spacer

Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Pan troglodytes and ptr-miR-16

258 hits found.


Page 1 of 6
1 2 3 4 5 6 next >>

Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
picture button picture button picture button picture button picture button picture button picture button picture button picture button picture button
CCNE1 ENSPTRT00000019964 G1/S-specific cyclin-E1. [Source:Uniprot/SWISSPROT;Acc:P24864]
17.8525 -16.4 8.00024e-09 533 18 9 38 [+] picture button
AP2A1 ENSPTRT00000021038 AP-2 complex subunit alpha-1 (Adapter-related protein complex 2 alpha- 1 subunit) (Alpha-adaptin A) (Adaptor protein complex AP-2 alpha-1 subunit) (Clathrin assembly protein complex 2 alpha-A large chain) (100 kDa coated vesicle protein A) (Plasma membran [Source:Uniprot/SWISSPROT;Acc:O95782]
16.1224 -13.74 1.57528e-06 1000 19 7 28 [+] picture button
POLR3F ENSPTRT00000024694 DNA-directed RNA polymerase III subunit F (EC 2.7.7.6) (DNA-directed RNA polymerase III 39 kDa polypeptide) (RNA polymerase III C39 subunit). [Source:Uniprot/SWISSPROT;Acc:Q9H1D9]
15.5964 -15.41 1.58589e-06 1079 13 7 20 [+] picture button
PPAP2A ENSPTRT00000031311 Lipid phosphate phosphohydrolase 1 (EC 3.1.3.4) (Phosphatidic acid phosphatase 2a) (Phosphatidate phosphohydrolase type 2a) (PAP2a) (PAP- 2a) (PAP2-alpha). [Source:Uniprot/SWISSPROT;Acc:O14494]
17.1692 -13.65 1.82867e-06 290 15 9 56 [+] picture button
USP3 ENSPTRT00000013198 Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3) (Deubiquitinating enzyme 3). [Source:Uniprot/SWISSPROT;Acc:Q9Y6I4]
17.1263 -16.32 1.9745e-06 618 23 9 45 [+] picture button
ZNF508 ENSPTRT00000018596 Zinc finger protein 508. [Source:Uniprot/SWISSPROT;Acc:Q6IQ32]
15.8579 -20.69 2.3614e-06 1540 8 5 11 [+] picture button
PSMD7 ENSPTRT00000015384 26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Mov34 protein homolog). [Source:Uniprot/SWISSPROT;Acc:P51665]
17.3286 -19.35 2.88166e-06 553 20 7 39 [+] picture button
GDF9 ENSPTRT00000031893 Growth/differentiation factor 9 precursor (GDF-9). [Source:Uniprot/SWISSPROT;Acc:O60383]
15.9001 -12.59 3.55729e-06 402 16 5 46 [+] picture button
ACVR2A ENSPTRT00000023213 Activin receptor type-2A precursor (EC 2.7.11.30) (Activin receptor type IIA) (ACTR-IIA) (ACTRIIA). [Source:Uniprot/SWISSPROT;Acc:P27037]
16.0072 -26.52 4.63364e-06 3539 3 10 3 [+] picture button
SALL4 ENSPTRT00000025403 Sal-like protein 4 (Zinc finger protein SALL4). [Source:Uniprot/SWISSPROT;Acc:Q9UJQ4]
17.7377 -16.06 5.48018e-06 217 13 6 56 [+] picture button
CCNT2 ENSPTRT00000045615 Cyclin-T2 (CycT2). [Source:Uniprot/SWISSPROT;Acc:O60583]
17.6021 -23.92 6.23656e-06 1000 24 10 46 [+] picture button
