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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gallus gallus and gga-miR-9*

542 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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NP_001006387.1 ENSGALT00000024655 transcription elongation factor A 1 [Source:RefSeq_peptide;Acc:NP_001006387]
17.0672 -10.91 7.08396e-07 500 9 3 19 [+] picture button
NP_989824.1 ENSGALT00000012260 dihydropyrimidinase-like 3 [Source:RefSeq_peptide;Acc:NP_989824]
17.1711 -12.08 1.93962e-06 492 16 7 28 [+] picture button
CETN3 ENSGALT00000023609 Centrin-3. [Source:Uniprot/SWISSPROT;Acc:O15182]
16.7961 -14.76 2.89375e-06 360 14 7 38 [+] picture button
LRRTM1 ENSGALT00000025729 Leucine-rich repeat transmembrane neuronal protein 1 precursor. [Source:Uniprot/SWISSPROT;Acc:Q86UE6]
17.7323 -12.18 5.78593e-06 600 15 10 23 [+] picture button
NP_056996.2 ENSGALT00000026112 C8orfK32 protein (C8ORFK32), mRNA [Source:RefSeq_dna;Acc:NM_015912]
15.8874 -10.49 4.97091e-05 600 13 2 28 [+] picture button
NP_989788.1 ENSGALT00000022055 granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3) [Source:RefSeq_peptide;Acc:NP_989788]
17.2722 -13.04 7.42084e-05 316 13 1 22 [+] picture button
Q6T5C1_CHICK ENSGALT00000037154 Pituitary glycoprotein hormone alpha subunit (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6T5C1]
15.8888 -14.05 7.43559e-05 190 9 5 24 [+] picture button
KIAA0133 ENSGALT00000018087 Uncharacterized protein KIAA0133. [Source:Uniprot/SWISSPROT;Acc:Q14146]
15.7618 -20.02 9.04126e-05 352 15 2 31 [+] picture button
NP_001012971.1 ENSGALT00000004434 hypothetical protein LOC429060 [Source:RefSeq_peptide;Acc:NP_001012971]
17.2835 -11.86 0.000124302 430 12 4 22 [+] picture button
KIAA1217 ENSGALT00000012598 KIAA1217 (KIAA1217), mRNA [Source:RefSeq_dna;Acc:NM_019590]
17.5231 -17.82 0.00012532 600 16 6 27 [+] picture button
ITB1_CHICK ENSGALT00000011573 Integrin beta-1 precursor (CSAT antigen) (JG22 antigen) (RGD- receptor). [Source:Uniprot/SWISSPROT;Acc:P07228]
16.0413 -14.51 0.000149614 1155 9 4 11 [+] picture button
SLC26A7 ENSGALT00000025669 solute carrier family 26, member 7 isoform a [Source:RefSeq_peptide;Acc:NP_439897]
16.234 -13.79 0.000189848 600 16 2 22 [+] picture button
Q5ZMN3_CHICK ENSGALT00000023492 Hypothetical protein. [Source:Uniprot/SPTREMBL;Acc:Q5ZMN3]
16.8798 -12.17 0.000223974 600 8 3 14 [+] picture button
CASK ENSGALT00000026163 Peripheral plasma membrane protein CASK (EC 2.7.11.1) (hCASK) (Calcium/calmodulin-dependent serine protein kinase) (Lin-2 homolog). [Source:Uniprot/SWISSPROT;Acc:O14936]
17.5817 -13.79 0.000227174 330 10 11 25 [+] picture button
ACTL6A ENSGALT00000014749 Actin-like protein 6A (53 kDa BRG1-associated factor A) (Actin-related protein Baf53a) (ArpNbeta). [Source:Uniprot/SWISSPROT;Acc:O96019]
16.7347 -15.9 0.000253102 600 16 8 23 [+] picture button
INSL5 ENSGALT00000032925 Insulin-like peptide INSL5 precursor (Insulin-like peptide 5) [Contains: Insulin-like peptide INSL5 B chain; Insulin-like peptide INSL5 A chain]. [Source:Uniprot/SWISSPROT;Acc:Q9Y5Q6]
16.6288 -12.23 0.000289734 600 16 3 20 [+] picture button
LOC646799 ENSGALT00000027577 NOT ANNOTATED
16.2566 -12.9 0.000293083 356 15 2 35 [+] picture button
ZNF462 ENSGALT00000024915 Zinc finger protein 462. [Source:Uniprot/SWISSPROT;Acc:Q96JM2]
