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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gallus gallus and hsa-miR-28-3p

621 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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C15orf48 ENSGALT00000041092 Normal mucosa of esophagus-specific gene 1 protein (Protein FOAP-11). [Source:Uniprot/SWISSPROT;Acc:Q9C002]
16.5473 -20.89 0.0000158543 600 11 9 14 [+] picture button
MEP1A ENSGALT00000026972 Meprin A subunit alpha precursor (EC 3.4.24.18) (Endopeptidase-2) (N- benzoyl-L-tyrosyl-P-amino-benzoic acid hydrolase subunit alpha) (PABA peptide hydrolase) (PPH alpha). [Source:Uniprot/SWISSPROT;Acc:Q16819]
15.691 -20.83 0.0000363847 206 11 4 27 [+] picture button
CACNA1G ENSGALT00000012332 Voltage-dependent T-type calcium channel subunit alpha-1G (Voltage- gated calcium channel subunit alpha Cav3.1) (Cav3.1c) (NBR13). [Source:Uniprot/SWISSPROT;Acc:O43497]
15.5038 -8.05 0.0000527085 600 15 7 20 [+] picture button
IL18RAP ENSGALT00000027106 Interleukin-18 receptor accessory protein precursor (IL-18 receptor accessory protein) (IL-18RAcP) (Interleukin-18 receptor accessory protein-like) (IL-18Rbeta) (IL-1R accessory protein-like) (IL-1RAcPL) (Accessory protein-like) (AcPL) (IL-1R7) (CD218b an [Source:Uniprot/SWISSPROT;Acc:O95256]
15.8072 -21.93 0.0000654636 600 18 4 29 [+] picture button
DKK3_CHICK ENSGALT00000008904 Dickkopf-related protein 3 precursor (Dkk-3) (Dickkopf-3) (Lens fiber protein CLFEST4). [Source:Uniprot/SWISSPROT;Acc:Q90839]
16.809 -16.23 0.0000787086 446 15 3 25 [+] picture button
FLCN ENSGALT00000007690 Folliculin (Birt-Hogg-Dube syndrome protein) (BHD skin lesion fibrofolliculoma protein). [Source:Uniprot/SWISSPROT;Acc:Q8NFG4]
16.3117 -14.37 0.0000837265 448 12 2 24 [+] picture button
NP_001012551.1 ENSGALT00000016215 chaperonin containing TCP1, subunit 2 (beta) [Source:RefSeq_peptide;Acc:NP_001012551]
16.3733 -7.22 0.000089851 294 11 2 25 [+] picture button
ENSGALT00000035689 NOT ANNOTATED
15.2466 -21.61 0.000104694 600 14 1 21 [+] picture button
NP_990545.1 ENSGALT00000027747 glutamate receptor, ionotrophic, AMPA 4 [Source:RefSeq_peptide;Acc:NP_990545]
16.9329 -23.8 0.000131981 600 11 9 22 [+] picture button
DCAKD ENSGALT00000001283 dephospho-CoA kinase domain containing [Source:RefSeq_peptide;Acc:NP_079095]
15.8795 -22.7 0.000149499 434 19 2 36 [+] picture button
BRWD3 ENSGALT00000011586 Bromodomain and WD repeat domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q6RI45]
18.3556 -19.08 0.000150707 376 13 2 27 [+] picture button
UBL7 ENSGALT00000002121 Ubiquitin-like protein 7 (Ubiquitin-like protein SB132) (Bone marrow stromal cell ubiquitin-like protein) (BMSC-UbP). [Source:Uniprot/SWISSPROT;Acc:Q96S82]
16.8563 -18.11 0.000164849 422 17 4 32 [+] picture button
STAP1_HUMAN ENSGALT00000019102 Signal-transducing adaptor protein 1 (STAP-1) (Stem cell adaptor protein 1) (BCR downstream-signaling protein 1) (Docking protein BRDG1). [Source:Uniprot/SWISSPROT;Acc:Q9ULZ2]
17.1796 -24.89 0.000203515 600 15 3 28 [+] picture button
PTGD2_CHICK ENSGALT00000016938 Glutathione-requiring prostaglandin D synthase (EC 5.3.99.2) (Glutathione-dependent PGD synthetase) (Prostaglandin-H2 D-isomerase) (Hematopoietic prostaglandin D synthase) (H-PGDS). [Source:Uniprot/SWISSPROT;Acc:O73888]
17.8514 -16.95 0.000211319 260 11 3 29 [+] picture button
HS3ST4 ENSGALT00000010161 Heparan sulfate glucosamine 3-O-sulfotransferase 4 (EC 2.8.2.23) (Heparan sulfate D-glucosaminyl 3-O-sulfotransferase 4) (Heparan sulfate 3-O-sulfotransferase 4) (h3-OST-4). [Source:Uniprot/SWISSPROT;Acc:Q9Y661]
