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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Pan troglodytes and ptr-miR-127

216 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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XR_024332.1 ENSPTRT00000018396 PREDICTED: Pan troglodytes similar to 63kDa protein kinase (LOC468536), mRNA. [Source:RefSeq_dna;Acc:XR_024332]
15.1098 -19.7 1.68513e-05 2060 6 6 6 [+] picture button
ZCD1 ENSPTRT00000004707 Zinc finger CDGSH domain-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q9NZ45]
15.0894 -12.1 5.87248e-05 448 19 7 47 [+] picture button
RAX ENSPTRT00000018451 Retinal homeobox protein Rx (Retina and anterior neural fold homeobox protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y2V3]
15.6296 -16.35 7.33734e-05 486 20 5 37 [+] picture button
TRIM54 ENSPTRT00000021901 Tripartite motif-containing protein 54 (Muscle-specific RING finger protein 3) (MuRF3) (MURF-3) (Muscle-specific RING finger protein) (MuRF) (RING finger protein 30). [Source:Uniprot/SWISSPROT;Acc:Q9BYV2]
15.421 -23.47 8.3534e-05 551 16 7 31 [+] picture button
BMS1 ENSPTRT00000004533 Ribosome biogenesis protein BMS1 homolog. [Source:Uniprot/SWISSPROT;Acc:Q14692]
15.7751 -14.67 0.000103322 305 16 6 51 [+] picture button
XR_022314.1 ENSPTRT00000018621 PREDICTED: Pan troglodytes similar to Cell division cycle 34 homolog (S. cerevisiae) (LOC749854), mRNA. [Source:RefSeq_dna;Acc:XR_022314]
14.945 -21.03 0.000103857 532 23 6 49 [+] picture button
MLRS_HUMAN ENSPTRT00000014760 Myosin regulatory light chain 2, skeletal muscle isoform (Fast skeletal myosin light chain 2) (MLC2B). [Source:Uniprot/SWISSPROT;Acc:Q96A32]
15.4426 -29.62 0.000141405 1000 15 3 25 [+] picture button
ENSPTRT00000057915 similar to proline-rich proteoglycan 2 (LOC389936), mRNA [Source:RefSeq_dna;Acc:NM_001013656]similar to proline-rich proteoglycan 2 (LOC389936), mRNA [Source:RefSeq_dna;Acc:NM_001013656] BY ORTHOLOGY TO:ENST00000334127
15.5175 -30.56 0.00015232 1000 23 2 11 [+] picture button
ITPA ENSPTRT00000024503 Inosine triphosphate pyrophosphatase (EC 3.6.1.19) (ITPase) (Inosine triphosphatase) (Putative oncogene protein hlc14-06-p). [Source:Uniprot/SWISSPROT;Acc:Q9BY32]
15.4356 -27.29 0.000161737 395 19 6 65 [+] picture button
PRSS22 ENSPTRT00000014140 Brain-specific serine protease 4 precursor (EC 3.4.21.-) (BSSP-4) (Serine protease 22) (Serine protease 26) (Tryptase epsilon). [Source:Uniprot/SWISSPROT;Acc:Q9GZN4]
17.624 -26.44 0.000169447 361 15 6 42 [+] picture button
TAF5 ENSPTRT00000005539 Transcription initiation factor TFIID subunit 5 (Transcription initiation factor TFIID 100 kDa subunit) (TAF(II)100) (TAFII-100) (TAFII100). [Source:Uniprot/SWISSPROT;Acc:Q15542]
14.7789 -16.66 0.000206811 838 20 8 33 [+] picture button
ING5 ENSPTRT00000024372 Inhibitor of growth protein 5 (p28ING5). [Source:Uniprot/SWISSPROT;Acc:Q8WYH8]
15.5412 -22.77 0.000209495 975 17 7 20 [+] picture button
ENSPTRT00000018851 RIKEN cDNA 4930404N11 gene [Source:MarkerSymbol;Acc:MGI:1921072]RIKEN cDNA 4930404N11 gene [Source:MarkerSymbol;Acc:MGI:1921072] BY ORTHOLOGY TO:ENSMUST00000020456
16.6362 -28.87 0.000227167 1000 25 4 40 [+] picture button
NUP155 ENSPTRT00000031196 Nuclear pore complex protein Nup155 (Nucleoporin Nup155) (155 kDa nucleoporin). [Source:Uniprot/SWISSPROT;Acc:O75694]
15.8047 -22.88 0.000227597 61 3 5 12 [+] picture button
RANBP3 ENSPTRT00000019025 Ran-binding protein 3 (RanBP3). [Source:Uniprot/SWISSPROT;Acc:Q9H6Z4]
15.1225 -22.97 0.000246503 230 13 6 47 [+] picture button