RPUSD2 ENSPTRT00000012765 RNA pseudouridylate synthase domain containing 2 [Source:RefSeq_peptide;Acc:NP_689473]
16.826 -18.91 7.4466e-06 429 17 6 46 [+] picture button
FSD1 ENSPTRT00000018924 fibronectin type III and SPRY domain containing 1 [Source:RefSeq_peptide;Acc:NP_077309]
16.3519 -14.99 1.1034e-05 1000 21 6 46 [+] picture button
DCLK1 ENSPTRT00000010635 Serine/threonine-protein kinase DCAMKL1 (EC 2.7.11.1) (Doublecortin- like and CAM kinase-like 1). [Source:Uniprot/SWISSPROT;Acc:O15075]
16.345 -15.55 1.12654e-05 1000 18 6 22 [+] picture button
XR_024858.1 ENSPTRT00000023744 PREDICTED: Pan troglodytes similar to amyotrophic lateral sclerosis 2 (LOC456841), mRNA. [Source:RefSeq_dna;Acc:XR_024858]
17.0718 -10.83 1.41008e-05 556 17 9 34 [+] picture button
NP_872380.1 ENSPTRT00000049877 likely ortholog of MEF2-activating SAP transcriptional regulator (FLJ36070), mRNA [Source:RefSeq_dna;Acc:NM_182574]
17.1692 -20.36 1.42515e-05 269 15 4 48 [+] picture button
STUB1 ENSPTRT00000013925 STIP1 homology and U box-containing protein 1 (EC 6.3.2.-) (STIP1 homology and U-box-containing protein 1) (Carboxy terminus of Hsp70- interacting protein) (E3 ubiquitin protein ligase CHIP) (CLL- associated antigen KW-8) (Antigen NY-CO-7). [Source:Uniprot/SWISSPROT;Acc:Q9UNE7]
15.9185 -14.61 1.45255e-05 283 16 7 65 [+] picture button
BBS2 ENSPTRT00000014991 Bardet-Biedl syndrome 2 protein. [Source:Uniprot/SWISSPROT;Acc:Q9BXC9]
15.7604 -19.23 1.67436e-05 372 18 7 47 [+] picture button
WWC1 ENSPTRT00000032365 WW domain-containing protein 1 (Kidney and brain protein) (KIBRA) (HBeAg-binding protein 3). [Source:Uniprot/SWISSPROT;Acc:Q8IX03]
17.4761 -18.15 2.04711e-05 734 23 7 39 [+] picture button
XR_025378.1 ENSPTRT00000031099 PREDICTED: Pan troglodytes hypothetical LOC461736 (LOC461736), mRNA. [Source:RefSeq_dna;Acc:XR_025378]
16.487 -14 2.05647e-05 137 7 7 19 [+] picture button
SNCG ENSPTRT00000005118 Gamma-synuclein (Persyn) (Breast cancer-specific gene 1 protein) (Synoretin) (SR). [Source:Uniprot/SWISSPROT;Acc:O76070]
17.276 -21.48 3.5282e-05 330 17 5 49 [+] picture button
FGF8 ENSPTRT00000005468 Fibroblast growth factor 8 precursor (FGF-8) (HBGF-8) (Androgen- induced growth factor) (AIGF). [Source:Uniprot/SWISSPROT;Acc:P55075]
15.7712 -16.49 3.70879e-05 1000 21 6 31 [+] picture button
COPS2 ENSPTRT00000013013 COP9 signalosome complex subunit 2 (Signalosome subunit 2) (SGN2) (JAB1-containing signalosome subunit 2) (Thyroid receptor-interacting protein 15) (TRIP-15) (Alien homolog). [Source:Uniprot/SWISSPROT;Acc:P61201]
15.9233 -16.29 3.98091e-05 597 19 10 37 [+] picture button
GORASP2 ENSPTRT00000023400 Golgi reassembly-stacking protein 2 (GRS2) (Golgi reassembly-stacking protein of 55 kDa) (GRASP55) (p59) (Golgi phosphoprotein 6) (GOLPH6). [Source:Uniprot/SWISSPROT;Acc:Q9H8Y8]