16.8635 -20.38 0.000219614 600 14 2 22 [+] picture button
RNF38 ENSGALT00000024714 RING finger protein 38. [Source:Uniprot/SWISSPROT;Acc:Q9H0F5]
18.1084 -17.58 0.000219941 379 19 8 58 [+] picture button
DYNLRB1 ENSGALT00000002964 Dynein light chain roadblock-type 1 (Dynein light chain 2A, cytoplasmic) (Dynein-associated protein Km23) (Bithoraxoid-like protein) (BLP). [Source:Uniprot/SWISSPROT;Acc:Q9NP97]
16.1005 -17 0.000225342 505 12 1 23 [+] picture button
CYB5D2 ENSGALT00000002242 cytochrome b5 domain containing 2 [Source:RefSeq_peptide;Acc:NP_653212]
15.6518 -19.25 0.000225671 396 15 2 37 [+] picture button
WARS2 ENSGALT00000023834 Tryptophanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.2) (Tryptophan--tRNA ligase) (TrpRS) ((Mt)TrpRS). [Source:Uniprot/SWISSPROT;Acc:Q9UGM6]
16.7818 -13.53 0.000238074 600 15 2 20 [+] picture button
NP_001007840.1 ENSGALT00000010902 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide [Source:RefSeq_peptide;Acc:NP_001007840]
15.5175 -16.18 0.000240505 782 11 7 14 [+] picture button
MARCH6 ENSGALT00000021258 E3 ubiquitin-protein ligase MARCH6 (EC 6.3.2.-) (Membrane-associated RING finger protein 6) (Membrane-associated RING-CH protein VI) (MARCH-VI) (RING finger protein 176) (Protein TEB-4) (Doa10 homolog). [Source:Uniprot/SWISSPROT;Acc:O60337]
15.6368 -9.29 0.000243004 636 15 7 19 [+] picture button
NP_001012855.1 ENSGALT00000005941 adaptin-ear-binding coat-associated protein 2 [Source:RefSeq_peptide;Acc:NP_001012855]
15.8813 -16.22 0.000276362 1149 12 2 16 [+] picture button
NP_990165.1 ENSGALT00000028025 folate receptor 1 (adult) [Source:RefSeq_peptide;Acc:NP_990165]
16.5919 -14.8 0.000308404 340 11 1 33 [+] picture button
TFCP2L1 ENSGALT00000019007 Transcription factor CP2-like protein 1 (CP2-related transcriptional repressor 1) (CRTR-1) (Transcription factor LBP-9). [Source:Uniprot/SWISSPROT;Acc:Q9NZI6]
18.0788 -15.19 0.000322012 286 13 3 29 [+] picture button
ANXA2_CHICK ENSGALT00000039485 Annexin A2 (Annexin-2) (Annexin II) (Lipocortin II) (Calpactin I heavy chain) (Chromobindin-8) (p36) (Protein I) (Placental anticoagulant protein IV) (PAP-IV). [Source:Uniprot/SWISSPROT;Acc:P17785]
16.9344 -11.72 0.000322585 483 14 6 24 [+] picture button
CAPN7 ENSGALT00000018846 Calpain-7 (EC 3.4.22.-) (PalB homolog) (PalBH). [Source:Uniprot/SWISSPROT;Acc:Q9Y6W3]
17.9588 -18.74 0.000322675 376 15 3 37 [+] picture button
CXXC5 ENSGALT00000001298 CXXC finger 5 [Source:RefSeq_peptide;Acc:NP_057547]
16.5529 -11.61 0.000335588 575 15 9 33 [+] picture button
ANKRD5 ENSGALT00000014632 Ankyrin repeat domain-containing protein 5. [Source:Uniprot/SWISSPROT;Acc:Q9NU02]
16.3733 -9.01 0.000365348 257 9 4 24 [+] picture button
XR_027038.1 ENSGALT00000024902 PREDICTED: Gallus gallus similar to choline transporter-like protein 1, splice (LOC427301), mRNA. [Source:RefSeq_dna;Acc:XR_027038]
15.4859 -17.05 0.000381888 355 10 3 22 [+] picture button
TAAR5 ENSGALT00000022676 Trace amine-associated receptor 5 (Putative neurotransmitter receptor). [Source:Uniprot/SWISSPROT;Acc:O14804]
15.8487 -11.31 0.000439674 600 12 2 17 [+] picture button
Q1MX18-4 ENSGALT00000009769 INSC_HUMAN Isoform 4 of Q1MX18 - Homo sapiens (Human) [Source:Uniprot/Varsplic;Acc:Q1MX18-4]
15.3499 -9.41 0.000448773 162 7 1 16 [+] picture button
SLC13A1 ENSGALT00000014416 Solute carrier family 13 member 1 (Renal sodium/sulfate cotransporter) (Na(+)/sulfate cotransporter) (hNaSi-1). [Source:Uniprot/SWISSPROT;Acc:Q9BZW2]
16.1938 -13.62 0.000462048 600 13 3 23 [+] picture button