CAMK1D ENSPTRT00000004207 Calcium/calmodulin-dependent protein kinase type 1D (EC 2.7.11.17) (CaM kinase ID) (CaM kinase I delta) (CaMKI-delta) (CaM-KI delta) (CaMKI delta) (Camk1D) (CamKI-like protein kinase) (CKLiK). [Source:Uniprot/SWISSPROT;Acc:Q8IU85]
15.3423 -19.37 0.000249587 1000 18 7 31 [+] picture button
QPCTL ENSPTRT00000020750 glutaminyl-peptide cyclotransferase-like [Source:RefSeq_peptide;Acc:NP_060129]
17.2211 -33.07 0.000260896 1000 12 4 14 [+] picture button
CNGB1 ENSPTRT00000015067 Cyclic nucleotide-gated cation channel 4 (CNG channel 4) (CNG-4) (CNG4) (Cyclic nucleotide-gated cation channel modulatory subunit). [Source:Uniprot/SWISSPROT;Acc:Q14028]
16.5926 -25.25 0.000295239 361 18 4 52 [+] picture button
EMILIN1 ENSPTRT00000021882 EMILIN-1 precursor (Elastin microfibril interface-located protein 1) (Elastin microfibril interfacer 1). [Source:Uniprot/SWISSPROT;Acc:Q9Y6C2]
15.3911 -26.24 0.000368111 380 19 4 39 [+] picture button
USP39 ENSPTRT00000022564 U4/U6.U5 tri-snRNP-associated protein 2 (U4/U6.U5 tri-snRNP-associated 65 kDa protein) (65K) (Inactive ubiquitin-specific peptidase 39) (SAD1 homolog). [Source:Uniprot/SWISSPROT;Acc:Q53GS9]
15.2605 -25.03 0.000399665 468 21 6 42 [+] picture button
PGPEP1 ENSPTRT00000019740 Pyroglutamyl-peptidase 1 (EC 3.4.19.3) (Pyroglutamyl-peptidase I) (Pyrrolidone-carboxylate peptidase) (5-oxoprolyl-peptidase) (PGP-I). [Source:Uniprot/SWISSPROT;Acc:Q9NXJ5]
16.1918 -22.78 0.000432775 1000 17 4 27 [+] picture button
NP_954974.2 ENSPTRT00000058998 CDNA FLJ43249 fis, clone HEART2001756. [Source:Uniprot/SPTREMBL;Acc:Q6ZUX3]
17.0555 -19.74 0.000437732 131 6 4 15 [+] picture button
C1QL3 ENSPTRT00000004262 Complement C1q-like protein 3 precursor. [Source:Uniprot/SWISSPROT;Acc:Q5VWW1]
16.2596 -19.54 0.00045552 61 3 7 11 [+] picture button
LSM4 ENSPTRT00000060623 U6 snRNA-associated Sm-like protein LSm4 (Glycine-rich protein) (GRP). [Source:Uniprot/SWISSPROT;Acc:Q9Y4Z0]
17.2021 -32.3 0.000481145 1000 18 5 26 [+] picture button
KAZALD1 ENSPTRT00000005450 Kazal-type serine protease inhibitor domain-containing protein 1 precursor. [Source:Uniprot/SWISSPROT;Acc:Q96I82]
15.2636 -27.95 0.000491739 789 18 4 25 [+] picture button
REM1 ENSPTRT00000024804 GTP-binding protein REM 1 (Rad and Gem-like GTP-binding protein 1) (GTPase-regulating endothelial cell sprouting). [Source:Uniprot/SWISSPROT;Acc:O75628]
15.1315 -22.49 0.000503167 474 18 6 42 [+] picture button
NP_001013685.1 ENSPTRT00000021821 similar to CG14903-PA (LOC391356), mRNA [Source:RefSeq_dna;Acc:NM_001013663]
16.487 -19.56 0.000526759 157 8 6 35 [+] picture button
C10orf35 ENSPTRT00000004837 Uncharacterized protein C10orf35. [Source:Uniprot/SWISSPROT;Acc:Q96D05]
18.2658 -27.48 0.000530808 532 18 6 46 [+] picture button
PITX1 ENSPTRT00000031941 Pituitary homeobox 1 (Hindlimb expressed homeobox protein backfoot). [Source:Uniprot/SWISSPROT;Acc:P78337]
16.9572 -31.72 0.000546716 994 19 5 22 [+] picture button
MCTP2 ENSPTRT00000043894 multiple C2-domains with two transmembrane regions 2 [Source:RefSeq_peptide;Acc:NP_060819]
15.7019 -23.54 0.000619248 1000 16 6 19 [+] picture button
TYOBP_PANTR ENSPTRT00000020147 TYRO protein tyrosine kinase-binding protein precursor. [Source:Uniprot/SWISSPROT;Acc:A4F4L0]
15.2362 -15.37 0.000631767 159 7 6 21 [+] picture button
COG7 ENSPTRT00000014529 Conserved oligomeric Golgi complex component 7. [Source:Uniprot/SWISSPROT;Acc:P83436]
16.7144 -33.87 0.000732558 275 13 5 54 [+] picture button
KCNN1 ENSPTRT00000019714 Small conductance calcium-activated potassium channel protein 1 (SK1). [Source:Uniprot/SWISSPROT;Acc:Q92952]
14.9017 -24.05 0.000743506 715 25 6 35 [+] picture button