17.7284 -18.19 0.000304062 600 14 6 22 [+] picture button
DMRT3 ENSGALT00000016523 Doublesex and mab-3-related transcription factor 3. [Source:Uniprot/SWISSPROT;Acc:Q9NQL9]
15.8874 -16.48 0.000307891 600 11 8 19 [+] picture button
WIPI2_CHICK ENSGALT00000007252 WD repeat domain phosphoinositide-interacting protein 2 (WIPI-2). [Source:Uniprot/SWISSPROT;Acc:Q5ZHN3]
15.7329 -9.05 0.000308211 607 11 2 16 [+] picture button
APRIN_CHICK ENSGALT00000027571 Androgen-induced proliferation inhibitor (Sister chromatid cohesion protein PDS5 homolog B). [Source:Uniprot/SWISSPROT;Acc:Q5F3U9]
16.6889 -12.39 0.000328735 317 14 5 39 [+] picture button
RSBN1L ENSGALT00000013555 round spermatid basic protein 1-like [Source:RefSeq_peptide;Acc:NP_940869]
16.5229 -10.95 0.000331183 600 14 7 33 [+] picture button
NP_001013648.1 ENSGALT00000025043 similar to RIKEN cDNA 1700011J18 (LOC286187), mRNA [Source:RefSeq_dna;Acc:NM_001013626]
17.9327 -16.64 0.000334236 320 9 1 23 [+] picture button
A0M8U3_CHICK ENSGALT00000015222 GASZ. [Source:Uniprot/SPTREMBL;Acc:A0M8U3]
16.5229 -11.43 0.000353735 600 15 1 24 [+] picture button
FHL2 ENSGALT00000027119 Four and a half LIM domains protein 2 (FHL-2) (Skeletal muscle LIM- protein 3) (SLIM 3) (LIM domain protein DRAL). [Source:Uniprot/SWISSPROT;Acc:Q14192]
16.704 -12.17 0.000385703 316 13 3 33 [+] picture button
SORCS1 ENSGALT00000013796 VPS10 domain-containing receptor SorCS1 precursor (hSorCS). [Source:Uniprot/SWISSPROT;Acc:Q8WY21]
18.9751 -17.87 0.00039897 278 9 8 29 [+] picture button
HOMER2 ENSGALT00000009667 Homer protein homolog 2 (Homer-2) (Cupidin). [Source:Uniprot/SWISSPROT;Acc:Q9NSB8]
16.9616 -16.37 0.000431483 350 16 5 46 [+] picture button
TMEM185A ENSGALT00000014881 Transmembrane protein 185A (Protein FAM11A). [Source:Uniprot/SWISSPROT;Acc:Q8NFB2]
16.0031 -6.73 0.00043919 176 10 3 32 [+] picture button
Q9IAA6_CHICK ENSGALT00000016332 Molybdenum cofactor synthesis-step 1 protein B splice type I (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9IAA6]
16.3111 -15.3 0.000476079 600 14 1 19 [+] picture button
RFXAP ENSGALT00000030112 Regulatory factor X-associated protein (RFX DNA-binding complex 36 kDa subunit) (RFX-associated protein). [Source:Uniprot/SWISSPROT;Acc:O00287]
18.2031 -14.16 0.000479299 349 16 2 35 [+] picture button
GALNT13 ENSGALT00000020475 Polypeptide N-acetylgalactosaminyltransferase 13 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 13) (UDP- GalNAc:polypeptide N-acetylgalactosaminyltransferase 13) (Polypeptide GalNAc transferase 13) (GalNAc-T13) (pp-GaNTase 13). [Source:Uniprot/SWISSPROT;Acc:Q8IUC8]
16.417 -19.52 0.000541967 600 6 1 9 [+] picture button
NP_056993.2 ENSGALT00000026557 neuroblastoma-amplified protein [Source:RefSeq_peptide;Acc:NP_056993]
17.476 -14.2 0.000558563 402 10 3 20 [+] picture button
MK_CHICK ENSGALT00000032647 Midkine precursor (Retinoic acid-induced heparin-binding protein) (RI- HB). [Source:Uniprot/SWISSPROT;Acc:P24052]
16.2317 -10.85 0.000564584 318 12 2 33 [+] picture button
RPS24 ENSGALT00000007776 40S ribosomal protein S24. [Source:Uniprot/SWISSPROT;Acc:P62847]
18.8608 -17.83 0.000578703 239 10 1 27 [+] picture button
NP_001006293.1 ENSGALT00000011297 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:RefSeq_peptide;Acc:NP_001006293]
16.2317 -11.34 0.000589635 199 7 2 19 [+] picture button