15.7145 -13.57 5.58253e-05 992 19 7 21 [+] picture button
ANKS4B ENSPTRT00000014476 Ankyrin repeat and SAM domain-containing protein 4B (Harmonin- interacting ankyrin repeat-containing protein) (Harp). [Source:Uniprot/SWISSPROT;Acc:Q8N8V4]
15.9255 -11.69 6.46431e-05 716 12 4 22 [+] picture button
PNPLA6 ENSPTRT00000019099 neuropathy target esterase [Source:RefSeq_peptide;Acc:NP_006693]
16.7144 -12.34 7.13875e-05 166 10 5 52 [+] picture button
RPN2 ENSPTRT00000042748 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDa subunit precursor (EC 2.4.1.119) (Ribophorin II) (RPN-II) (RIBIIR). [Source:Uniprot/SWISSPROT;Acc:P04844]
17.002 -13.79 7.15542e-05 1000 13 4 23 [+] picture button
XR_023356.1 ENSPTRT00000049493 PREDICTED: Pan troglodytes similar to FLJ20758 protein (LOC469033), mRNA. [Source:RefSeq_dna;Acc:XR_023356]
16.3523 -21.84 7.27153e-05 632 18 5 41 [+] picture button
SIA8E_PANTR ENSPTRT00000018352 Alpha-2,8-sialyltransferase 8E (EC 2.4.99.-) (ST8Sia V). [Source:Uniprot/SWISSPROT;Acc:P61646]
15.646 -16.98 7.30037e-05 912 16 5 22 [+] picture button
MBNL2 ENSPTRT00000060119 Muscleblind-like protein 2 (Muscleblind-like protein-like) (Muscleblind-like protein-like 39) (Muscleblind-like protein 1). [Source:Uniprot/SWISSPROT;Acc:Q5VZF2]
16.5592 -18.73 9.12711e-05 561 24 8 44 [+] picture button
ELAC1 ENSPTRT00000018402 Zinc phosphodiesterase ELAC protein 1 (EC 3.1.26.11) (Ribonuclease Z 1) (RNase Z 1) (tRNase Z 1) (tRNA 3 endonuclease 1) (ElaC homolog protein 1) (Deleted in Ma29). [Source:Uniprot/SWISSPROT;Acc:Q9H777]
16.7444 -19.65 9.3364e-05 1035 20 5 30 [+] picture button
IL18RAP ENSPTRT00000022840 Interleukin-18 receptor accessory protein precursor (IL-18 receptor accessory protein) (IL-18RAcP) (Interleukin-18 receptor accessory protein-like) (IL-18Rbeta) (IL-1R accessory protein-like) (IL-1RAcPL) (Accessory protein-like) (AcPL) (IL-1R7) (CD218b an [Source:Uniprot/SWISSPROT;Acc:O95256]
16.2596 -11.53 9.4303e-05 125 5 4 20 [+] picture button
DLL4 ENSPTRT00000012788 Delta-like protein 4 precursor (Drosophila Delta homolog 4). [Source:Uniprot/SWISSPROT;Acc:Q9NR61]
15.8019 -20.34 9.75624e-05 1000 20 7 22 [+] picture button
TTC1 ENSPTRT00000032330 Tetratricopeptide repeat protein 1 (TPR repeat protein 1). [Source:Uniprot/SWISSPROT;Acc:Q99614]
17.8385 -18.42 9.83845e-05 447 19 6 37 [+] picture button
VPS33B ENSPTRT00000044446 Vacuolar protein sorting-associated protein 33B (hVPS33B). [Source:Uniprot/SWISSPROT;Acc:Q9H267]
16.0612 -13.5 0.000101887 429 21 7 63 [+] picture button
C19orf50 ENSPTRT00000019757 Uncharacterized protein C19orf50 (Fragment). [Source:Uniprot/SPTREMBL;Acc:O76098]
16.5889 -26.16 0.000112518 702 18 7 26 [+] picture button