XR_023914.1 ENSPTRT00000043656 PREDICTED: Pan troglodytes hypothetical LOC456352 (LOC456352), mRNA. [Source:RefSeq_dna;Acc:XR_023914]
17.8416 -29.87 0.00075493 528 23 5 46 [+] picture button
TTYH1 ENSPTRT00000055896 tweety 1 isoform 2 [Source:RefSeq_peptide;Acc:NP_001005367]
15.0414 -28.52 0.000783328 501 23 4 30 [+] picture button
HK3 ENSPTRT00000032477 Hexokinase-3 (EC 2.7.1.1) (Hexokinase type III) (HK III). [Source:Uniprot/SWISSPROT;Acc:P52790]
16.1459 -21.47 0.000792256 201 10 7 34 [+] picture button
DIRAS1 ENSPTRT00000056399 GTP-binding protein Di-Ras1 (Distinct subgroup of the Ras family member 1) (Ras-related inhibitor of cell growth) (Rig protein) (Small GTP-binding tumor suppressor 1). [Source:Uniprot/SWISSPROT;Acc:O95057]
17.3278 -29.22 0.000902551 1000 13 4 14 [+] picture button
GTPBP3 ENSPTRT00000019675 tRNA modification GTPase GTPBP3, mitochondrial precursor (GTP-binding protein 3) (Mitochondrial GTP-binding protein 1). [Source:Uniprot/SWISSPROT;Acc:Q969Y2]
14.8467 -26.75 0.000971165 1002 18 5 24 [+] picture button
SH3TC2 ENSPTRT00000032177 SH3 domain and tetratricopeptide repeats-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q8TF17]
16.6007 -21.11 0.00100789 90 5 3 16 [+] picture button
DHX38 ENSPTRT00000015377 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 (EC 3.6.1.-) (ATP-dependent RNA helicase DHX38) (DEAH box protein 38). [Source:Uniprot/SWISSPROT;Acc:Q92620]
15.3561 -25.31 0.00104079 414 17 5 47 [+] picture button
NEIL1 ENSPTRT00000013470 Endonuclease VIII-like 1 (EC 3.2.2.-) (EC 4.2.99.18) (Nei-like 1) (DNA glycosylase/AP lyase Neil1) (DNA-(apurinic or apyrimidinic site) lyase Neil1) (NEH1) (FPG1). [Source:Uniprot/SWISSPROT;Acc:Q96FI4]
15.0088 -23.53 0.00107715 211 11 5 33 [+] picture button
Q08I02_PANTR ENSPTRT00000021386 Natural cytotoxicity triggering receptor 1 NKp46. [Source:Uniprot/SPTREMBL;Acc:Q08I01]
17.1692 -24.11 0.00108233 196 9 3 35 [+] picture button
PTPRH ENSPTRT00000021424 protein tyrosine phosphatase, receptor type, H precursor [Source:RefSeq_peptide;Acc:NP_002833]
14.918 -22.46 0.00113167 506 19 4 38 [+] picture button
OLFM2 ENSPTRT00000019211 Noelin-2 precursor (Olfactomedin-2). [Source:Uniprot/SWISSPROT;Acc:O95897]
16.8281 -18.09 0.00122231 447 16 6 53 [+] picture button
IL12RB1 ENSPTRT00000019719 Interleukin-12 receptor beta-1 chain precursor (IL-12R-beta1) (Interleukin-12 receptor beta) (IL-12 receptor beta component) (IL- 12RB1) (CD212 antigen). [Source:Uniprot/SWISSPROT;Acc:P42701]
17.4528 -29.83 0.00128905 613 21 3 42 [+] picture button
XR_023305.1 ENSPTRT00000021788 PREDICTED: Pan troglodytes hypothetical LOC470322 (LOC470322), mRNA. [Source:RefSeq_dna;Acc:XR_023305]
15.8047 -20.22 0.00130253 65 5 5 15 [+] picture button
LASS4 ENSPTRT00000019148 LAG1 longevity assurance homolog 4. [Source:Uniprot/SWISSPROT;Acc:Q9HA82]
16.0261 -22.07 0.00136814 301 17 6 65 [+] picture button
ENSPTRT00000055907 NOT ANNOTATED
15.0199 -26.28 0.00142049 1000 12 2 15 [+] picture button
NDST1 ENSPTRT00000032221 Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 (EC 2.8.2.8) (Glucosaminyl N-deacetylase/N-sulfotransferase 1) (NDST- 1) ([Heparan sulfate]-glucosamine N-sulfotransferase 1) (HSNST 1) (N- heparan sulfate sulfotransferase 1) (N-HSST 1) [Inc [Source:Uniprot/SWISSPROT;Acc:P52848]
14.8778 -25.42 0.00152577 555 19 6 35 [+] picture button
NP_060741.2 ENSPTRT00000043697 CDNA FLJ10916 fis, clone OVARC1000309, weakly similar to THREONINE SYNTHASE (EC 4.2.99.2) (Hypothetical protein FLJ10916). [Source:Uniprot/SPTREMBL;Acc:Q9NV54]
17.0754 -28.57 0.0015376 503 21 4 39 [+] picture button

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