Q8AY19_CHICK ENSGALT00000019370 Transient receptor potential protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8AY19]
16.2596 -14.43 0.000467115 212 10 8 26 [+] picture button
NP_001026259.1 ENSGALT00000026430 tumor suppressing subtransferable candidate 1 [Source:RefSeq_peptide;Acc:NP_001026259]
15.3368 -12.72 0.000470147 478 18 2 30 [+] picture button
K0574_HUMAN ENSGALT00000006290 Uncharacterized protein KIAA0574 (Fragment). [Source:Uniprot/SWISSPROT;Acc:O60320]
15.7001 -19.81 0.000509569 650 12 1 13 [+] picture button
NEUM_CHICK ENSGALT00000030455 Neuromodulin (Axonal membrane protein GAP-43) (Growth-associated protein 43). [Source:Uniprot/SWISSPROT;Acc:P35001]
15.3879 -15.19 0.000527592 600 15 2 23 [+] picture button
PRCC ENSGALT00000021621 Proline-rich protein PRCC (Papillary renal cell carcinoma translocation-associated gene protein). [Source:Uniprot/SWISSPROT;Acc:Q92733]
15.7865 -15.24 0.000557963 571 17 2 27 [+] picture button
AOF2 ENSGALT00000001233 Lysine-specific histone demethylase 1 (EC 1.-.-.-) (Flavin-containing amine oxidase domain-containing protein 2) (BRAF35-HDAC complex protein BHC110). [Source:Uniprot/SWISSPROT;Acc:O60341]
15.7718 -13.92 0.000563313 464 13 3 23 [+] picture button
FA48A_CHICK ENSGALT00000036465 Protein FAM48A. [Source:Uniprot/SWISSPROT;Acc:Q5ZM71]
15.5855 -6.83 0.000597622 395 15 4 29 [+] picture button
MCF2L2 ENSGALT00000014227 Rho family guanine-nucleotide exchange factor [Source:RefSeq_peptide;Acc:NP_055893]
15.9149 -18.2 0.000600551 600 19 1 24 [+] picture button
TXNDC11 ENSGALT00000004992 Thioredoxin domain-containing protein 11 (EF-hand-binding protein 1). [Source:Uniprot/SWISSPROT;Acc:Q6PKC3]
16.4419 -11.88 0.000603814 600 16 8 25 [+] picture button
PAK2 ENSGALT00000010372 Serine/threonine-protein kinase PAK 2 (EC 2.7.11.1) (p21-activated kinase 2) (PAK-2) (PAK65) (Gamma-PAK) (S6/H4 kinase). [Source:Uniprot/SWISSPROT;Acc:Q13177]
16.4142 -12.56 0.000604209 463 15 3 22 [+] picture button
MRPL17 ENSGALT00000004103 39S ribosomal protein L17, mitochondrial precursor (L17mt) (MRP-L17) (LYST-interacting protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9NRX2]
15.5878 -9.09 0.000607978 318 15 2 38 [+] picture button
Q9NQ15_HUMAN ENSGALT00000026225 OTTHUMP00000016676 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9NQ15]
15.5485 -16.38 0.000612437 600 13 1 21 [+] picture button
NP_872368.2 ENSGALT00000038512 CDNA FLJ39743 fis, clone SMINT2017319. [Source:Uniprot/SPTREMBL;Acc:Q8N8A8]
16.2838 -17.57 0.000612489 389 11 2 21 [+] picture button
DBX1 ENSGALT00000006317 developing brain homeobox 1 [Source:RefSeq_peptide;Acc:NP_001025036]
15.5987 -21.57 0.000623027 600 13 2 26 [+] picture button
SLU7_CHICK ENSGALT00000002279 Pre-mRNA-splicing factor SLU7. [Source:Uniprot/SWISSPROT;Acc:Q5ZIG2]
16.4741 -19.46 0.000624741 475 15 2 30 [+] picture button
PIK3R2 ENSGALT00000005424 Phosphatidylinositol 3-kinase regulatory subunit beta (PI3-kinase p85- subunit beta) (PtdIns-3-kinase p85-beta). [Source:Uniprot/SWISSPROT;Acc:O00459]
16.5782 -13.15 0.000627596 436 15 7 29 [+] picture button
ITSN1 ENSGALT00000025788 Intersectin-1 (SH3 domain-containing protein 1A) (SH3P17). [Source:Uniprot/SWISSPROT;Acc:Q15811]
15.2622 -17.8 0.000629512 533 17 1 29 [+] picture button
CCDC90B ENSGALT00000027888 coiled-coil domain containing 90B [Source:RefSeq_peptide;Acc:NP_068597]
15.1172 -14.15 0.000629849 367 15 3 31 [+] picture button

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Download table: GFF TXT
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