] picture button
SCNN1G ENSPTRT00000014525 Amiloride-sensitive sodium channel subunit gamma (Epithelial Na(+) channel subunit gamma) (Gamma ENaC) (Nonvoltage-gated sodium channel 1 subunit gamma) (SCNEG) (Gamma NaCH). [Source:Uniprot/SWISSPROT;Acc:P51170]
15.0018 -30.24 2.89101e-05 1000 21 4 31 [+] picture button
ZNF346 ENSPTRT00000032481 Zinc finger protein 346 (Just another zinc finger protein). [Source:Uniprot/SWISSPROT;Acc:Q9UL40]
15.5656 -18.69 3.5754e-05 2131 12 2 13 [+] picture button
SFRS7 ENSPTRT00000022057 Splicing factor, arginine/serine-rich 7 (Splicing factor 9G8). [Source:Uniprot/SWISSPROT;Acc:Q16629]
16.1267 -28.07 3.61578e-05 1539 7 6 9 [+] picture button
KRTCAP3 ENSPTRT00000021914 Keratinocytes-associated protein 3 (KCP-3). [Source:Uniprot/SWISSPROT;Acc:Q53RY4]
15.0088 -12.67 5.86353e-05 115 6 5 21 [+] picture button
NDUS6_PANTR ENSPTRT00000062362 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 13 kDa-A subunit) (Complex I-13kD-A) (CI-13kD-A). [Source:Uniprot/SWISSPROT;Acc:Q0MQH7]
15.1225 -14.73 6.15041e-05 131 7 5 40 [+] picture button
GDAP1L1 ENSPTRT00000059046 Ganglioside-induced differentiation-associated protein 1-like 1 (GDAP1-L1). [Source:Uniprot/SWISSPROT;Acc:Q96MZ0]
15.9212 -24.61 6.52613e-05 1078 12 7 17 [+] picture button
ACTR5 ENSPTRT00000025100 Actin-related protein 5 (hARP5) (Sarcoma antigen NY-SAR-16). [Source:Uniprot/SWISSPROT;Acc:Q9H9F9]
15.2469 -17.27 8.10434e-05 371 18 4 55 [+] picture button
SCAMP5 ENSPTRT00000046339 Secretory carrier-associated membrane protein 5 (Secretory carrier membrane protein 5). [Source:Uniprot/SWISSPROT;Acc:Q8TAC9]
15.1239 -21.75 8.41237e-05 2528 5 5 5 [+] picture button
K0401_HUMAN ENSPTRT00000022461 Uncharacterized protein KIAA0401. [Source:Uniprot/SWISSPROT;Acc:O43151]
15.0664 -17.89 8.85204e-05 392 17 6 43 [+] picture button
BBS2 ENSPTRT00000014991 Bardet-Biedl syndrome 2 protein. [Source:Uniprot/SWISSPROT;Acc:Q9BXC9]
15.5384 -15.81 8.94193e-05 372 18 7 47 [+] picture button
C10orf54 ENSPTRT00000043609 Platelet receptor Gi24 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9H7M9]
16.2232 -22.41 9.3071e-05 928 19 5 26 [+] picture button
ICOS ENSPTRT00000023807 Inducible T-cell co-stimulator precursor (Activation-inducible lymphocyte immunomediatory molecule) (CD278 antigen). [Source:Uniprot/SWISSPROT;Acc:Q9Y6W8]
15.3141 -16.25 9.63746e-05 1972 5 3 8 [+] picture button
ZNF438 ENSPTRT00000004414 Zinc finger protein 438. [Source:Uniprot/SWISSPROT;Acc:Q7Z4V0]
16.487 -19.74 9.6668e-05 179 10 5 30 [+] picture button
XR_021521.1 ENSPTRT00000031778 PREDICTED: Pan troglodytes hypothetical protein LOC747216 (LOC747216), mRNA. [Source:RefSeq_dna;Acc:XR_021521]
15.3098 -18.47 0.000103642 1379 12 5 20 [+] picture button
C20orf67 ENSPTRT00000025269 Phosphorylated CTD-interacting factor 1. [Source:Uniprot/SWISSPROT;Acc:Q9H4Z3]
