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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Pan troglodytes and ptr-miR-28

245 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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PKD1L2 ENSPTRT00000047440 polycystin 1-like 2 isoform a [Source:RefSeq_peptide;Acc:NP_443124]
18.3062 -19.21 1.34515e-05 250 10 6 30 [+] picture button
ZBTB46 ENSPTRT00000043766 Zinc finger and BTB domain-containing protein 46 (BTB/POZ domain- containing protein 4) (Zinc finger protein 340). [Source:Uniprot/SWISSPROT;Acc:Q86UZ6]
19.1776 -33.44 2.47142e-05 385 21 7 57 [+] picture button
NNAT ENSPTRT00000025073 Neuronatin. [Source:Uniprot/SWISSPROT;Acc:Q16517]
18.889 -24.76 3.46114e-05 520 17 5 37 [+] picture button
COMMD4 ENSPTRT00000013469 COMM domain-containing protein 4. [Source:Uniprot/SWISSPROT;Acc:Q9H0A8]
16.8281 -17.14 4.88616e-05 266 13 5 46 [+] picture button
GPR45 ENSPTRT00000022848 Probable G-protein coupled receptor 45 (PSP24-alpha) (PSP24-1). [Source:Uniprot/SWISSPROT;Acc:Q9Y5Y3]
17.1198 -28.01 5.54119e-05 491 23 4 54 [+] picture button
FES ENSPTRT00000013761 Proto-oncogene tyrosine-protein kinase Fes/Fps (EC 2.7.10.2) (C-Fes). [Source:Uniprot/SWISSPROT;Acc:P07332]
17.5103 -16.87 9.38141e-05 218 14 6 49 [+] picture button
LYPD3 ENSPTRT00000020600 Ly6/PLAUR domain-containing protein 3 precursor (GPI-anchored metastasis-associated protein C4.4A homolog) (Matrigel-induced gene C4 protein) (MIG-C4). [Source:Uniprot/SWISSPROT;Acc:O95274]
19.9024 -34.22 0.000158975 1000 17 4 26 [+] picture button
CFDP1 ENSPTRT00000015410 Craniofacial development protein 1 (Bucentaur). [Source:Uniprot/SWISSPROT;Acc:Q9UEE9]
17.1692 -16.47 0.000208504 242 9 8 32 [+] picture button
EXOSC5 ENSPTRT00000020483 Exosome complex exonuclease RRP46 (EC 3.1.13.-) (Ribosomal RNA- processing protein 46) (Exosome component 5) (p12B) (Chronic myelogenous leukemia tumor antigen 28). [Source:Uniprot/SWISSPROT;Acc:Q9NQT4]
16.7144 -15.42 0.000299427 257 14 5 42 [+] picture button
PRKCQ ENSPTRT00000045745 Protein kinase C theta type (EC 2.7.11.13) (nPKC-theta). [Source:Uniprot/SWISSPROT;Acc:Q04759]
15.7492 -24.17 0.000365144 1034 14 6 18 [+] picture button
LUC7L ENSPTRT00000013883 Putative RNA-binding protein Luc7-like 1 (SR+89) (Putative SR protein LUC7B1). [Source:Uniprot/SWISSPROT;Acc:Q9NQ29]
15.9871 -19.87 0.000380367 371 17 6 39 [+] picture button
KCNE4 ENSPTRT00000024045 Potassium voltage-gated channel subfamily E member 4 (Minimum potassium ion channel-related peptide 3) (Potassium channel subunit beta MiRP3) (MinK-related peptide 3). [Source:Uniprot/SWISSPROT;Acc:Q8WWG9]
16.9646 -18.77 0.000385467 567 19 5 36 [+] picture button
C16orf77 ENSPTRT00000015330 Uncharacterized protein C16orf77. [Source:Uniprot/SPTREMBL;Acc:Q6ZMJ4]
15.925 -15.56 0.000442488 494 26 7 53 [+] picture button
TSSC1 ENSPTRT00000021659 Protein TSSC1 (Tumor-suppressing subchromosomal transferable fragment candidate gene 1 protein) (Tumor-suppressing STF cDNA 1 protein). [Source:Uniprot/SWISSPROT;Acc:Q53HC9]
16.2992 -14.17 0.000470147 353 14 7 53 [+] picture button
SNUPN ENSPTRT00000013476 Snurportin-1 (RNA U transporter 1). [Source:Uniprot/SWISSPROT;Acc:O95149]
17.2829 -17.55 0.000488897 275 14 6 46 [+] picture button
OPN4 ENSPTRT00000057656 Melanopsin (Opsin-4). [Source:Uniprot/SWISSPROT;Acc:Q9UHM6]