ENSGALT00000018238 hypothetical protein LOC492502 [Source:RefSeq_peptide;Acc:NP_001007375]hypothetical protein LOC492502 [Source:RefSeq_peptide;Acc:NP_001007375] BY ORTHOLOGY TO:ENSDART00000059623
16.764 -12.09 0.000608664 600 13 7 21 [+] picture button
Q91415_CHICK ENSGALT00000017677 Beta 8 integrin (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q91415]
17.0264 -10.25 0.000615051 600 15 7 24 [+] picture button
ENSGALT00000008243 Homolog of Homo sapiens "N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 [Source:UniGene;Acc:Hs.225129]"Homolog of Homo sapiens "N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 [Source:UniGene;Acc:Hs.225129]" BY ORTHOLOGY TO:SINFRUT00000182260
16.0218 -9.75 0.000664653 600 18 2 23 [+] picture button
ENSGALT00000001617 Homolog of Homo sapiens "PREDICTED "similar to RIKEN cDNA B230396O12 [Source:IPI;Acc:IPI00376181]"Homolog of Homo sapiens "PREDICTED "similar to RIKEN cDNA B230396O12 [Source:IPI;Acc:IPI00376181]" BY ORTHOLOGY TO:SINFRUT00000140504
16.8406 -9.76 0.000787511 600 19 1 23 [+] picture button
TOP2A_CHICK ENSGALT00000006249 DNA topoisomerase 2-alpha (EC 5.99.1.3) (DNA topoisomerase II, alpha isozyme). [Source:Uniprot/SWISSPROT;Acc:O42130]
15.9933 -10.4 0.000803536 600 13 1 17 [+] picture button
NP_996871.1 ENSGALT00000011483 growth differentiation factor 9 [Source:RefSeq_peptide;Acc:NP_996871]
16.0031 -15.23 0.000829795 281 13 4 52 [+] picture button
ENPEP ENSGALT00000019779 Glutamyl aminopeptidase (EC 3.4.11.7) (EAP) (Aminopeptidase A) (APA) (Differentiation antigen gp160) (CD249 antigen). [Source:Uniprot/SWISSPROT;Acc:Q07075]
16.4919 -11.35 0.000841436 451 16 2 31 [+] picture button
RAPGEF5 ENSGALT00000017745 Rap guanine nucleotide exchange factor 5 (Guanine nucleotide exchange factor for Rap1) (Related to Epac) (Repac) (M-Ras-regulated Rap GEF) (MR-GEF). [Source:Uniprot/SWISSPROT;Acc:Q92565]
16.7706 -13.38 0.000844811 588 20 4 37 [+] picture button
Q9YHT1_CHICK ENSGALT00000021508 Succinate dehydrogenase Fp subunit (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9YHT1]
16.6734 -13.78 0.000850894 341 14 2 28 [+] picture button
ARP6_CHICK ENSGALT00000018851 Actin-related protein 6 (gArp6) (gARPX). [Source:Uniprot/SWISSPROT;Acc:Q9DEE9]
17.832 -11.4 0.0010124 147 6 2 17 [+] picture button
RADI_CHICK ENSGALT00000021058 Radixin. [Source:Uniprot/SWISSPROT;Acc:Q9PU45]
18.0093 -15.1 0.00101316 406 16 3 36 [+] picture button
RAN_CHICK ENSGALT00000039717 GTP-binding nuclear protein Ran (GTPase Ran) (Ras-like protein TC4). [Source:Uniprot/SWISSPROT;Acc:P42558]
15.7682 -12.71 0.00103643 532 15 6 36 [+] picture button
RA54B_CHICK ENSGALT00000025712 DNA repair and recombination protein RAD54B (EC 3.6.1.-) (RAD54 homolog B). [Source:Uniprot/SWISSPROT;Acc:Q9DG67]
17.2222 -11.32 0.00110677 614 19 7 25 [+] picture button
CXorf22 ENSGALT00000026231 Uncharacterized protein CXorf22. [Source:Uniprot/SWISSPROT;Acc:Q6ZTR5]
17.2643 -20.26 0.0011143 600 14 2 18 [+] picture button
ARPC3 ENSGALT00000006056 Actin-related protein 2/3 complex subunit 3 (ARP2/3 complex 21 kDa subunit) (p21-ARC). [Source:Uniprot/SWISSPROT;Acc:O15145]
15.7427 -12.07 0.00113884 475 14 4 28 [+] picture button

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Download table: GFF TXT
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