17.0555 -21.85 0.000105067 263 12 6 40 [+] picture button
MCOLN1 ENSPTRT00000019097 Mucolipin-1 (Mucolipidin) (MG-2). [Source:Uniprot/SWISSPROT;Acc:Q9GZU1]
16.1459 -17.17 0.000109308 187 11 8 43 [+] picture button
IL1F5 ENSPTRT00000022976 Interleukin-1 family member 5 (IL-1F5) (Interleukin-1 delta) (IL-1 delta) (FIL1 delta) (Interleukin-1-like protein 1) (IL-1L1) (Interleukin-1 HY1) (IL-1HY1) (Interleukin-1 receptor antagonist homolog 1) (IL-1ra homolog 1) (IL-1-related protein 3) (IL-1RP3 [Source:Uniprot/SWISSPROT;Acc:Q9UBH0]
17.1161 -18.1 0.000142192 1000 17 3 37 [+] picture button
SLC30A3 ENSPTRT00000021898 Zinc transporter 3 (ZnT-3) (Solute carrier family 30 member 3). [Source:Uniprot/SWISSPROT;Acc:Q99726]
14.7897 -14.72 0.000161559 705 24 7 42 [+] picture button
NP_001035830.1 ENSPTRT00000014093 RIKEN cDNA 1700012G19 gene [Source:MarkerSymbol;Acc:MGI:1914328]RIKEN cDNA 1700012G19 gene [Source:MarkerSymbol;Acc:MGI:1914328] BY ORTHOLOGY TO:ENSMUST00000053024
15.2416 -21.91 0.000168121 2015 10 6 11 [+] picture button
HMGCR ENSPTRT00000031507 3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC 1.1.1.34) (HMG-CoA reductase). [Source:Uniprot/SWISSPROT;Acc:P04035]
14.779 -19.1 0.000173659 1761 4 5 3 [+] picture button
TRIB2 ENSPTRT00000021741 Tribbles homolog 2 (TRB-2). [Source:Uniprot/SWISSPROT;Acc:Q92519]
15.0958 -14.31 0.000174346 615 14 4 21 [+] picture button
BRUNOL6 ENSPTRT00000013376 Beta-hexosaminidase alpha chain precursor (EC 3.2.1.52) (N-acetyl- beta-glucosaminidase) (Beta-N-acetylhexosaminidase) (Hexosaminidase A). [Source:Uniprot/SWISSPROT;Acc:P06865]
14.8897 -20.63 0.000176887 639 23 7 35 [+] picture button
ISL1 ENSPTRT00000031273 Insulin gene enhancer protein ISL-1 (Islet-1). [Source:Uniprot/SWISSPROT;Acc:P61371]
15.6078 -15.9 0.000197721 822 13 12 25 [+] picture button
DPF1 ENSPTRT00000049926 Zinc-finger protein neuro-d4 (D4, zinc and double PHD fingers family 1). [Source:Uniprot/SWISSPROT;Acc:Q92782]
16.0322 -20.76 0.000201278 1000 11 6 38 [+] picture button
HAS1 ENSPTRT00000021192 Hyaluronan synthase 1 (EC 2.4.1.212) (Hyaluronate synthase 1) (Hyaluronic acid synthase 1) (HA synthase 1) (HuHAS1). [Source:Uniprot/SWISSPROT;Acc:Q92839]
14.9018 -22.7 0.000222448 1000 16 4 26 [+] picture button
XR_025143.1 ENSPTRT00000005494 PREDICTED: Pan troglodytes similar to PPRC1 protein (LOC450696), mRNA. [Source:RefSeq_dna;Acc:XR_025143]
16.9489 -19.35 0.000224163 1000 14 7 19 [+] picture button
SLC4A9 ENSPTRT00000032032 Anion exchange protein 4 (Anion exchanger 4) (Solute carrier family 4 member 9) (Sodium bicarbonate cotransporter 5). [Source:Uniprot/SWISSPROT;Acc:Q96Q91]
15.8047 -15.18 0.00026149 284 16 4 51 [+] picture button

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