15.8585 -17.57 0.000489311 704 23 5 35 [+] picture button
XR_023100.1 ENSPTRT00000013280 PREDICTED: Pan troglodytes similar to ribosomal protein L4 variant (LOC460899), mRNA. [Source:RefSeq_dna;Acc:XR_023100]
16.0322 -15.59 0.00048969 102 5 5 23 [+] picture button
LDHD ENSPTRT00000015403 Probable D-lactate dehydrogenase, mitochondrial precursor (EC 1.1.2.4) (Lactate dehydrogenase D) (DLD). [Source:Uniprot/SWISSPROT;Acc:Q86WU2]
16.2442 -22.52 0.000490858 495 16 4 30 [+] picture button
CORO7 ENSPTRT00000014223 Coronin-7 (70 kDa WD repeat tumor rejection antigen homolog). [Source:Uniprot/SWISSPROT;Acc:P57737]
15.8019 -18 0.00050351 1000 19 5 27 [+] picture button
FAM48A ENSPTRT00000010652 Protein FAM48A (p38-interacting protein) (p38IP). [Source:Uniprot/SWISSPROT;Acc:Q8NEM7]
16.8051 -17.66 0.000597622 356 18 7 49 [+] picture button
DPF1 ENSPTRT00000049926 Zinc-finger protein neuro-d4 (D4, zinc and double PHD fingers family 1). [Source:Uniprot/SWISSPROT;Acc:Q92782]
16.9418 -15.51 0.0006164 1000 11 6 38 [+] picture button
SLU7 ENSPTRT00000032341 step II splicing factor SLU7 [Source:RefSeq_peptide;Acc:NP_006416]
15.8047 -10.27 0.000624741 133 7 5 24 [+] picture button
DMKN ENSPTRT00000056142 dermokine isoform beta [Source:RefSeq_peptide;Acc:NP_201574]
16.7144 -16.73 0.000640378 91 5 4 15 [+] picture button
PM14_HUMAN ENSPTRT00000021804 Pre-mRNA branch site protein p14 (SF3B 14 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:Q9Y3B4]
17.1692 -14.85 0.00066723 174 9 8 32 [+] picture button
PSMC4 ENSPTRT00000020361 26S protease regulatory subunit 6B (Proteasome 26S subunit ATPase 4) (MIP224) (MB67-interacting protein) (TAT-binding protein 7) (TBP-7). [Source:Uniprot/SWISSPROT;Acc:P43686]
16.2596 -25.35 0.00068799 139 6 5 21 [+] picture button
CHCHD5 ENSPTRT00000022964 Coiled-coil-helix-coiled-coil-helix domain-containing protein 5. [Source:Uniprot/SWISSPROT;Acc:Q9BSY4]
17.9022 -33.75 0.000695688 1000 12 2 15 [+] picture button
XR_020847.1 ENSPTRT00000012991 PREDICTED: Pan troglodytes similar to pallid (LOC739609), mRNA. [Source:RefSeq_dna;Acc:XR_020847]
15.8202 -13.35 0.000697408 1000 17 7 36 [+] picture button
GMIP ENSPTRT00000019818 GEM-interacting protein (GMIP). [Source:Uniprot/SWISSPROT;Acc:Q9P107]
15.8417 -19.12 0.000701304 487 17 5 37 [+] picture button
TTL ENSPTRT00000022959 Tubulin--tyrosine ligase (EC 6.3.2.25) (TTL). [Source:Uniprot/SWISSPROT;Acc:Q8NG68]
15.7901 -16.62 0.000701857 689 23 4 43 [+] picture button
XR_023910.1 ENSPTRT00000032012 PREDICTED: Pan troglodytes hypothetical LOC471314 (LOC471314), mRNA. [Source:RefSeq_dna;Acc:XR_023910]
15.7608 -17.88 0.000752067 1502 10 5 9 [+] picture button
TTC18 ENSPTRT00000004943 tetratricopeptide repeat domain 18 [Source:RefSeq_peptide;Acc:NP_660153]
18.8747 -23.7 0.0008475 209 10 6 39 [+] picture button
SEMA7A ENSPTRT00000013432 Semaphorin-7A precursor (Semaphorin L) (Sema L) (Semaphorin K1) (Sema K1) (John-Milton-Hargen human blood group Ag) (JMH blood group antigen) (CD108 antigen) (CDw108). [Source:Uniprot/SWISSPROT;Acc:O75326]
17.058 -21.58 0.000898643 642 23 6 39 [+] picture button
PPP1R14D ENSPTRT00000012782 Protein phosphatase 1 regulatory subunit 14D (Gastrointestinal and brain-specific PP1-inhibitory protein 1) (GBPI-1). [Source:Uniprot/SWISSPROT;Acc:Q9NXH3]
17.1692 -16.05 0.000950336 243 14 6 40 [+] picture button