ISLR ENSPTRT00000013420 immunoglobulin superfamily containing leucine-rich repeat [Source:RefSeq_peptide;Acc:NP_958934]
16.0147 -15.76 0.000116146 726 19 6 27 [+] picture button
NOB1 ENSPTRT00000015280 RNA-binding protein NOB1 (Protein ART-4) (Phosphorylation regulatory protein HP-10). [Source:Uniprot/SWISSPROT;Acc:Q9ULX3]
17.3966 -18.82 0.000133167 171 9 3 36 [+] picture button
LIPE ENSPTRT00000020543 Hormone-sensitive lipase (EC 3.1.1.79) (HSL). [Source:Uniprot/SWISSPROT;Acc:Q05469]
16.2718 -21.64 0.000138741 1000 21 5 33 [+] picture button
NP_786883.1 ENSPTRT00000012698 nuclear protein in testis [Source:RefSeq_peptide;Acc:NP_786883]
16.6007 -15.88 0.000150248 242 9 6 37 [+] picture button
PEX13 ENSPTRT00000022251 Peroxisomal membrane protein PEX13 (Peroxin-13). [Source:Uniprot/SWISSPROT;Acc:Q92968]
16.3353 -18.73 0.000167276 486 17 7 42 [+] picture button
IFT140 ENSPTRT00000014019 Intraflagellar transport 140 homolog (WD and tetratricopeptide repeats protein 2). [Source:Uniprot/SWISSPROT;Acc:Q96RY7]
17.7858 -25.11 0.000185399 514 16 4 35 [+] picture button
CARTPT ENSPTRT00000031468 Cocaine- and amphetamine-regulated transcript protein precursor [Contains: CART(1-39); CART(42-89)]. [Source:Uniprot/SWISSPROT;Acc:Q16568]
15.7294 -11.78 0.0002019 430 13 6 33 [+] picture button
PDCD11 ENSPTRT00000005542 RRP5 protein homolog (Programmed cell death protein 11). [Source:Uniprot/SWISSPROT;Acc:Q14690]
17.0798 -16.07 0.000219206 713 15 5 31 [+] picture button
SFRS16 ENSPTRT00000046912 Splicing factor, arginine/serine-rich 16 (Suppressor of white-apricot homolog 2). [Source:Uniprot/SWISSPROT;Acc:Q8N2M8]
16.7144 -17.01 0.000235122 111 2 6 19 [+] picture button
XR_024654.1 ENSPTRT00000013606 PREDICTED: Pan troglodytes similar to SPRY domain containing 1 (LOC453595), mRNA. [Source:RefSeq_dna;Acc:XR_024654]
18.6197 -22.95 0.000316156 1000 15 4 35 [+] picture button
C15orf41 ENSPTRT00000012720 Uncharacterized protein C15orf41 (Protein HH114). [Source:Uniprot/SWISSPROT;Acc:Q9Y2V0]
16.4394 -14.7 0.000323247 1351 12 5 14 [+] picture button
C2orf42 ENSPTRT00000022377 Uncharacterized protein C2orf42. [Source:Uniprot/SPTREMBL;Acc:Q9NWW7]
17.2087 -12.25 0.000323317 468 20 8 54 [+] picture button
CRHBP ENSPTRT00000031528 Corticotropin-releasing factor-binding protein precursor (CRF-binding protein) (CRF-BP) (Corticotropin-releasing hormone-binding protein) (CRH-BP). [Source:Uniprot/SWISSPROT;Acc:P24387]
15.9103 -19.57 0.000326248 588 20 6 42 [+] picture button
SETD6 ENSPTRT00000015087 SET domain-containing protein 6. [Source:Uniprot/SWISSPROT;Acc:Q8TBK2]
16.0213 -19.12 0.000370242 1000 15 4 25 [+] picture button

Page 1 of 6
1 2 3 4 5 6 next >>

Download table: GFF TXT
spacer
spacer