PRF1 ENSPTRT00000004875 Perforin-1 precursor (P1) (Lymphocyte pore-forming protein) (PFP) (Cytolysin). [Source:Uniprot/SWISSPROT;Acc:P14222]
16.7276 -15.26 0.000983269 700 18 4 21 [+] picture button
SLC4A3 ENSPTRT00000024024 Anion exchange protein 3 (Neuronal band 3-like protein) (Solute carrier family 4 member 3) (Cardiac/brain band 3-like protein) (CAE3/BAE3). [Source:Uniprot/SWISSPROT;Acc:P48751]
17.5103 -26.49 0.00100211 243 13 6 50 [+] picture button
BIVM ENSPTRT00000011047 basic, immunoglobulin-like variable motif containing [Source:RefSeq_peptide;Acc:NP_060163]
15.7649 -18.85 0.00101344 1674 4 3 4 [+] picture button
ZRANB3 ENSPTRT00000023179 Zinc finger Ran-binding domain-containing protein 3 (EC 3.6.1.-). [Source:Uniprot/SWISSPROT;Acc:Q5FWF4]
16.9508 -18.77 0.00103283 336 17 5 45 [+] picture button
PXDN ENSPTRT00000021645 peroxidasin homolog [Source:RefSeq_peptide;Acc:NP_036425]
15.6724 -18.83 0.00106195 1019 12 7 14 [+] picture button
PROCR ENSPTRT00000024957 Endothelial protein C receptor precursor (Endothelial cell protein C receptor) (Activated protein C receptor) (APC receptor) (CD201 antigen). [Source:Uniprot/SWISSPROT;Acc:Q9UNN8]
16.6383 -17.94 0.00109879 1000 18 4 33 [+] picture button
FAM100A ENSPTRT00000014232 Protein FAM100A. [Source:Uniprot/SWISSPROT;Acc:Q8TB05]
16.9303 -22.57 0.00109969 748 25 6 34 [+] picture button
METTL8 ENSPTRT00000023405 methyltransferase like 8 [Source:RefSeq_peptide;Acc:NP_079046]
18.1925 -22.69 0.00111286 260 13 4 42 [+] picture button
HDC ENSPTRT00000013034 Histidine decarboxylase (EC 4.1.1.22) (HDC). [Source:Uniprot/SWISSPROT;Acc:P19113]
17.364 -16.4 0.00114508 305 17 7 55 [+] picture button
ILVBL ENSPTRT00000019575 ilvB (bacterial acetolactate synthase)-like isoform 1 [Source:RefSeq_peptide;Acc:NP_006835]
17.0555 -21.21 0.0011998 264 14 6 43 [+] picture button
CD320 ENSPTRT00000019149 CD320 antigen precursor (8D6 antigen) (FDC-signaling molecule 8D6) (FDC-SM-8D6). [Source:Uniprot/SWISSPROT;Acc:Q9NPF0]
16.614 -20.77 0.00120841 336 18 6 62 [+] picture button
RASL11A ENSPTRT00000010550 RAS-like, family 11, member A [Source:RefSeq_peptide;Acc:NP_996563]
15.691 -18.7 0.00143034 191 9 7 29 [+] picture button
BST2 ENSPTRT00000019678 Bone marrow stromal antigen 2 precursor (BST-2) (CD317 antigen) (HM1.24 antigen). [Source:Uniprot/SWISSPROT;Acc:Q10589]
16.5177 -18.12 0.00148806 392 18 4 59 [+] picture button
Q4G0P3-5 ENSPTRT00000015344 hydrocephalus inducing isoform b [Source:RefSeq_peptide;Acc:NP_060028]
16.5067 -20.79 0.00152339 482 18 4 35 [+] picture button
IGF1R ENSPTRT00000013802 Insulin-like growth factor 1 receptor precursor (EC 2.7.10.1) (Insulin-like growth factor I receptor) (IGF-I receptor) (CD221 antigen) [Contains: Insulin-like growth factor 1 receptor alpha chain; Insulin-like growth factor 1 receptor beta chain]. [Source:Uniprot/SWISSPROT;Acc:P08069]
16.0368 -12.98 0.00153757 384 18 9 53 [+] picture button
CCDC69 ENSPTRT00000032238 coiled-coil domain containing 69 [Source:RefSeq_peptide;Acc:NP_056436]
16.2487 -13.1 0.00158242 386 20 4 55 [+] picture button
CNGB1 ENSPTRT00000015067 Cyclic nucleotide-gated cation channel 4 (CNG channel 4) (CNG-4) (CNG4) (Cyclic nucleotide-gated cation channel modulatory subunit). [Source:Uniprot/SWISSPROT;Acc:Q14028]
15.8131 -16.19 0.00166863 361 18 4 52 [+] picture button

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